BLASTX nr result
ID: Cheilocostus21_contig00051009
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00051009
(881 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration... 360 e-110
gb|AAW30012.1| polyprotein, partial [Citrus yellow mosaic virus] 332 e-110
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1] 358 e-109
gb|ANK58548.1| polyprotein [Fig badnavirus 1] 357 e-109
gb|ANK58539.1| polyprotein [Fig badnavirus 1] 357 e-109
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] >gi|333493962... 357 e-109
gb|ANK58542.1| polyprotein [Fig badnavirus 1] 354 e-108
gb|ANK58536.1| polyprotein [Fig badnavirus 1] 354 e-108
gb|ANK58545.1| polyprotein [Fig badnavirus 1] 353 e-107
ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discolor... 351 e-107
gb|AKA45798.1| polyprotein [Taro bacilliform CH virus] 348 e-106
ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus] >gi|... 347 e-105
gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus] 345 e-105
gb|AHG32726.1| ORF3, partial [Dioscorea rotundata] 325 e-104
ref|YP_009229919.1| polyprotein [Blackberry Virus F] >gi|6892539... 343 e-104
gb|ATZ69518.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 342 e-104
gb|ATZ69522.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 342 e-104
gb|ATZ69526.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 341 e-103
gb|AHG32725.1| ORF3, partial [Dioscorea rotundata] 337 e-103
gb|PKU61844.1| RNA-directed DNA polymerase [Dendrobium catenatum] 320 e-103
>gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1789
Score = 360 bits (925), Expect = e-110
Identities = 171/258 (66%), Positives = 215/258 (83%)
Frame = -3
Query: 774 SRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRIEGNIVTFYK 595
++ KL+ G+M IG N+FRIP+TYS PL +GD IQMI+GCNFIR+M GGVRIEGN VTFYK
Sbjct: 1141 TKKKLKYGRMMIGMNSFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYK 1200
Query: 594 GVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIMKRLSPLLKELEEQG 415
+T I T+P VT S+EE E+ +EEYLQ+QE++ ++G + +KR PL++EL+E G
Sbjct: 1201 NLTRISTSPEVTVN-SLEEEEVCEEEYLQVQEMVICNIGESRESFLKRFKPLIEELKEAG 1259
Query: 414 FIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHIQALRTIGVIRES 235
+IGENP QHWSKN +LC LD+KNPDF+IED+PLK +TPQ KE+F +H++AL + VIR S
Sbjct: 1260 YIGENPLQHWSKNGVLCQLDIKNPDFIIEDRPLKSVTPQMKESFKKHVKALLDLRVIRPS 1319
Query: 234 KSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYSLPGINTILRKVS 55
KSRHRTTA++V SGTT++P TG+E KGKERMVFNYKRLND THKDQYSLPGINTIL+++
Sbjct: 1320 KSRHRTTAMLVNSGTTVDPKTGKETKGKERMVFNYKRLNDITHKDQYSLPGINTILKRIG 1379
Query: 54 NSKIYSKFDLKSGFHQVA 1
NSKI+SKFDLKSGFHQVA
Sbjct: 1380 NSKIFSKFDLKSGFHQVA 1397
>gb|AAW30012.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 357
Score = 332 bits (851), Expect = e-110
Identities = 160/270 (59%), Positives = 210/270 (77%), Gaps = 3/270 (1%)
Frame = -3
Query: 801 FSPFTSKTTSRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRI 622
FS SK + KL+AGKM I ++ FRIPY YSF +++GD IQ+ILGCNFIRSM GGVR+
Sbjct: 30 FSGINSKQQVKQKLKAGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRL 89
Query: 621 EGNIVTFYKGVTTIET---TPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIMKR 451
EGN VTFYK +T+I T P + +E E + +E+ IQE++ +S P H ++
