BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00049310
         (975 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KJB35278.1| hypothetical protein B456_006G108000, partial [Go...    84   7e-17
gb|OAY83767.1| General transcription factor IIH subunit 4 [Anana...    91   2e-16
ref|XP_020113269.1| RNA polymerase II transcription factor B sub...    89   3e-16
gb|OAY83764.1| General transcription factor IIH subunit 4 [Anana...    89   3e-16
ref|XP_020113268.1| RNA polymerase II transcription factor B sub...    89   4e-16
ref|XP_020113267.1| RNA polymerase II transcription factor B sub...    89   4e-16
gb|PNT62154.1| hypothetical protein BRADI_5g26360v3 [Brachypodiu...    88   4e-16
ref|XP_014750931.1| PREDICTED: general transcription factor IIH ...    88   1e-15
ref|XP_020581220.1| RNA polymerase II transcription factor B sub...    88   1e-15
ref|XP_020581219.1| RNA polymerase II transcription factor B sub...    88   1e-15
ref|XP_020584028.1| LOW QUALITY PROTEIN: RNA polymerase II trans...    88   1e-15
ref|XP_013460803.1| transcription factor [Medicago truncatula] >...    87   1e-15
ref|XP_003580836.1| PREDICTED: general transcription factor IIH ...    88   1e-15
ref|XP_013460799.1| transcription factor [Medicago truncatula] >...    87   1e-15
gb|PNT62153.1| hypothetical protein BRADI_5g26360v3 [Brachypodiu...    88   2e-15
gb|PIA44016.1| hypothetical protein AQUCO_01800227v1 [Aquilegia ...    87   2e-15
gb|PIA41892.1| hypothetical protein AQUCO_02100016v1 [Aquilegia ...    87   2e-15
ref|XP_013460805.1| transcription factor [Medicago truncatula] >...    86   2e-15
ref|XP_012091582.1| RNA polymerase II transcription factor B sub...    87   2e-15
gb|PIA44014.1| hypothetical protein AQUCO_01800227v1 [Aquilegia ...    87   2e-15

>gb|KJB35278.1| hypothetical protein B456_006G108000, partial [Gossypium raimondii]
          Length = 72

 Score = 84.0 bits (206), Expect = 7e-17
 Identities = 44/69 (63%), Positives = 52/69 (75%)
 Frame = -3

Query: 436 IEYQLPNSIVGAITKESLYDAFENGITAVQIVSFLKQNAHPRVAQKIQVSF*TGTTQVPY 257
           +EYQLPN IVGAI KESLY+AFENGITA QIV+FL+QNAHPRVA+KI          VP 
Sbjct: 1   VEYQLPNLIVGAIIKESLYNAFENGITAEQIVTFLQQNAHPRVAEKI--------PSVPE 52

Query: 256 NPTPEIMFL 230
           N T ++ +L
Sbjct: 53  NVTDQVEYL 61


>gb|OAY83767.1| General transcription factor IIH subunit 4 [Ananas comosus]
          Length = 434

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 56/115 (48%), Positives = 71/115 (61%)
 Frame = -3

Query: 529 FMLYEICVKLRSFVYLLLHSTYIY*LLAHFRIEYQLPNSIVGAITKESLYDAFENGITAV 350
           F++ E   ++ ++    LHS     L    RIEYQLPN IVGAITKESLY+AFENGITA 
Sbjct: 318 FVVVETNFRMYAYSTSRLHSEI---LRLFSRIEYQLPNLIVGAITKESLYNAFENGITAE 374

Query: 349 QIVSFLKQNAHPRVAQKIQVSF*TGTTQVPYNPTPEIMFLFPNDYRKSYSSQEVL 185
           QIVSFL+QNAHPRVA+KI       T Q  + P   +  +  N   K  +S +V+
Sbjct: 375 QIVSFLQQNAHPRVAEKIPTVPENVTDQYQFFPLFLLFIMAGNCENKYATSDKVM 429


