BLASTX nr result
ID: Cheilocostus21_contig00049221
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00049221
(743 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1] 140 4e-40
ref|NP_569153.1| unknown [Citrus yellow mosaic virus] >gi|164169... 133 2e-38
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus] 133 2e-38
gb|ACH86210.1| unknown [Citrus yellow mosaic virus] 132 3e-38
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus] 132 3e-38
gb|ATZ69486.1| ORF3 polyprotein [Cacao swollen shoot Ghana N virus] 132 4e-38
gb|AER00538.1| ORF III [Citrus yellow mosaic virus] 131 6e-38
emb|CEH19729.1| polyprotein, partial [Grapevine roditis leaf dis... 131 6e-38
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus] 130 9e-38
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus] 130 9e-38
gb|ANK58545.1| polyprotein [Fig badnavirus 1] 129 1e-37
gb|AOI28218.1| polyprotein, partial [Fig badnavirus 1] 129 1e-37
gb|AOI28216.1| polyprotein, partial [Fig badnavirus 1] >gi|10614... 129 1e-37
gb|AER45369.1| polyprotein, partial [Fig badnavirus 1] 129 2e-37
gb|AER45361.1| polyprotein, partial [Fig badnavirus 1] 129 2e-37
gb|AER00544.1| ORF III [Citrus yellow mosaic virus] 131 3e-37
gb|ASG91853.1| polyprotein [Cacao swollen shoot virus] 130 4e-37
gb|ANK58548.1| polyprotein [Fig badnavirus 1] 127 6e-37
gb|ANK58539.1| polyprotein [Fig badnavirus 1] 127 6e-37
gb|ANK58536.1| polyprotein [Fig badnavirus 1] 127 6e-37
>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
Length = 1846
Score = 140 bits (354), Expect(2) = 4e-40
Identities = 77/121 (63%), Positives = 88/121 (72%), Gaps = 4/121 (3%)
Frame = +2
Query: 302 PSHED*IRRYRQNQRRLFTMQ*WV----NCITGRRYNYTLEHHVNPEEHLQLSLHERLNL 469
P +ED IR YR+ QRR F + + ITGRR+N TLE VNPEE LQ S+ ER NL
Sbjct: 24 PLYEDQIRDYRRGQRRRFVARQAARRIASRITGRRFNQTLEQVVNPEESLQQSMQERANL 83
Query: 470 VPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESYAELQRSGMQFIHIGL 649
VPA VLYRSRRDD NHRVY H+SEEAI CVDGQ DR VIQ +SY L+RSG QFIH+G+
Sbjct: 84 VPAEVLYRSRRDDINHRVYSHRSEEAILCVDGQQQDRLVIQPDSYEALRRSGFQFIHLGI 143
Query: 650 M 652
M
Sbjct: 144 M 144
Score = 53.1 bits (126), Expect(2) = 4e-40
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VR+QILHR +EGT LVVFRDNRWQGDQ+
Sbjct: 146 VRIQILHRADEGTAALVVFRDNRWQGDQA 174
>ref|NP_569153.1| unknown [Citrus yellow mosaic virus]
gb|AAL18495.1|AF347695_3 unknown [Citrus yellow mosaic virus]
Length = 1983
Score = 133 bits (334), Expect(2) = 2e-38
Identities = 72/130 (55%), Positives = 89/130 (68%)
Frame = +2
Query: 263 PSVSERVSIVEEGPSHED*IRRYRQNQRRLFTMQ*WVNCITGRRYNYTLEHHVNPEEHLQ 442
P+ + RV + P ++D IR YRQ QRR M N + GR YN TLE V+PE LQ
Sbjct: 15 PATTARVEERDNTPLYDDQIRDYRQWQRRRHNMGRRWNQLIGRPYNQTLEQVVDPEVALQ 74
Query: 443 LSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESYAELQRS 622
LS+ ER LVPA VLYRSR DD +H+VYIH+SEEAI CVDG +DR +IQ ES +L RS
Sbjct: 75 LSMQERARLVPAEVLYRSRTDDRHHQVYIHKSEEAILCVDGDQVDRLLIQPESAEQLSRS 134
Query: 623 GMQFIHIGLM 652
GM FIH+G++
Sbjct: 135 GMSFIHMGIV 144
Score = 55.1 bits (131), Expect(2) = 2e-38
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VR+QILHR++EGT LVVFRDNRWQGDQS
Sbjct: 146 VRIQILHRQHEGTTALVVFRDNRWQGDQS 174