Sbjct: 90 EGNTVTFYKQITSINTRLAAPLLKQEKEEKEEEFNLDEHRLIQEMVAYSTERPFVHFQQK 149
Query: 450 LSPLLKELEEQGFIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHI 271
+ L++EL+ QG+IGE P ++W+KN+++CHLD+KN D VIED+PLKH+TPQ +E+F +H+
Sbjct: 150 FAGLIQELKAQGYIGEEPMKYWAKNKVVCHLDIKNSDMVIEDRPLKHVTPQMEESFRKHV 209
Query: 270 QALRTIGVIRESKSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYS 91
+AL IG IR SKSRHRTTAI+V SGT+I+P+TG+EVKGKERMVFNYKRLND T+KDQYS
Sbjct: 210 EALLKIGAIRPSKSRHRTTAIMVSSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQYS 269
Query: 90 LPGINTILRKVSNSKIYSKFDLKSGFHQVA 1
LPGI TIL+++ S I+SKFDLKSGFHQVA
Sbjct: 270 LPGIQTILQRLKGSTIFSKFDLKSGFHQVA 299
>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
Length = 1846
Score = 358 bits (918), Expect = e-109
Identities = 171/272 (62%), Positives = 216/272 (79%), Gaps = 2/272 (0%)
Frame = -3
Query: 810 TYL--FSPFTSKTTSRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMK 637
TYL FS S T+ KL+ G+M IG+N FRIPYTYSFP+++ D +QMI+GCNFIR+M
Sbjct: 1107 TYLVRFSGVNSTMTANKKLKGGRMFIGENMFRIPYTYSFPIKMEDGVQMIVGCNFIRAMY 1166
Query: 636 GGVRIEGNIVTFYKGVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIM 457
GGVRIEGN+VTFYK +T I T+ ++E ++D EE QIQE +Y ++G + +
Sbjct: 1167 GGVRIEGNVVTFYKNLTVINTSQSTEIARMLQE-DVDDEELWQIQEAVYINIGKSRESFL 1225
Query: 456 KRLSPLLKELEEQGFIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTR 277
KR L+ +L+E G+IGENP QHW KN+++C LD+KNPDF+IEDKPLKHLTP KE+F R
Sbjct: 1226 KRFEALINQLKEAGYIGENPLQHWEKNRVVCQLDIKNPDFIIEDKPLKHLTPSMKESFRR 1285
Query: 276 HIQALRTIGVIRESKSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQ 97
H +AL +GVIR SKSRHRTTA+IV+SGT ++PVTG+E +GKERMVFNYKRLND T+KDQ
Sbjct: 1286 HTEALLKLGVIRPSKSRHRTTAMIVQSGTAVDPVTGKETRGKERMVFNYKRLNDLTNKDQ 1345
Query: 96 YSLPGINTILRKVSNSKIYSKFDLKSGFHQVA 1
YSLPGI+TI++KV NS+IYSKFDLKSGFHQVA
Sbjct: 1346 YSLPGISTIMKKVGNSRIYSKFDLKSGFHQVA 1377
Score = 60.1 bits (144), Expect = 3e-06
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = -2
Query: 880 AVFQRKMDLCFKGTEQFIAVYIDDILVFSIHFQDNIQN 767
AVFQRKMD CFKGTE FIAVYIDDILVFS + QD+ ++
Sbjct: 1409 AVFQRKMDHCFKGTEDFIAVYIDDILVFSENEQDHARH 1446
>gb|ANK58548.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 357 bits (915), Expect = e-109
Identities = 173/258 (67%), Positives = 214/258 (82%)
Frame = -3
Query: 774 SRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRIEGNIVTFYK 595
++ KL+ G+M IG N FRIP+TYS PL +GD IQMI+GCNFIR+M GGVRIEGN VTFYK
Sbjct: 1126 TKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYK 1185
Query: 594 GVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIMKRLSPLLKELEEQG 415
+T I T+P V+ S++E E+ +EEYLQ+QE++ ++G + +K+ PLL+EL+E G
Sbjct: 1186 NLTRISTSPEVSVN-SLDE-EVCEEEYLQVQEMVICNIGESRESFLKKFRPLLEELKEAG 1243
Query: 414 FIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHIQALRTIGVIRES 235
FIGENP QHW KN ILC LD+KNPDF+IED+PLK+LTPQ KE+F +HI+ L +GVIR S
Sbjct: 1244 FIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTPQMKESFKKHIKVLLDLGVIRAS 1303
Query: 234 KSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYSLPGINTILRKVS 55
KSRHRTTA++V SGTT++P TG+E+K KERMVFNYKRLND THKDQYSLPGINTIL+KV
Sbjct: 1304 KSRHRTTAMLVNSGTTVDPKTGKEIKRKERMVFNYKRLNDITHKDQYSLPGINTILKKVG 1363
Query: 54 NSKIYSKFDLKSGFHQVA 1