>ref|XP_020113269.1| RNA polymerase II transcription factor B subunit 2 isoform X3
           [Ananas comosus]
          Length = 379

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 54/97 (55%), Positives = 64/97 (65%)
 Frame = -3

Query: 529 FMLYEICVKLRSFVYLLLHSTYIY*LLAHFRIEYQLPNSIVGAITKESLYDAFENGITAV 350
           F++ E   ++ ++    LHS     L    RIEYQLPN IVGAITKESLY+AFENGITA 
Sbjct: 225 FVVVETNFRMYAYSTSRLHSEI---LRLFSRIEYQLPNLIVGAITKESLYNAFENGITAE 281

Query: 349 QIVSFLKQNAHPRVAQKIQVSF*TGTTQVPYNPTPEI 239
           QIVSFL+QNAHPRVA+KI          VP N T +I
Sbjct: 282 QIVSFLQQNAHPRVAEKIPT--------VPENVTDQI 310


>gb|OAY83764.1| General transcription factor IIH subunit 4 [Ananas comosus]
          Length = 418

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 54/97 (55%), Positives = 64/97 (65%)
 Frame = -3

Query: 529 FMLYEICVKLRSFVYLLLHSTYIY*LLAHFRIEYQLPNSIVGAITKESLYDAFENGITAV 350
           F++ E   ++ ++    LHS     L    RIEYQLPN IVGAITKESLY+AFENGITA 
Sbjct: 264 FVVVETNFRMYAYSTSRLHSEI---LRLFSRIEYQLPNLIVGAITKESLYNAFENGITAE 320

Query: 349 QIVSFLKQNAHPRVAQKIQVSF*TGTTQVPYNPTPEI 239
           QIVSFL+QNAHPRVA+KI          VP N T +I
Sbjct: 321 QIVSFLQQNAHPRVAEKIPT--------VPENVTDQI 349


>ref|XP_020113268.1| RNA polymerase II transcription factor B subunit 2 isoform X2
           [Ananas comosus]
          Length = 429

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 54/97 (55%), Positives = 64/97 (65%)
 Frame = -3

Query: 529 FMLYEICVKLRSFVYLLLHSTYIY*LLAHFRIEYQLPNSIVGAITKESLYDAFENGITAV 350
           F++ E   ++ ++    LHS     L    RIEYQLPN IVGAITKESLY+AFENGITA 
Sbjct: 275 FVVVETNFRMYAYSTSRLHSEI---LRLFSRIEYQLPNLIVGAITKESLYNAFENGITAE 331

Query: 349 QIVSFLKQNAHPRVAQKIQVSF*TGTTQVPYNPTPEI 239
           QIVSFL+QNAHPRVA+KI          VP N T +I
Sbjct: 332 QIVSFLQQNAHPRVAEKIPT--------VPENVTDQI 360


>ref|XP_020113267.1| RNA polymerase II transcription factor B subunit 2 isoform X1
           [Ananas comosus]
          Length = 452

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 54/97 (55%), Positives = 64/97 (65%)
 Frame = -3

Query: 529 FMLYEICVKLRSFVYLLLHSTYIY*LLAHFRIEYQLPNSIVGAITKESLYDAFENGITAV 350
           F++ E   ++ ++    LHS     L    RIEYQLPN IVGAITKESLY+AFENGITA 
Sbjct: 298 FVVVETNFRMYAYSTSRLHSEI---LRLFSRIEYQLPNLIVGAITKESLYNAFENGITAE 354

Query: 349 QIVSFLKQNAHPRVAQKIQVSF*TGTTQVPYNPTPEI 239
           QIVSFL+QNAHPRVA+KI          VP N T +I
Sbjct: 355 QIVSFLQQNAHPRVAEKIPT--------VPENVTDQI 383


>gb|PNT62154.1| hypothetical protein BRADI_5g26360v3 [Brachypodium distachyon]
 gb|PNT62156.1| hypothetical protein BRADI_5g26360v3 [Brachypodium distachyon]
          Length = 307