>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
Length = 1967
Score = 133 bits (334), Expect(2) = 2e-38
Identities = 72/130 (55%), Positives = 88/130 (67%)
Frame = +2
Query: 263 PSVSERVSIVEEGPSHED*IRRYRQNQRRLFTMQ*WVNCITGRRYNYTLEHHVNPEEHLQ 442
P+ + RV P ++D IR YRQ QRR M N + GR YN TLE V+PE LQ
Sbjct: 15 PATTSRVEERNNTPLYDDQIRDYRQWQRRRHNMGRRWNQLMGRPYNQTLEQVVDPEVALQ 74
Query: 443 LSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESYAELQRS 622
LS+ ER LVPA VLYRSR DD +H+VYIH+SEEAI CVDG +DR +IQ ES +L RS
Sbjct: 75 LSMQERARLVPAEVLYRSRNDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRS 134
Query: 623 GMQFIHIGLM 652
GM FIH+G++
Sbjct: 135 GMSFIHMGIV 144
Score = 55.1 bits (131), Expect(2) = 2e-38
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VR+QILHR++EGT LVVFRDNRWQGDQS
Sbjct: 146 VRIQILHRQHEGTTALVVFRDNRWQGDQS 174
>gb|ACH86210.1| unknown [Citrus yellow mosaic virus]
Length = 463
Score = 132 bits (333), Expect(2) = 3e-38
Identities = 72/130 (55%), Positives = 88/130 (67%)
Frame = +2
Query: 263 PSVSERVSIVEEGPSHED*IRRYRQNQRRLFTMQ*WVNCITGRRYNYTLEHHVNPEEHLQ 442
P+ + RV P ++D IR YRQ QRR M N + GR YN TLE V+PE LQ
Sbjct: 15 PATTARVEERNNTPLYDDQIRDYRQWQRRRHNMGRRWNQLIGRPYNQTLEQVVDPEVALQ 74
Query: 443 LSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESYAELQRS 622
LS+ ER LVPA VLYRSR DD +H+VYIH+SEEAI CVDG +DR +IQ ES +L RS
Sbjct: 75 LSMQERARLVPAEVLYRSRNDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRS 134
Query: 623 GMQFIHIGLM 652
GM FIH+G++
Sbjct: 135 GMSFIHMGIV 144
Score = 55.1 bits (131), Expect(2) = 3e-38
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VR+QILHR++EGT LVVFRDNRWQGDQS
Sbjct: 146 VRIQILHRQHEGTTALVVFRDNRWQGDQS 174
>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
Length = 1968
Score = 132 bits (332), Expect(2) = 3e-38
Identities = 72/130 (55%), Positives = 88/130 (67%)
Frame = +2
Query: 263 PSVSERVSIVEEGPSHED*IRRYRQNQRRLFTMQ*WVNCITGRRYNYTLEHHVNPEEHLQ 442
P + RV + P ++D IR YRQ QRR M N + GR YN TLE V+PE LQ
Sbjct: 15 PVTTSRVDERDNTPLYDDQIRDYRQWQRRRHNMGRRWNQLIGRPYNQTLEQVVDPEVALQ 74
Query: 443 LSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESYAELQRS 622
LS+ ER LVPA VLYRSR DD +H+VYIH+SEEAI CVDG +DR +IQ ES +L RS
Sbjct: 75 LSMQERARLVPAEVLYRSRSDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRS 134
Query: 623 GMQFIHIGLM 652
GM FIH+G++
Sbjct: 135 GMSFIHMGIV 144
Score = 55.1 bits (131), Expect(2) = 3e-38
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VR+QILHR++EGT LVVFRDNRWQGDQS
Sbjct: 146 VRIQILHRQHEGTTALVVFRDNRWQGDQS 174
>gb|ATZ69486.1| ORF3 polyprotein [Cacao swollen shoot Ghana N virus]
Length = 1881
Score = 132 bits (333), Expect(2) = 4e-38
Identities = 75/135 (55%), Positives = 90/135 (66%), Gaps = 5/135 (3%)
Frame = +2
Query: 263 PSVSE-RVSIVEEGPSHED*IRRYRQNQRRLFTMQ*WVN----CITGRRYNYTLEHHVNP 427
PSV++ R + P ED +R YRQNQRRLF +Q +TGRRY TLE V+P
Sbjct: 11 PSVTDGRGRQRDNTPLFEDQVRDYRQNQRRLFNLQRATRRLRGSVTGRRYQDTLEQEVDP 70
Query: 428 EEHLQLSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESYA 607
+ L+LS+ ER LVPA VLYRSRRD +HRVY H+SEE+I C DG IDR IQ ES
Sbjct: 71 QAALRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESILCTDGNQIDRTFIQPESLE 130
