BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00050461
         (822 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]                   235   6e-67
gb|AER00538.1| ORF III [Citrus yellow mosaic virus]                   217   2e-60
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]               216   3e-60
ref|NP_569153.1| unknown [Citrus yellow mosaic virus] >gi|164169...   216   3e-60
gb|ACH86211.1| unknown [Citrus yellow mosaic virus]                   216   3e-60
gb|ANG56359.1| protease, partial [Fig badnavirus 1]                   203   5e-60
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]               215   7e-60
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]               215   7e-60
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]               215   7e-60
gb|ANG56364.1| protease, partial [Fig badnavirus 1]                   202   9e-60
gb|ANG56362.1| protease, partial [Fig badnavirus 1]                   202   9e-60
gb|ANG56361.1| protease, partial [Fig badnavirus 1]                   202   9e-60
gb|ANG56366.1| protease, partial [Fig badnavirus 1]                   202   1e-59
gb|ANG56365.1| protease, partial [Fig badnavirus 1]                   202   1e-59
gb|ANG56363.1| protease, partial [Fig badnavirus 1]                   202   2e-59
gb|ANG56360.1| protease, partial [Fig badnavirus 1]                   202   2e-59
gb|ANG56358.1| protease, partial [Fig badnavirus 1]                   201   4e-59
gb|AER00544.1| ORF III [Citrus yellow mosaic virus]                   211   3e-58
gb|ASM61315.1| pepsin-like aspartate protease, partial [Cacao sw...   195   4e-57
gb|AND74069.1| coat protein, partial [Cacao swollen shoot virus]      191   2e-56

>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
          Length = 1846

 Score =  235 bits (600), Expect = 6e-67
 Identities = 127/277 (45%), Positives = 179/277 (64%), Gaps = 7/277 (2%)
 Frame = -2

Query: 821  PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISY----YKTQLQSYQLTQEPETDLQ* 654
            P P       KLI EQ  +I W E E+ERL+K++SY    Y+  L++  + ++ + D + 
Sbjct: 952  PPPPTPMNPRKLIMEQQNHIQWCEVEIERLEKEVSYWKKLYENALRATGVIEDLQKDYKE 1011

Query: 653  LALHDKGKTKT---GLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTVE 483
            L   D+ K K    G+  ++E     +LQEE +++++       K  K+V+N+LYN  + 
Sbjct: 1012 LLSEDEEKRKRRAKGVMIIEEGEQANFLQEEKVNKVAVQEEQRPK--KMVRNMLYNFIIS 1069

Query: 482  LEIPGIPRFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGR 303
            ++IPGI +F VKAILDTGATTCCID +++PKE LE NTY V+FSG+NS   +N KLKGGR
Sbjct: 1070 IDIPGIDKFSVKAILDTGATTCCIDQESIPKEALEENTYLVRFSGVNSTMTANKKLKGGR 1129

Query: 302  MYIGENIFRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHLXXXXXXX 123
            M+IGEN+FRIPYTYSFP+++ DG+QMI+GCNFI+++ GGVRIEGN+VTFYK+L       
Sbjct: 1130 MFIGENMFRIPYTYSFPIKMEDGVQMIVGCNFIRAMYGGVRIEGNVVTFYKNL--TVINT 1187

Query: 122  XXXXXXTAXXXXXXXXXXXLQIQKSVYYNHGMSQQSF 12
                                QIQ++VY N G S++SF
Sbjct: 1188 SQSTEIARMLQEDVDDEELWQIQEAVYINIGKSRESF 1224


>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
          Length = 1982

 Score =  217 bits (552), Expect = 2e-60
 Identities = 116/234 (49%), Positives = 155/234 (66%), Gaps = 8/234 (3%)
 Frame = -2

Query: 821  PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LALH 642
            P P A F    L+Q+Q  YI+W   E+ RL++++++YK      QL QE E  LQ   L 
Sbjct: 1083 PMPQAPFNQKGLLQQQQEYIAWCNNEIARLKEEVAFYK------QLAQERELQLQ---LE 1133