 Score = 87.8 bits (216), Expect = 4e-16
 Identities = 47/67 (70%), Positives = 51/67 (76%)
 Frame = -3

Query: 439 RIEYQLPNSIVGAITKESLYDAFENGITAVQIVSFLKQNAHPRVAQKIQVSF*TGTTQVP 260
           R+EYQLPN IVGAITKESLY AF+NGITA QI+SFLKQNAHPRVA KI V        VP
Sbjct: 181 RVEYQLPNLIVGAITKESLYGAFDNGITAEQIISFLKQNAHPRVADKIPV--------VP 232

Query: 259 YNPTPEI 239
            N T +I
Sbjct: 233 ENVTDQI 239


>ref|XP_014750931.1| PREDICTED: general transcription factor IIH subunit 4-like isoform
           X2 [Brachypodium distachyon]
          Length = 391

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 46/68 (67%), Positives = 52/68 (76%)
 Frame = -3

Query: 439 RIEYQLPNSIVGAITKESLYDAFENGITAVQIVSFLKQNAHPRVAQKIQVSF*TGTTQVP 260
           R+EYQLPN IVGAITKESLY AF+NGITA QI+SFLKQNAHPRVA KI V        VP
Sbjct: 325 RVEYQLPNLIVGAITKESLYGAFDNGITAEQIISFLKQNAHPRVADKIPV--------VP 376

Query: 259 YNPTPEIM 236
            N T +++
Sbjct: 377 ENVTDQVV 384


>ref|XP_020581220.1| RNA polymerase II transcription factor B subunit 2-like isoform X2
           [Phalaenopsis equestris]
          Length = 451

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 52/97 (53%), Positives = 63/97 (64%)
 Frame = -3

Query: 529 FMLYEICVKLRSFVYLLLHSTYIY*LLAHFRIEYQLPNSIVGAITKESLYDAFENGITAV 350
           FM+ E   +L ++    LHS     L    RIEYQLPN IVGAITKESLY AFENGITA 
Sbjct: 298 FMVVETNFRLYAYSTSKLHSEI---LRLFSRIEYQLPNLIVGAITKESLYTAFENGITAD 354

Query: 349 QIVSFLKQNAHPRVAQKIQVSF*TGTTQVPYNPTPEI 239
           QI+SFL+QNAHPR+A+++          VP N T +I
Sbjct: 355 QIISFLQQNAHPRIAERVPT--------VPENVTDQI 383


>ref|XP_020581219.1| RNA polymerase II transcription factor B subunit 2-like isoform X1
           [Phalaenopsis equestris]
          Length = 452

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 52/97 (53%), Positives = 63/97 (64%)
 Frame = -3

Query: 529 FMLYEICVKLRSFVYLLLHSTYIY*LLAHFRIEYQLPNSIVGAITKESLYDAFENGITAV 350
           FM+ E   +L ++    LHS     L    RIEYQLPN IVGAITKESLY AFENGITA 
Sbjct: 299 FMVVETNFRLYAYSTSKLHSEI---LRLFSRIEYQLPNLIVGAITKESLYTAFENGITAD 355

Query: 349 QIVSFLKQNAHPRVAQKIQVSF*TGTTQVPYNPTPEI 239
           QI+SFL+QNAHPR+A+++          VP N T +I
Sbjct: 356 QIISFLQQNAHPRIAERVPT--------VPENVTDQI 384


>ref|XP_020584028.1| LOW QUALITY PROTEIN: RNA polymerase II transcription factor B
           subunit 2-like [Phalaenopsis equestris]
          Length = 455

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 52/97 (53%), Positives = 63/97 (64%)
 Frame = -3