NSKI+SKFDLKSGFHQVA
Sbjct: 1364 NSKIFSKFDLKSGFHQVA 1381
>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 357 bits (915), Expect = e-109
Identities = 173/258 (67%), Positives = 214/258 (82%)
Frame = -3
Query: 774 SRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRIEGNIVTFYK 595
++ KL+ G+M IG N FRIP+TYS PL +GD IQMI+GCNFIR+M GGVRIEGN VTFYK
Sbjct: 1126 TKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYK 1185
Query: 594 GVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIMKRLSPLLKELEEQG 415
+T I T+P V+ S++E E+ +EEYLQ+QE++ ++G + +K+ PLL+EL+E G
Sbjct: 1186 NLTRISTSPEVSVN-SLDE-EVCEEEYLQVQEMVICNIGESRESFLKKFRPLLEELKEAG 1243
Query: 414 FIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHIQALRTIGVIRES 235
FIGENP QHW KN ILC LD+KNPDF+IED+PLK+LT Q KE+F +HI+ L +GVIR S
Sbjct: 1244 FIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTSQMKESFKKHIKVLLDLGVIRAS 1303
Query: 234 KSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYSLPGINTILRKVS 55
KSRHRTTA++V SGTT++P TG+E+KGKERMVFNYKRLND THKDQYSLPGINTIL+KV
Sbjct: 1304 KSRHRTTAMLVNSGTTVDPKTGKEIKGKERMVFNYKRLNDITHKDQYSLPGINTILKKVG 1363
Query: 54 NSKIYSKFDLKSGFHQVA 1
NSKI+SKFDLKSGFHQVA
Sbjct: 1364 NSKIFSKFDLKSGFHQVA 1381
>ref|YP_006273075.1| polyprotein [Fig badnavirus 1]
gb|AEF56561.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 357 bits (915), Expect = e-109
Identities = 173/258 (67%), Positives = 214/258 (82%)
Frame = -3
Query: 774 SRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRIEGNIVTFYK 595
++ KL+ G+M IG N FRIP+TYS PL +GD IQMI+GCNFIR+M GGVRIEGN VTFYK
Sbjct: 1126 TKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYK 1185
Query: 594 GVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIMKRLSPLLKELEEQG 415
+T I T+P V+ S++E E+ +EEYLQ+QE++ ++G + +K+ PLL+EL+E G
Sbjct: 1186 NLTRISTSPEVSVN-SLDE-EVCEEEYLQVQEMVICNIGESRKSFLKKFRPLLEELKEAG 1243
Query: 414 FIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHIQALRTIGVIRES 235
FIGENP QHW KN ILC LD+KNPDF+IED+PLK+LTPQ KE+F +HI+ L +GVIR S
Sbjct: 1244 FIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTPQMKESFKKHIKVLLDLGVIRAS 1303
Query: 234 KSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYSLPGINTILRKVS 55
KSRHRTTA++V SGTT++P TG+E+K KERMVFNYKRLND THKDQYSLPGINTIL+KV
Sbjct: 1304 KSRHRTTAMLVNSGTTVDPKTGKEIKRKERMVFNYKRLNDITHKDQYSLPGINTILKKVG 1363
Query: 54 NSKIYSKFDLKSGFHQVA 1
NSKI+SKFDLKSGFHQVA
Sbjct: 1364 NSKIFSKFDLKSGFHQVA 1381
>gb|ANK58542.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 354 bits (909), Expect = e-108
Identities = 172/258 (66%), Positives = 213/258 (82%)
Frame = -3
Query: 774 SRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRIEGNIVTFYK 595
++ KL+ G+M IG N FRIP+TYS PL +GD IQMI+GCNFIR+M GGVRIEGN VTFYK
Sbjct: 1126 TKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYK 1185
Query: 594 GVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIMKRLSPLLKELEEQG 415
+T I T+P V+ S++E E+ +EEYLQ+QE++ ++G + +K+ PLL+EL+E G
Sbjct: 1186 NLTRISTSPEVSVN-SLDE-EVCEEEYLQVQEMVICNIGESRESFLKKFRPLLEELKEAG 1243
Query: 414 FIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHIQALRTIGVIRES 235
FIGENP QHW KN ILC LD+KNPDF+IED+PLK+LT Q KE+F +HI+ L +GVIR S