Query: 641  DKGKTKTGLEQ--------VQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTV 486
               K   G++         V +E +  +  EE    I+ G + V+K  + VKN+LYNM V
Sbjct: 1134 QSRKELAGVDSRRRKDKGVVIDEGSCYFNPEETTRIIAHGDTQVTKT-RPVKNMLYNMDV 1192

Query: 485  ELEIPGIPRFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGG 306
             +EIPGIP F VKAILDTGATTCCID +++PK+ LE N++ V FSGINS+Q    KLK G
Sbjct: 1193 RMEIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKLKAG 1252

Query: 305  RMYIGENIFRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
            +M+I E+ FRIPY YSF MQ+GDGIQ+I+GCNFI+S+ GGVR+EGN +TFYK +
Sbjct: 1253 KMFINEHYFRIPYCYSFVMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQI 1306


>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1967

 Score =  216 bits (551), Expect = 3e-60
 Identities = 112/226 (49%), Positives = 154/226 (68%)
 Frame = -2

Query: 821  PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LALH 642
            P P A F    L+Q+Q  YI+W   E+ RL++++++YK   Q  +L  + E   + LA  
Sbjct: 1068 PIPQAPFNQKGLLQQQQEYIAWCNNEIARLKEEVAFYKQLAQERELQLQLEQSRKELAGA 1127

Query: 641  DKGKTKTGLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTVELEIPGIP 462
            D  + K     V +E +  +  EE    ++ G + V+K  + VKN+LYNM V +EIPGIP
Sbjct: 1128 DSRRRKDK-GVVIDEGSCYFNPEETTRIVAHGDTQVTKT-RPVKNMLYNMDVRMEIPGIP 1185

Query: 461  RFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGRMYIGENI 282
             F VKAILDTGATTCCID +++PK+ LE N++ V FSGINS+Q    K+K G+M+I E+ 
Sbjct: 1186 AFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKAGKMFINEHY 1245

Query: 281  FRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
            FRIPY YSF MQ+GDGIQ+I+GCNFI+S+ GGVR+EGN VTFYK +
Sbjct: 1246 FRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTVTFYKQI 1291


>ref|NP_569153.1| unknown [Citrus yellow mosaic virus]
 gb|AAL18495.1|AF347695_3 unknown [Citrus yellow mosaic virus]
          Length = 1983

 Score =  216 bits (551), Expect = 3e-60
 Identities = 114/227 (50%), Positives = 156/227 (68%), Gaps = 1/227 (0%)
 Frame = -2

Query: 821  PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LALH 642
            P P A F    L+Q+Q  YI+W   E+ RL++++++YK   Q  +L  + E   + LA  
Sbjct: 1084 PMPQAPFNQKGLLQQQQEYIAWCNNEIARLKEEVAFYKQLAQERELQLQLEQSRKELAGV 1143

Query: 641  DKGKTKT-GLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTVELEIPGI 465
            D  + K  G+  V +E +  +  EE    I+ G + V+K  + VKN+LYNM V +EIPGI
Sbjct: 1144 DSRRRKDKGI--VIDEGSCYFNPEETTRIIAHGDTQVTKT-RPVKNMLYNMDVRMEIPGI 1200

Query: 464  PRFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGRMYIGEN 285
            P F VKAILDTGATTCCID +++PK+ LE N++ V FSGINS+Q    KLK G+M+I E+
Sbjct: 1201 PAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKLKTGKMFINEH 1260

Query: 284  IFRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
             FRIPY YSF MQ+GDGIQ+I+GCNFI+S+ GGVR+EGN +TFYK +
Sbjct: 1261 YFRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQI 1307


>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
          Length = 1490

 Score =  216 bits (550), Expect = 3e-60
 Identities = 112/226 (49%), Positives = 154/226 (68%)
 Frame = -2

Query: 821  PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LALH 642
            P P A F    L+Q+Q  YI+W   E+ RL++++++YK   Q  +L  + E   + LA  
Sbjct: 592  PMPQAPFNQKGLLQQQQEYIAWCNNEIARLKEEVAFYKQLAQERELQLQLEQSRKELAGT 651

Query: 641  DKGKTKTGLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTVELEIPGIP 462
            D  + K     V +E +  +  EE    I+ G + V+K  + VKN+LYNM V +EIPGIP
Sbjct: 652  DARRRKDK-GVVIDEGSCYFNPEETTRIIAHGDTQVTKT-RPVKNMLYNMDVRMEIPGIP 709