Query: 529 FMLYEICVKLRSFVYLLLHSTYIY*LLAHFRIEYQLPNSIVGAITKESLYDAFENGITAV 350
           FM+ E   +L ++    LHS     L    RIEYQLPN IVGAITKESLY AFENGITA 
Sbjct: 302 FMVVETNFRLYAYSTSKLHSEI---LRLFSRIEYQLPNLIVGAITKESLYTAFENGITAD 358

Query: 349 QIVSFLKQNAHPRVAQKIQVSF*TGTTQVPYNPTPEI 239
           QI+SFL+QNAHPR+A+++          VP N T +I
Sbjct: 359 QIISFLQQNAHPRIAERVPT--------VPENVTDQI 387


>ref|XP_013460803.1| transcription factor [Medicago truncatula]
 gb|KEH34837.1| transcription factor [Medicago truncatula]
          Length = 392

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 45/70 (64%), Positives = 54/70 (77%)
 Frame = -3

Query: 439 RIEYQLPNSIVGAITKESLYDAFENGITAVQIVSFLKQNAHPRVAQKIQVSF*TGTTQVP 260
           R+EYQLPN IVGAITKESLY+AF+NGITA QIVSFL+QNAHPRVAQ++          VP
Sbjct: 319 RVEYQLPNLIVGAITKESLYNAFDNGITADQIVSFLRQNAHPRVAQRVPA--------VP 370

Query: 259 YNPTPEIMFL 230
            N T +++ L
Sbjct: 371 ENVTDQVLSL 380


>ref|XP_003580836.1| PREDICTED: general transcription factor IIH subunit 4-like isoform
           X1 [Brachypodium distachyon]
 gb|KQJ85331.1| hypothetical protein BRADI_5g26360v3 [Brachypodium distachyon]
 gb|PNT62155.1| hypothetical protein BRADI_5g26360v3 [Brachypodium distachyon]
          Length = 451

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 47/67 (70%), Positives = 51/67 (76%)
 Frame = -3

Query: 439 RIEYQLPNSIVGAITKESLYDAFENGITAVQIVSFLKQNAHPRVAQKIQVSF*TGTTQVP 260
           R+EYQLPN IVGAITKESLY AF+NGITA QI+SFLKQNAHPRVA KI V        VP
Sbjct: 325 RVEYQLPNLIVGAITKESLYGAFDNGITAEQIISFLKQNAHPRVADKIPV--------VP 376

Query: 259 YNPTPEI 239
            N T +I
Sbjct: 377 ENVTDQI 383


>ref|XP_013460799.1| transcription factor [Medicago truncatula]
 gb|KEH34833.1| transcription factor [Medicago truncatula]
          Length = 399

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 45/70 (64%), Positives = 54/70 (77%)
 Frame = -3

Query: 439 RIEYQLPNSIVGAITKESLYDAFENGITAVQIVSFLKQNAHPRVAQKIQVSF*TGTTQVP 260
           R+EYQLPN IVGAITKESLY+AF+NGITA QIVSFL+QNAHPRVAQ++          VP
Sbjct: 326 RVEYQLPNLIVGAITKESLYNAFDNGITADQIVSFLRQNAHPRVAQRVPA--------VP 377

Query: 259 YNPTPEIMFL 230
            N T +++ L
Sbjct: 378 ENVTDQVLSL 387


>gb|PNT62153.1| hypothetical protein BRADI_5g26360v3 [Brachypodium distachyon]
          Length = 481

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 47/67 (70%), Positives = 51/67 (76%)
 Frame = -3

Query: 439 RIEYQLPNSIVGAITKESLYDAFENGITAVQIVSFLKQNAHPRVAQKIQVSF*TGTTQVP 260
           R+EYQLPN IVGAITKESLY AF+NGITA QI+SFLKQNAHPRVA KI V        VP
Sbjct: 355 RVEYQLPNLIVGAITKESLYGAFDNGITAEQIISFLKQNAHPRVADKIPV--------VP 406

Query: 259 YNPTPEI 239
            N T +I
Sbjct: 407 ENVTDQI 413


>gb|PIA44016.1| hypothetical protein AQUCO_01800227v1 [Aquilegia coerulea]
          Length = 416