Sbjct: 1244 FIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTSQMKESFKKHIKVLLDLGVIRAS 1303
Query: 234 KSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYSLPGINTILRKVS 55
KSRHRTTA++V SGTT++P TG+E+KGKERMVFNYKRLND THKDQYSLPGINTIL+KV
Sbjct: 1304 KSRHRTTAMLVNSGTTVDPKTGKEIKGKERMVFNYKRLNDITHKDQYSLPGINTILKKVG 1363
Query: 54 NSKIYSKFDLKSGFHQVA 1
NS I+SKFDLKSGFHQVA
Sbjct: 1364 NSTIFSKFDLKSGFHQVA 1381
>gb|ANK58536.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 354 bits (909), Expect = e-108
Identities = 172/258 (66%), Positives = 213/258 (82%)
Frame = -3
Query: 774 SRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRIEGNIVTFYK 595
++ KL+ G+M IG N FRIP+TYS PL +GD IQMI+GCNFIR+M GGVRIEGN VTFYK
Sbjct: 1126 TKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYK 1185
Query: 594 GVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIMKRLSPLLKELEEQG 415
+T I T+P V+ S++E E+ +EEYLQ+QE++ ++G + +K+ PLL+EL+E G
Sbjct: 1186 NLTRISTSPEVSVN-SLDE-EVCEEEYLQVQEMVICNIGESRESFLKKFRPLLEELKEAG 1243
Query: 414 FIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHIQALRTIGVIRES 235
FIGENP QHW KN ILC LD+KNPDF+IED+PLK+LTPQ KE+F +HI+ L +GVIR S
Sbjct: 1244 FIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTPQMKESFKKHIKVLLDLGVIRAS 1303
Query: 234 KSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYSLPGINTILRKVS 55
KSRHRTTA++V SGTT++P TG+E+K KERMVFNYKRLND THKDQYSLPGINTIL+KV
Sbjct: 1304 KSRHRTTAMLVNSGTTVDPKTGKEIKRKERMVFNYKRLNDITHKDQYSLPGINTILKKVG 1363
Query: 54 NSKIYSKFDLKSGFHQVA 1
NS I+SKFDLKSGFHQVA
Sbjct: 1364 NSTIFSKFDLKSGFHQVA 1381
>gb|ANK58545.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 353 bits (905), Expect = e-107
Identities = 171/258 (66%), Positives = 213/258 (82%)
Frame = -3
Query: 774 SRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRIEGNIVTFYK 595
++ KL+ G+M IG N FRIP+TYS PL +GD IQMI+GCNFIR+M GGVRIEGN VTFYK
Sbjct: 1126 TKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYK 1185
Query: 594 GVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIMKRLSPLLKELEEQG 415
+T I T+P V+ S++E E+ +EEYLQ+QE++ ++G + +K+ PLL+EL+E G
Sbjct: 1186 NLTRISTSPEVSVN-SLDE-EVCEEEYLQVQEMVICNIGESRESFLKKFRPLLEELKEAG 1243
Query: 414 FIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHIQALRTIGVIRES 235
FIGENP QHW KN ILC LD+KNPDF+IED+PLK+LTPQ KE+F +HI+ L +GVIR S
Sbjct: 1244 FIGENPLQHWKKNGILCQLDIKNPDFIIEDRPLKNLTPQMKESFKKHIKVLLDLGVIRAS 1303
Query: 234 KSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYSLPGINTILRKVS 55
KSRHRTTA++V SGTT++P TG+E+K +ERMVFNYKRLND THKDQYSLPGINTIL+KV
Sbjct: 1304 KSRHRTTAMLVNSGTTVDPKTGKEIKREERMVFNYKRLNDITHKDQYSLPGINTILKKVG 1363
Query: 54 NSKIYSKFDLKSGFHQVA 1
NS I+SKFDLKSGFHQVA
Sbjct: 1364 NSTIFSKFDLKSGFHQVA 1381
>ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
emb|CDN68224.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1830
Score = 351 bits (901), Expect = e-107
Identities = 166/258 (64%), Positives = 212/258 (82%)
Frame = -3
Query: 774 SRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRIEGNIVTFYK 595
++ KL+ G+M IG N+FRIP+TYS PL +GD IQMI+GCNFIR+M GGVRIEGN VTFYK
Sbjct: 1105 TKKKLKYGRMMIGMNSFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYK 1164
Query: 594 GVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIMKRLSPLLKELEEQG 415
+T I T+P V+ ++ E E+ +EEYLQIQ+++ ++G + +K+ PL++E +E G
Sbjct: 1165 NLTKISTSPEVSV--NVLEEEVCEEEYLQIQDMVVCNIGESRESFLKKFKPLIEEFQEAG 1222
Query: 414 FIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHIQALRTIGVIRES 235
+IGENP QHW KN +LC LD+KNPDF+IED+PLK +TPQ KE+F RH++AL + VIR S
Sbjct: 1223 YIGENPLQHWEKNGVLCQLDIKNPDFIIEDRPLKSVTPQMKESFKRHVKALLDLKVIRPS 1282
Query: 234 KSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYSLPGINTILRKVS 55
KSRHRTTA++V SGTT++P TG+E KGKERMVFNYKRLND THKDQYSLPGINTIL+++
Sbjct: 1283 KSRHRTTAMLVNSGTTVDPKTGKETKGKERMVFNYKRLNDITHKDQYSLPGINTILKRIG 1342
Query: 54 NSKIYSKFDLKSGFHQVA 1
NSKI+SKFDLKSGFHQVA
Sbjct: 1343 NSKIFSKFDLKSGFHQVA 1360
>gb|AKA45798.1| polyprotein [Taro bacilliform CH virus]
Length = 1803
Score = 348 bits (892), Expect = e-106
Identities = 167/267 (62%), Positives = 208/267 (77%)
Frame = -3
Query: 801 FSPFTSKTTSRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRI 622
FS SK ++ KLR GKM IGDN FRIPYTY FP++LGD IQMILGCNFIRSM+GGVRI
Sbjct: 1138 FSGINSKVSTNKKLRYGKMIIGDNAFRIPYTYVFPMQLGDDIQMILGCNFIRSMQGGVRI 1197
Query: 621 EGNIVTFYKGVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIMKRLSP 442
EG+ V FYK VT I+T V +IEELEL++EEY+ I + +
Sbjct: 1198 EGDTVAFYKNVTQIQTQQTVPIIAAIEELELEEEEYISIAAICAYGGMEISSPFQFSYQK 1257
Query: 441 LLKELEEQGFIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHIQAL 262
L++EL++ G+IG++P ++WS N+I C L++KNPD IED+PLKH++PQ + ++ RH +A+
Sbjct: 1258 LIQELKDMGYIGDDPMKYWSSNKITCQLEIKNPDLTIEDRPLKHISPQMEASYRRHTEAV 1317
Query: 261 RTIGVIRESKSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYSLPG 82
+G IR SKS+HRTTAIIV SGTTI+P+TG+EV+GKERMVFNYKRLNDNTHKDQYSLPG
Sbjct: 1318 LKLGTIRPSKSKHRTTAIIVNSGTTIDPITGKEVRGKERMVFNYKRLNDNTHKDQYSLPG 1377
Query: 81 INTILRKVSNSKIYSKFDLKSGFHQVA 1
INTI++KV NSKIYSKFDLKSGFHQVA
Sbjct: 1378 INTIIQKVGNSKIYSKFDLKSGFHQVA 1404
>ref|YP_009130664.1| polyprotein [Taro bacilliform CH virus]
gb|AKA45804.1| polyprotein [Taro bacilliform CH virus]
Length = 1803
Score = 347 bits (891), Expect = e-105
Identities = 167/266 (62%), Positives = 208/266 (78%)
Frame = -3
Query: 798 SPFTSKTTSRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRIE 619
S SK ++ KLR GKM IGDN FRIPYTY FP++LGD IQMILGCNFIRSM+GGVRIE
Sbjct: 1139 SGINSKVSTNKKLRYGKMIIGDNAFRIPYTYVFPMQLGDDIQMILGCNFIRSMQGGVRIE 1198
Query: 618 GNIVTFYKGVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIMKRLSPL 439
G+ VTFYK VT I+T V +IEELEL++EEY+ I + + L
Sbjct: 1199 GDTVTFYKNVTQIQTQQTVPIIAAIEELELEEEEYISIATICAYGGMEISSPFQFSYQKL 1258
Query: 438 LKELEEQGFIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHIQALR 259
++EL++ G+IG++P ++WS N+I C L++KNPD IED+PLKH++PQ + ++ RH +A+
Sbjct: 1259 IQELKDMGYIGDDPMKYWSSNKITCQLEIKNPDLTIEDRPLKHISPQMEASYRRHTEAVL 1318
Query: 258 TIGVIRESKSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYSLPGI 79
+G IR SKS+HRTTAIIV SGTTI+P+TG+EV+GKERMVFNYKRLNDNTHKDQYSLPGI
Sbjct: 1319 KLGTIRPSKSKHRTTAIIVNSGTTIDPITGKEVRGKERMVFNYKRLNDNTHKDQYSLPGI 1378
Query: 78 NTILRKVSNSKIYSKFDLKSGFHQVA 1
NTI++KV NSKIYSKFDLKSGFHQVA
Sbjct: 1379 NTIIQKVGNSKIYSKFDLKSGFHQVA 1404
>gb|ASA40123.1| ORF3 [Dioscorea bacilliform virus]
Length = 1946
Score = 345 bits (886), Expect = e-105
Identities = 169/267 (63%), Positives = 213/267 (79%)