Query: 461  RFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGRMYIGENI 282
             F VKAILDTGATTCCID +++PK+ LE N++ V FSGINS+Q    K+K G+M+I E+ 
Sbjct: 710  AFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKAGKMFINEHY 769

Query: 281  FRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
            FRIPY YSF MQ+GDGIQ+I+GCNFI+S+ GGVR+EGN +TFYK +
Sbjct: 770  FRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQI 815


>gb|ANG56359.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  203 bits (517), Expect = 5e-60
 Identities = 107/226 (47%), Positives = 144/226 (63%)
 Frame = -2

Query: 821 PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LALH 642
           PAP       ++IQEQ  YI W E E+ERL K++ +YK   ++  + +    D + L   
Sbjct: 25  PAPSTPINPRRIIQEQHNYIGWCEVEIERLNKEVKHYKGLYEALLMEKSLRKDYEELREG 84

Query: 641 DKGKTKTGLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTVELEIPGIP 462
           DK + K  L Q  EE   +   E+ +      ++   +  K VKN+LYN  +E EIP + 
Sbjct: 85  DKERRKGILIQEPEEVNYLGEDEKIL------AAGTEEKKKFVKNMLYNFDIEFEIPDVS 138

Query: 461 RFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGRMYIGENI 282
           RF V+AILDTGA+TCCI+   +PKE LE + Y VQ +G+NS Q +  KLK GRM IG N 
Sbjct: 139 RFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSVQKTKKKLKYGRMMIGMNT 198

Query: 281 FRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
           FRIP+TYS P+ +GD IQMI+GCNFI+++ GGVRIEGN VTFYK+L
Sbjct: 199 FRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNL 244


>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1968

 Score =  215 bits (548), Expect = 7e-60
 Identities = 111/226 (49%), Positives = 154/226 (68%)
 Frame = -2

Query: 821  PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LALH 642
            P P A F    L+Q+Q  YI+W   E+ RL++++++YK   Q  +L  + E   + LA  
Sbjct: 1069 PIPQAPFNQKGLLQQQQEYIAWCNNEIARLKEEVAFYKQLAQERELQLQLEQSRKELAGT 1128

Query: 641  DKGKTKTGLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTVELEIPGIP 462
            D  + K     V +E +  +  EE    ++ G + V+K  + V+N+LYNM V +EIPGIP
Sbjct: 1129 DARRRKDK-GVVIDEGSCYFNPEETTRIVAHGDTQVTKT-RPVRNMLYNMDVRMEIPGIP 1186

Query: 461  RFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGRMYIGENI 282
             F VKAILDTGATTCCID +++PK+ LE N++ V FSGINS+Q    KLK G+M+I E+ 
Sbjct: 1187 AFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKLKAGKMFINEHY 1246

Query: 281  FRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
            FRIPY YSF MQ+GDGIQ+I+GCNFI+S+ GGVR+EGN +TFYK +
Sbjct: 1247 FRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQI 1292


>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1976

 Score =  215 bits (548), Expect = 7e-60
 Identities = 111/226 (49%), Positives = 154/226 (68%)
 Frame = -2

Query: 821  PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LALH 642
            P P A F    L+Q+Q  YI+W   E+ RL++++++YK   Q  +L  + E   + LA  
Sbjct: 1076 PIPQAPFNQKGLLQQQQEYIAWCNNEIARLKEEVAFYKQLAQERELQLQLEQSRKELAGA 1135

Query: 641  DKGKTKTGLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTVELEIPGIP 462
            D  + K     V +E +  +  EE    ++ G + V+K  + VKN+LYNM V +EIPGIP
Sbjct: 1136 DSRRRKDK-GVVIDEGSCYFNPEETTRIVAHGDTQVTKT-RPVKNMLYNMDVRIEIPGIP 1193

Query: 461  RFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGRMYIGENI 282
             F VKAILDTGATTCCID +++PK+ LE N++ V FSGINS+Q    K+K G+M+I E+ 
Sbjct: 1194 AFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKPGKMFISEHY 1253