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 46/67 (68%), Positives = 52/67 (77%)
 Frame = -3

Query: 439 RIEYQLPNSIVGAITKESLYDAFENGITAVQIVSFLKQNAHPRVAQKIQVSF*TGTTQVP 260
           R+EYQLPN IVGAITKESLY+AFENGITA QI+SFL+QNAHPRVA+K        T  VP
Sbjct: 325 RVEYQLPNLIVGAITKESLYNAFENGITADQIISFLQQNAHPRVAEK--------TPSVP 376

Query: 259 YNPTPEI 239
            N T +I
Sbjct: 377 ENVTDQI 383


>gb|PIA41892.1| hypothetical protein AQUCO_02100016v1 [Aquilegia coerulea]
          Length = 428

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 46/67 (68%), Positives = 52/67 (77%)
 Frame = -3

Query: 439 RIEYQLPNSIVGAITKESLYDAFENGITAVQIVSFLKQNAHPRVAQKIQVSF*TGTTQVP 260
           R+EYQLPN IVGAITKESLY+AFENGITA QI+SFL+QNAHPRVA+K        T  VP
Sbjct: 302 RVEYQLPNLIVGAITKESLYNAFENGITADQIISFLQQNAHPRVAEK--------TPSVP 353

Query: 259 YNPTPEI 239
            N T +I
Sbjct: 354 ENVTDQI 360


>ref|XP_013460805.1| transcription factor [Medicago truncatula]
 gb|KEH34839.1| transcription factor [Medicago truncatula]
          Length = 320

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/67 (67%), Positives = 52/67 (77%)
 Frame = -3

Query: 439 RIEYQLPNSIVGAITKESLYDAFENGITAVQIVSFLKQNAHPRVAQKIQVSF*TGTTQVP 260
           R+EYQLPN IVGAITKESLY+AF+NGITA QIVSFL+QNAHPRVAQ++          VP
Sbjct: 194 RVEYQLPNLIVGAITKESLYNAFDNGITADQIVSFLRQNAHPRVAQRVPA--------VP 245

Query: 259 YNPTPEI 239
            N T +I
Sbjct: 246 ENVTDQI 252


>ref|XP_012091582.1| RNA polymerase II transcription factor B subunit 2 [Jatropha
           curcas]
 gb|KDP20952.1| hypothetical protein JCGZ_21423 [Jatropha curcas]
          Length = 450

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 46/67 (68%), Positives = 52/67 (77%)
 Frame = -3

Query: 439 RIEYQLPNSIVGAITKESLYDAFENGITAVQIVSFLKQNAHPRVAQKIQVSF*TGTTQVP 260
           R+EYQLPN IVGAITKESLY+AFENGITA QI+SFL+QNAHPRVA+KI          VP
Sbjct: 324 RVEYQLPNLIVGAITKESLYNAFENGITAEQIISFLQQNAHPRVAEKIPT--------VP 375

Query: 259 YNPTPEI 239
            N T +I
Sbjct: 376 ENVTDQI 382


>gb|PIA44014.1| hypothetical protein AQUCO_01800227v1 [Aquilegia coerulea]
 gb|PIA44015.1| hypothetical protein AQUCO_01800227v1 [Aquilegia coerulea]
          Length = 451

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 46/67 (68%), Positives = 52/67 (77%)
 Frame = -3

Query: 439 RIEYQLPNSIVGAITKESLYDAFENGITAVQIVSFLKQNAHPRVAQKIQVSF*TGTTQVP 260
           R+EYQLPN IVGAITKESLY+AFENGITA QI+SFL+QNAHPRVA+K        T  VP
Sbjct: 325 RVEYQLPNLIVGAITKESLYNAFENGITADQIISFLQQNAHPRVAEK--------TPSVP 376

Query: 259 YNPTPEI 239
            N T +I
Sbjct: 377 ENVTDQI 383