Frame = -3
Query: 801 FSPFTSKTTSRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRI 622
F+ S + S K++AG M IG++ FRIP+TY FPL+L D IQMI+GCNFIR+M GG+RI
Sbjct: 1313 FTGVNSTSHSNKKMKAGVMKIGEHFFRIPFTYIFPLKLDD-IQMIIGCNFIRAMAGGIRI 1371
Query: 621 EGNIVTFYKGVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIMKRLSP 442
EGN VTFYK VTTI+T P+ +A SIEEL+L++EE++ + + +V T +R+ P
Sbjct: 1372 EGNEVTFYKNVTTIKTLPYASAAASIEELDLEEEEFISLTQAAEPTV-TNNKEFCQRIEP 1430
Query: 441 LLKELEEQGFIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHIQAL 262
+K L+EQGFIGE P +HW KN++ C LD+ NPD IED+PLKH+TPQ +EAF +H+QAL
Sbjct: 1431 TIKALKEQGFIGEEPMKHWVKNKVTCKLDIINPDLTIEDRPLKHVTPQMQEAFKKHVQAL 1490
Query: 261 RTIGVIRESKSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYSLPG 82
+ VIR S+SRHRTTAIIV SGTT++P TG+EVKGKERMVFNYKRLNDNT+KDQYSLPG
Sbjct: 1491 LKLKVIRPSQSRHRTTAIIVYSGTTVDPKTGKEVKGKERMVFNYKRLNDNTNKDQYSLPG 1550
Query: 81 INTILRKVSNSKIYSKFDLKSGFHQVA 1
INTI+++V SKIYSKFDLKSGFHQVA
Sbjct: 1551 INTIIQRVGQSKIYSKFDLKSGFHQVA 1577
Score = 59.7 bits (143), Expect = 3e-06
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = -2
Query: 880 AVFQRKMDLCFKGTEQFIAVYIDDILVFSIHFQDNIQN 767
AVFQRKMD CFKGTE+FIAVYIDDILVFS + Q++ Q+
Sbjct: 1609 AVFQRKMDNCFKGTEKFIAVYIDDILVFSQNEQEHEQH 1646
>gb|AHG32726.1| ORF3, partial [Dioscorea rotundata]
Length = 579
Score = 325 bits (833), Expect = e-104
Identities = 159/267 (59%), Positives = 201/267 (75%)
Frame = -3
Query: 801 FSPFTSKTTSRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRI 622
F+ S T+R KL+ G M IGD++FRIPYT++FPL+LG Q+ILGCNFIRSM GGVRI
Sbjct: 64 FTGANSVMTARKKLKYGNMRIGDHHFRIPYTFAFPLKLGGGEQLILGCNFIRSMNGGVRI 123
Query: 621 EGNIVTFYKGVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIMKRLSP 442
EG+ VTFYK VTTI+T V ++EELE+++EEY+ +QE + ++
Sbjct: 124 EGDEVTFYKNVTTIKTQQEVPKVLALEELEMEEEEYIAMQESCSAICPVVNINFTQKFGD 183
Query: 441 LLKELEEQGFIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHIQAL 262
L++EL+ G+IGE P + W++N++ C LD+ NPD I+DKPLKH+TP +EAF +HIQAL
Sbjct: 184 LIQELKNAGYIGEEPMKFWAQNKVTCKLDIINPDLTIQDKPLKHVTPSMEEAFRKHIQAL 243
Query: 261 RTIGVIRESKSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYSLPG 82
+ VIR S S+HRTTA IV SGTT++P TG E KGKERMVFNYKRLNDNT KDQYSLPG
Sbjct: 244 LKLKVIRPSTSKHRTTAFIVHSGTTVDPKTGVETKGKERMVFNYKRLNDNTEKDQYSLPG 303
Query: 81 INTILRKVSNSKIYSKFDLKSGFHQVA 1
INTIL+++ S IYSKFDLKSGFHQVA
Sbjct: 304 INTILKRIGQSVIYSKFDLKSGFHQVA 330
>ref|YP_009229919.1| polyprotein [Blackberry Virus F]
gb|AHX37579.1| polyprotein [Blackberry Virus F]
Length = 1948
Score = 343 bits (880), Expect = e-104
Identities = 162/268 (60%), Positives = 208/268 (77%), Gaps = 1/268 (0%)
Frame = -3
Query: 801 FSPFTSKTTSRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRI 622
FS S+ + K + G+M IG+N FRIP+TYSFP+ + D I+M+LGCNFIRSM GG+RI
Sbjct: 1183 FSGINSRQLAEYKFKQGQMEIGENRFRIPFTYSFPMGMKDGIEMLLGCNFIRSMYGGLRI 1242
Query: 621 EGNIVTFYKGVTTIETTPFVTAT-CSIEELELDKEEYLQIQELIYFSVGTPQPHIMKRLS 445
EGN++TFYK VTT+ T A+ ++EEL L+ EEY I+E++Y+S+G P +R
Sbjct: 1243 EGNLLTFYKNVTTVTTVQNTEASKLAVEELGLEAEEYYSIREMVYYSLGHTSPKFQERFK 1302
Query: 444 PLLKELEEQGFIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHIQA 265
PLL+ L+EQG++GE P +HWSKNQ+ C L++ NPD I+DKP+KH+TP K+ F +H QA