Query: 281  FRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
            FRIPY YSF MQ+GDGIQ+I+GCNFI+S+ GGVR+EGN +TFYK +
Sbjct: 1254 FRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQI 1299


>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1979

 Score =  215 bits (548), Expect = 7e-60
 Identities = 111/226 (49%), Positives = 154/226 (68%)
 Frame = -2

Query: 821  PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LALH 642
            P P A F    L+Q+Q  YI+W   E+ RL++++++YK   Q  +L  + E   + LA  
Sbjct: 1078 PIPQAPFNQKGLLQQQQEYIAWCNNEIARLKEEVAFYKQLAQERELQLQLEQSRKELAGA 1137

Query: 641  DKGKTKTGLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTVELEIPGIP 462
            D  + K     V +E +  +  EE    ++ G + V+K  + VKN+LYNM V +EIPGIP
Sbjct: 1138 DSRRRKDK-GVVIDEGSCYFNPEETTRIVAHGDTQVTKT-RPVKNMLYNMDVRMEIPGIP 1195

Query: 461  RFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGRMYIGENI 282
             F VKAILDTGATTCCID +++PK+ LE N++ V FSGINS+Q    K+K G+M+I E+ 
Sbjct: 1196 AFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKPGKMFISEHY 1255

Query: 281  FRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
            FRIPY YSF MQ+GDGIQ+I+GCNFI+S+ GGVR+EGN +TFYK +
Sbjct: 1256 FRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQI 1301


>gb|ANG56364.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  202 bits (515), Expect = 9e-60
 Identities = 106/226 (46%), Positives = 144/226 (63%)
 Frame = -2

Query: 821 PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LALH 642
           PAP       ++IQEQ  YI W E E+ERL K++ +YK   ++  + +    D + L   
Sbjct: 25  PAPSTPINPRRIIQEQHNYIGWCEVEIERLNKEVKHYKGLYEALLMEKSLRKDYEELKEG 84

Query: 641 DKGKTKTGLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTVELEIPGIP 462
           DK + K  + Q  EE   +   E+ +      ++   +  K VKN+LYN  +E EIP + 
Sbjct: 85  DKERRKGIMIQEPEEVNYLGEDEKIL------AAGTEEKKKFVKNMLYNFDIEFEIPDVS 138

Query: 461 RFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGRMYIGENI 282
           RF V+AILDTGA+TCCI+   +PKE LE + Y VQ +G+NS Q +  KLK GRM IG N 
Sbjct: 139 RFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSVQKTKKKLKYGRMMIGMNT 198

Query: 281 FRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
           FRIP+TYS P+ +GD IQMI+GCNFI+++ GGVRIEGN VTFYK+L
Sbjct: 199 FRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNL 244


>gb|ANG56362.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  202 bits (515), Expect = 9e-60
 Identities = 106/226 (46%), Positives = 144/226 (63%)
 Frame = -2

Query: 821 PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LALH 642
           PAP       ++IQEQ  YI W E E+ERL K++ +YK   ++  + +    D + L   
Sbjct: 25  PAPSTPINPRRIIQEQHNYIGWCEVEIERLNKEVKHYKGLYEALLMEKSLRKDYEELKEG 84

Query: 641 DKGKTKTGLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTVELEIPGIP 462
           DK + K  + Q  EE   +   E+ +      ++   +  K VKN+LYN  +E EIP + 
Sbjct: 85  DKERRKGIMIQEPEEVNYLGEDEKIL------AAGTEEKKKFVKNMLYNFDIEFEIPDVS 138

Query: 461 RFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGRMYIGENI 282
           RF V+AILDTGA+TCCI+   +PKE LE + Y VQ +G+NS Q +  KLK GRM IG N 
Sbjct: 139 RFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSVQKTKKKLKYGRMMIGMNT 198

Query: 281 FRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
           FRIP+TYS P+ +GD IQMI+GCNFI+++ GGVRIEGN VTFYK+L
Sbjct: 199 FRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNL 244


>gb|ANG56361.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  202 bits (515), Expect = 9e-60
 Identities = 107/226 (47%), Positives = 144/226 (63%)
 Frame = -2

Query: 821 PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LALH 642
           PAP       ++IQEQ  YI W E E+ERL K++ +YK   ++  + +    D + L   
Sbjct: 25  PAPSTPINPRRIIQEQHNYIGWCEVEIERLNKEVKHYKGLYEALLMEKSLRKDYEELIEG 84

Query: 641 DKGKTKTGLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTVELEIPGIP 462
           DK + K  L Q  EE   +   E+ +      ++   +  K VKN+LYN  +E EIP + 
Sbjct: 85  DKERRKGILIQEPEEVNYLGEDEKIL------AAGTEEKKKFVKNMLYNFDIESEIPDVS 138

Query: 461 RFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGRMYIGENI 282
           RF V+AILDTGA+TCCI+   +PKE LE + Y VQ +G+NS Q +  KLK GRM IG N 
Sbjct: 139 RFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSVQKTKKKLKYGRMMIGMNT 198

Query: 281 FRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
           FRIP+TYS P+ +GD IQMI+GCNFI+++ GGVRIEGN VTFYK+L
Sbjct: 199 FRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNL 244


>gb|ANG56366.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  202 bits (514), Expect = 1e-59
 Identities = 106/226 (46%), Positives = 144/226 (63%)
 Frame = -2

Query: 821 PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LALH 642
           PAP       ++IQEQ  YI W E E+ERL K++ +YK   ++  + +    D + L   
Sbjct: 25  PAPSTPINPRRIIQEQHNYIGWCEVEIERLNKEVKHYKGLYEALLMEKSLRKDYEELKDG 84

Query: 641 DKGKTKTGLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTVELEIPGIP 462
           DK + K  + Q  EE   +   E+ +      ++   +  K VKN+LYN  +E EIP + 
Sbjct: 85  DKERRKGIMIQEPEEVNYLGEDEKIL------AAGTEEKKKFVKNMLYNFDIEFEIPDVS 138

Query: 461 RFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGRMYIGENI 282
           RF V+AILDTGA+TCCI+   +PKE LE + Y VQ +G+NS Q +  KLK GRM IG N 
Sbjct: 139 RFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSVQKTKKKLKYGRMMIGMNT 198

Query: 281 FRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
           FRIP+TYS P+ +GD IQMI+GCNFI+++ GGVRIEGN VTFYK+L
Sbjct: 199 FRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNL 244


>gb|ANG56365.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  202 bits (514), Expect = 1e-59
 Identities = 106/226 (46%), Positives = 144/226 (63%)
 Frame = -2

Query: 821 PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LALH 642
           PAP       ++IQEQ  YI W E E+ERL K++ +YK   ++  + +    D + L   
Sbjct: 25  PAPSTPINPRRIIQEQHNYIGWCEVEIERLNKEVKHYKGLYEALLMEKSLRKDYEELKEG 84

Query: 641 DKGKTKTGLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTVELEIPGIP 462
           DK + K  + Q  EE   +   E+ +      ++   +  K VKN+LYN  +E EIP + 
Sbjct: 85  DKERRKGIMIQEPEEVNYLGEDEKIL------AAGTEEKKKFVKNMLYNSDIEFEIPDVS 138

Query: 461 RFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGRMYIGENI 282
           RF V+AILDTGA+TCCI+   +PKE LE + Y VQ +G+NS Q +  KLK GRM IG N 
Sbjct: 139 RFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSVQKTKKKLKYGRMMIGMNT 198

Query: 281 FRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
           FRIP+TYS P+ +GD IQMI+GCNFI+++ GGVRIEGN VTFYK+L
Sbjct: 199 FRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNL 244


>gb|ANG56363.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  202 bits (513), Expect = 2e-59
 Identities = 106/226 (46%), Positives = 143/226 (63%)
 Frame = -2

Query: 821 PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LALH 642
           PAP       ++IQEQ  YI W E E+ERL K++ +YK   ++  +      D + L   
Sbjct: 25  PAPSTPINPRRIIQEQHNYIGWCEVEIERLNKEVKHYKGLYEALLMETSLRKDYEELIEG 84

Query: 641 DKGKTKTGLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTVELEIPGIP 462
           DK + K  + Q  EE   +   E+ +      ++   +  K VKN+LYN  +E EIP + 
Sbjct: 85  DKERRKGIMIQEPEEVNYLGEDEKIL------AAGTEEKKKFVKNMLYNFDIEFEIPDVS 138