Sbjct: 1303 PLLERLKEQGYVGEEPMRHWSKNQVKCKLEIINPDITIQDKPMKHVTPAMKDQFQKHTQA 1362
Query: 264 LRTIGVIRESKSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYSLP 85
L +GVIR SKSRHRT A+IV SGT+++ TG+EVKGKERMVFNYK LNDNT KDQYSLP
Sbjct: 1363 LLKLGVIRPSKSRHRTMAMIVYSGTSVDEKTGKEVKGKERMVFNYKTLNDNTFKDQYSLP 1422
Query: 84 GINTILRKVSNSKIYSKFDLKSGFHQVA 1
GINTIL+++ SKIYSKFDLKSGFHQVA
Sbjct: 1423 GINTILQRIGKSKIYSKFDLKSGFHQVA 1450
>gb|ATZ69518.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 342 bits (877), Expect = e-104
Identities = 160/267 (59%), Positives = 209/267 (78%)
Frame = -3
Query: 801 FSPFTSKTTSRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRI 622
FS S +TSR KL+ G+M IG+N+FRIPYTY+FP+++ D IQMI+GCNFIR+M+GG+RI
Sbjct: 1106 FSGINSTSTSRKKLKNGRMRIGENSFRIPYTYAFPMKIADGIQMIVGCNFIRNMQGGLRI 1165
Query: 621 EGNIVTFYKGVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIMKRLSP 442
EGN +TFYK +T+++T+ T IEE E+++ +YL++ E++ H R
Sbjct: 1166 EGNTITFYKFLTSVQTS---TIAAVIEEEEVEETDYLRLTEILAVETIQQDNHFSSRFKG 1222
Query: 441 LLKELEEQGFIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHIQAL 262
+++EL++QGFIGENP QHWSKN++ C+LD+KNPD +EDKPL ++TP KE + RH+ AL
Sbjct: 1223 VIEELKQQGFIGENPLQHWSKNRVTCYLDIKNPDLTVEDKPLDNVTPTQKEQYKRHVDAL 1282
Query: 261 RTIGVIRESKSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYSLPG 82
+GVIRES SRHRT A IV SGTTI+PVTG+E KGKERMVFNYKRLND THKDQYSLPG
Sbjct: 1283 LKLGVIRESTSRHRTNAFIVNSGTTIDPVTGEEKKGKERMVFNYKRLNDLTHKDQYSLPG 1342
Query: 81 INTILRKVSNSKIYSKFDLKSGFHQVA 1
I +IL ++ +KIYSKFDLKSGFHQ+A
Sbjct: 1343 IQSILARIGQAKIYSKFDLKSGFHQIA 1369
>gb|ATZ69522.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 342 bits (877), Expect = e-104
Identities = 160/267 (59%), Positives = 209/267 (78%)
Frame = -3
Query: 801 FSPFTSKTTSRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRI 622
FS S +TSR KL+ G+M IG+N+FRIPYTY+FP+++ D IQMI+GCNFIR+M+GG+RI
Sbjct: 1106 FSGINSTSTSRKKLKNGRMRIGENSFRIPYTYAFPMKIADGIQMIVGCNFIRNMQGGLRI 1165
Query: 621 EGNIVTFYKGVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIMKRLSP 442
EGN +TFYK +T+++T+ T IEE E+++ +YL++ E++ H R
Sbjct: 1166 EGNTITFYKFLTSVQTS---TIAAVIEEEEVEETDYLRLTEILAVETIQQDNHFSSRFKG 1222
Query: 441 LLKELEEQGFIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHIQAL 262
+++EL++QGFIGENP QHWSKN++ C+LD+KNPD +EDKPL ++TP KE + RH+ AL
Sbjct: 1223 VIEELKQQGFIGENPLQHWSKNRVTCYLDIKNPDLTVEDKPLDNVTPTQKEQYKRHVDAL 1282
Query: 261 RTIGVIRESKSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYSLPG 82
+GVIRES SRHRT A IV SGTTI+PVTG+E KGKERMVFNYKRLND THKDQYSLPG
Sbjct: 1283 LKLGVIRESTSRHRTNAFIVNSGTTIDPVTGEEKKGKERMVFNYKRLNDLTHKDQYSLPG 1342
Query: 81 INTILRKVSNSKIYSKFDLKSGFHQVA 1
I +IL ++ +KIYSKFDLKSGFHQ+A
Sbjct: 1343 IQSILARIGQAKIYSKFDLKSGFHQIA 1369
>gb|ATZ69526.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 341 bits (875), Expect = e-103
Identities = 160/267 (59%), Positives = 209/267 (78%)
Frame = -3
Query: 801 FSPFTSKTTSRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRI 622
FS S +TSR KL+ G+M IG+N+FRIPYTY+FP+++ D IQMI+GCNFIR+M+GG+RI
Sbjct: 1106 FSGINSTSTSRKKLKNGRMRIGENSFRIPYTYAFPMKIADGIQMIVGCNFIRNMQGGLRI 1165
Query: 621 EGNIVTFYKGVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIMKRLSP 442