Query: 461 RFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGRMYIGENI 282
           RF V+AILDTGA+TCCI+   +PKE LE + Y VQ +G+NS Q +  KLK GRM IG N 
Sbjct: 139 RFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSVQKTKKKLKYGRMMIGMNT 198

Query: 281 FRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
           FRIP+TYS P+ +GD IQMI+GCNFI+++ GGVRIEGN VTFYK+L
Sbjct: 199 FRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNL 244


>gb|ANG56360.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  202 bits (513), Expect = 2e-59
 Identities = 106/226 (46%), Positives = 144/226 (63%)
 Frame = -2

Query: 821 PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LALH 642
           PAP       ++IQEQ  YI W E E+ERL K++ +YK   ++  + +    D + L   
Sbjct: 25  PAPSTPINPRRIIQEQHNYIGWCEVEIERLNKEVMHYKGLYEALLMEKSLRKDYEELIDG 84

Query: 641 DKGKTKTGLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTVELEIPGIP 462
           DK + K  + Q  EE   +   E+ +      ++   +  K VKN+LYN  +E EIP + 
Sbjct: 85  DKERRKGIMIQEPEEVNYLGEDEKIL------AAGTEEKKKFVKNMLYNFDIEFEIPDVS 138

Query: 461 RFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGRMYIGENI 282
           RF V+AILDTGA+TCCI+   +PKE LE + Y VQ +G+NS Q +  KLK GRM IG N 
Sbjct: 139 RFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSVQKTKKKLKYGRMMIGMNT 198

Query: 281 FRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
           FRIP+TYS P+ +GD IQMI+GCNFI+++ GGVRIEGN VTFYK+L
Sbjct: 199 FRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNL 244


>gb|ANG56358.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  201 bits (511), Expect = 4e-59
 Identities = 106/226 (46%), Positives = 144/226 (63%)
 Frame = -2

Query: 821 PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LALH 642
           PAP       ++IQEQ  YI W E E+ERL K++ +YK   ++  + +    D + L   
Sbjct: 25  PAPSTPINPRRIIQEQHNYIGWCEVEIERLNKEVMHYKGLYEALLMEKSLRKDYEELIDG 84

Query: 641 DKGKTKTGLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTVELEIPGIP 462
           DK + K  + Q  EE   +   E+ +      ++   +  K VKN+LYN  +E EIP + 
Sbjct: 85  DKERRKGIMIQEPEEVNYLGEDEKIL------AAGTEEKKKFVKNMLYNFDIESEIPDVS 138

Query: 461 RFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGRMYIGENI 282
           RF V+AILDTGA+TCCI+   +PKE LE + Y VQ +G+NS Q +  KLK GRM IG N 
Sbjct: 139 RFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSVQKTKKKLKYGRMMIGMNT 198

Query: 281 FRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
           FRIP+TYS P+ +GD IQMI+GCNFI+++ GGVRIEGN VTFYK+L
Sbjct: 199 FRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGNEVTFYKNL 244


>gb|AER00544.1| ORF III [Citrus yellow mosaic virus]
          Length = 1976

 Score =  211 bits (536), Expect = 3e-58
 Identities = 108/226 (47%), Positives = 152/226 (67%)
 Frame = -2

Query: 821  PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LALH 642
            P P A F    L+Q+Q  YI+W   E+ RL++++++YK   Q  +L  + E   + LA  
Sbjct: 1076 PIPQAPFNQKGLLQQQQEYIAWCNNEIARLKEEVAFYKQLAQERELQLQLEQSRKELAGA 1135

Query: 641  DKGKTKTGLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVKNLLYNMTVELEIPGIP 462
            D  + K     V +E +  +  EE    ++ G + V+K  + V+N+LYNM V +EIPGIP
Sbjct: 1136 DSRRRKDK-GVVIDEGSCYFNPEETTRIVAHGDTQVTKT-RPVRNMLYNMDVRMEIPGIP 1193

Query: 461  RFEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGRMYIGENI 282
             F VK I DTGATTCCID +++PK+ LE N++ V FSGINS+Q    K+K G+M+I E+ 
Sbjct: 1194 AFTVKTIHDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQVKQKIKSGKMFINEHY 1253

Query: 281  FRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
            FRIPY YSF MQ+GDGIQ+I+GCNFI+S+ GGVR+EGN +TFYK +
Sbjct: 1254 FRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNTITFYKQI 1299


>gb|ASM61315.1| pepsin-like aspartate protease, partial [Cacao swollen shoot virus]
 gb|ASM61316.1| pepsin-like aspartate protease, partial [Cacao swollen shoot virus]
          Length = 339

 Score =  195 bits (496), Expect = 4e-57
 Identities = 108/233 (46%), Positives = 154/233 (66%), Gaps = 7/233 (3%)
 Frame = -2

Query: 821 PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*LA-- 648
           P P   F +  L+Q+Q+ YI WLEGE +RL + + +YK +    +L +E E D Q L   
Sbjct: 4   PKPPTPFNTHTLLQQQAAYIQWLEGENQRLTEAVEFYKKEAADLRLEKELERDRQSLEPK 63

Query: 647 LHDKGKTKTGLEQVQEEFTNIWLQEENIHQI----SQGSSPVSKNAKIVKNLLYNMTVEL 480
           + ++GK K  +++  ++    +L+E+ I +I     +G   V K A+   N+LYN+ V L
Sbjct: 64  MKERGK-KVQIQEPSDDEHIAYLEEDTISRIIGHTMEGQQEVKKPAQR-GNMLYNLDVVL 121

Query: 479 EIPGIPR-FEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGR 303
            IP + R  +VKAILDTGATTCCID  ++PK  +E NT+ VQF GINS Q  + KLK GR
Sbjct: 122 IIPEVGRPIKVKAILDTGATTCCIDINSVPKAAIEQNTFLVQFRGINSTQSVDKKLKYGR 181

Query: 302 MYIGENIFRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
           M I  + FRIPY Y+FP+ LGDGI+MI+GCNFI+ + GG+RIEG+ +TFYK++
Sbjct: 182 MTISNHQFRIPYCYAFPLSLGDGIEMILGCNFIRGMYGGLRIEGHTITFYKNV 234


>gb|AND74069.1| coat protein, partial [Cacao swollen shoot virus]
          Length = 262

 Score =  191 bits (485), Expect = 2e-56
 Identities = 105/231 (45%), Positives = 153/231 (66%), Gaps = 5/231 (2%)
 Frame = -2

Query: 821 PAPLAQFFS*KLIQEQSYYISWLEGEVERLQKKISYYKTQLQSYQLTQEPETDLQ*L--A 648
           P P   F +  L+Q+Q+ YI WLE E +RL + + +YK + +  +L ++ E D + L   
Sbjct: 17  PKPPVPFNTHTLLQQQAAYIQWLEKENQRLTEAVEFYKKEAEELRLERDLEQDRRSLEPT 76

Query: 647 LHDKGKTKTGLEQVQEEFTNIWLQEENIHQISQGSSPVSKNAKIVK--NLLYNMTVELEI 474
           L DKGK    L+  +++ T  +L+E+ I ++   +    +  K VK  N+LYN+ V L I
Sbjct: 77  LLDKGKKVQILDPDEDQHT-AYLEEDTISRVIGHTVEQQEVRKPVKKGNMLYNLDVVLHI 135

Query: 473 PGIPR-FEVKAILDTGATTCCID*QTMPKEGLETNTYTVQFSGINSQQLSNLKLKGGRMY 297
           P + R  +VKAILDTGATTCCI+  ++P+  +E NT+ VQF GINS Q  + KLK GRM 
Sbjct: 136 PEVGRPIKVKAILDTGATTCCININSVPQTAIEQNTFLVQFRGINSTQSVDKKLKYGRMT 195

Query: 296 IGENIFRIPYTYSFPMQLGDGIQMIIGCNFIKSIQGGVRIEGNLVTFYKHL 144
           I  + FRIPY Y+FP+ LGDGI+MI+GCNFI+ + GG+RIEG+ +TFYK++
Sbjct: 196 ISNHQFRIPYCYAFPLSLGDGIEMILGCNFIRGMYGGLRIEGHTITFYKNV 246