EGN +TFYK +T+++T+ T IEE E+++ +YL++ E++ H R
Sbjct: 1166 EGNTITFYKFLTSVQTS---TIAAVIEEEEVEETDYLRLTEILAVETIQQDNHFSSRFKG 1222
Query: 441 LLKELEEQGFIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHIQAL 262
+++EL++QGFIGENP QHWSKN++ C+LD+KNPD +EDKPL ++TP KE + RH+ AL
Sbjct: 1223 VIEELKQQGFIGENPLQHWSKNRVTCYLDIKNPDLTVEDKPLDNVTPTQKEQYKRHVDAL 1282
Query: 261 RTIGVIRESKSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYSLPG 82
+GVIRES SRHRT A IV SGTTI+PVTG+E KGKERMVFNYKRLND THKDQYSLPG
Sbjct: 1283 LKLGVIRESTSRHRTNAFIVNSGTTIDPVTGEEKKGKERMVFNYKRLNDLTHKDQYSLPG 1342
Query: 81 INTILRKVSNSKIYSKFDLKSGFHQVA 1
I +IL ++ +KIYSKFDLKSGFHQ+A
Sbjct: 1343 IQSILARIGPAKIYSKFDLKSGFHQIA 1369
>gb|AHG32725.1| ORF3, partial [Dioscorea rotundata]
Length = 1257
Score = 337 bits (864), Expect = e-103
Identities = 163/262 (62%), Positives = 206/262 (78%)
Frame = -3
Query: 786 SKTTSRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRIEGNIV 607
S+ ++ KL+ G M IGDN FRIPYT++FPLRLG Q+I+GCNFIR+M GGVRIEG+ V
Sbjct: 616 SEMVAKKKLKNGIMRIGDNQFRIPYTFAFPLRLGGGEQLIIGCNFIRAMNGGVRIEGDTV 675
Query: 606 TFYKGVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFSVGTPQPHIMKRLSPLLKEL 427
TFYK VTT++T V ++EELE+D++EY+++Q+ + S P + +LS +L+EL
Sbjct: 676 TFYKNVTTVKTQQQVPKLLALEELEMDEDEYIELQQSV--SAIEPSNYFSNKLSQVLQEL 733
Query: 426 EEQGFIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHIQALRTIGV 247
++ G+IG++P + WSKNQ+ C L++ NPD I+DKPLKH+TP E F +HI AL + V
Sbjct: 734 KQAGYIGDDPLKFWSKNQVTCELNIINPDLTIQDKPLKHVTPAMSETFRKHIDALLKLKV 793
Query: 246 IRESKSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYSLPGINTIL 67
IRESKSRHRTTA IV SGTT++P TG+E KGKERMVFNYKRLNDNT KDQYSLPGINTIL
Sbjct: 794 IRESKSRHRTTAFIVYSGTTVDPTTGKEQKGKERMVFNYKRLNDNTEKDQYSLPGINTIL 853
Query: 66 RKVSNSKIYSKFDLKSGFHQVA 1
+KV SKIYSKFDLKSGFHQVA
Sbjct: 854 KKVGQSKIYSKFDLKSGFHQVA 875
>gb|PKU61844.1| RNA-directed DNA polymerase [Dendrobium catenatum]
Length = 531
Score = 320 bits (821), Expect = e-103
Identities = 156/270 (57%), Positives = 201/270 (74%), Gaps = 3/270 (1%)
Frame = -3
Query: 801 FSPFTSKTTSRTKLRAGKMTIGDNNFRIPYTYSFPLRLGDKIQMILGCNFIRSMKGGVRI 622
F S+TT+ KL+ G+M IGD FRIPYTY+FP+++G+ IQM++GCNFIR+M GGVRI
Sbjct: 113 FKGVNSETTADKKLKGGRMVIGDQQFRIPYTYAFPMKIGEDIQMLIGCNFIRAMHGGVRI 172
Query: 621 EGNIVTFYKGVTTIETTPFVTATCSIEELELDKEEYLQIQELIYFS---VGTPQPHIMKR 451
EG+ VTFYK VTTI +T++C ++ EEY QE+ S + P P ++
Sbjct: 173 EGDEVTFYKNVTTIHAN--ITSSC------IEDEEYGMAQEIERMSAHEIQIPAP-FKRQ 223
Query: 450 LSPLLKELEEQGFIGENPQQHWSKNQILCHLDLKNPDFVIEDKPLKHLTPQNKEAFTRHI 271
L+K+L+ G+IG+NP +HW N++ C LD+KNPD IED+PLK +TPQ +E+F RHI
Sbjct: 224 FEGLIKQLQAAGYIGDNPIKHWLANKVTCQLDIKNPDITIEDRPLKRVTPQMQESFQRHI 283
Query: 270 QALRTIGVIRESKSRHRTTAIIVKSGTTINPVTGQEVKGKERMVFNYKRLNDNTHKDQYS 91
+AL + VIR +S+HRTTA + SGTTINPVTG+E +GKERMVFNYKRLNDNTHKDQYS
Sbjct: 284 KALLDLKVIRPCQSKHRTTAFLASSGTTINPVTGKEERGKERMVFNYKRLNDNTHKDQYS 343
Query: 90 LPGINTILRKVSNSKIYSKFDLKSGFHQVA 1
LPGINTI+ K+ N +YSKFDLKSGFHQVA
Sbjct: 344 LPGINTIINKIGNCSVYSKFDLKSGFHQVA 373
Score = 58.5 bits (140), Expect = 6e-06
Identities = 27/38 (71%), Positives = 33/38 (86%)
Frame = -2
Query: 880 AVFQRKMDLCFKGTEQFIAVYIDDILVFSIHFQDNIQN 767
AVFQR+MD CFKGTE FIAVYIDDILVFS + Q++ ++
Sbjct: 405 AVFQRRMDYCFKGTENFIAVYIDDILVFSKNNQEHAEH 442