Query: 608 ELQRSGMQFIHIGLM 652
LQRSGM FIHIG++
Sbjct: 131 RLQRSGMAFIHIGIL 145
Score = 54.3 bits (129), Expect(2) = 4e-38
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VR+QILHR+ EGT+ LVVFRDNRW+GDQS
Sbjct: 147 VRIQILHRQEEGTMALVVFRDNRWEGDQS 175
>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
Length = 1982
Score = 131 bits (330), Expect(2) = 6e-38
Identities = 71/130 (54%), Positives = 89/130 (68%)
Frame = +2
Query: 263 PSVSERVSIVEEGPSHED*IRRYRQNQRRLFTMQ*WVNCITGRRYNYTLEHHVNPEEHLQ 442
P+ + RV + P ++D IR YRQ Q+R M N + GR YN TLE V+PE LQ
Sbjct: 15 PATTSRVEERDNTPLYDDQIRDYRQWQQRRHNMGRRWNQLIGRPYNQTLEQVVDPEVALQ 74
Query: 443 LSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESYAELQRS 622
LS+ ER LVPA VLYRSR DD +H+VYIH+SEEAI CVDG +DR +IQ ES +L RS
Sbjct: 75 LSMQERARLVPAEVLYRSRSDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRS 134
Query: 623 GMQFIHIGLM 652
GM FIH+G++
Sbjct: 135 GMPFIHMGIV 144
Score = 55.1 bits (131), Expect(2) = 6e-38
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VR+QILHR++EGT LVVFRDNRWQGDQS
Sbjct: 146 VRIQILHRQHEGTTALVVFRDNRWQGDQS 174
>emb|CEH19729.1| polyprotein, partial [Grapevine roditis leaf
discoloration-associated virus]
Length = 234
Score = 131 bits (330), Expect(2) = 6e-38
Identities = 77/145 (53%), Positives = 97/145 (66%), Gaps = 7/145 (4%)
Frame = +2
Query: 239 SKMASAPRPSVSERVSIV---EEGPSHED*IRRYRQNQRRLFT----MQ*WVNCITGRRY 397
S+ + P+VS R S + P ED +R YR+NQRR F ++ V I GRRY
Sbjct: 4 SRTTTQQLPAVSSRRSESIHNRDQPLFEDQVRDYRRNQRRRFVAEQALRRTVGRIRGRRY 63
Query: 398 NYTLEHHVNPEEHLQLSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*ID 577
N TLE VNPEE L S+ ER NLVPA VLYR+RRD+ NH+VY H+SEEA+ CV G+ D
Sbjct: 64 NQTLEQTVNPEEELSQSMQERANLVPAEVLYRTRRDNINHQVYNHRSEEAMLCV-GEQQD 122
Query: 578 RQVIQNESYAELQRSGMQFIHIGLM 652
R IQ +S+ ELQRSGMQFIH+G++
Sbjct: 123 RSFIQPDSFQELQRSGMQFIHLGVL 147
Score = 55.1 bits (131), Expect(2) = 6e-38
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VR+QILHR +EGT+ LVVFRDNRWQGDQS
Sbjct: 149 VRIQILHRADEGTMALVVFRDNRWQGDQS 177
>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
Length = 1979
Score = 130 bits (328), Expect(2) = 9e-38
Identities = 71/130 (54%), Positives = 89/130 (68%)
Frame = +2
Query: 263 PSVSERVSIVEEGPSHED*IRRYRQNQRRLFTMQ*WVNCITGRRYNYTLEHHVNPEEHLQ 442
P+ + RV + P ++D IR YRQ QRR M N + GR YN TLE V+PE LQ
Sbjct: 15 PATTSRVEERDNTPLYDDQIRDYRQWQRRRHNMGRRWNQLIGRPYNQTLEQVVDPEVALQ 74
Query: 443 LSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESYAELQRS 622
LS+ ER LVPA VLYRSR DD +H+VYIH+SEEAI CVDG +DR +IQ ES +L RS
Sbjct: 75 LSMQERARLVPAEVLYRSRSDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRS 134
Query: 623 GMQFIHIGLM 652
GM FI++G++
Sbjct: 135 GMSFINMGIV 144
Score = 55.1 bits (131), Expect(2) = 9e-38
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VR+QILHR++EGT LVVFRDNRWQGDQS
Sbjct: 146 VRIQILHRQHEGTTALVVFRDNRWQGDQS 174
>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
Length = 1976
Score = 130 bits (328), Expect(2) = 9e-38
Identities = 71/130 (54%), Positives = 89/130 (68%)
Frame = +2
Query: 263 PSVSERVSIVEEGPSHED*IRRYRQNQRRLFTMQ*WVNCITGRRYNYTLEHHVNPEEHLQ 442
P+ + RV + P ++D IR YRQ QRR M N + GR YN TLE V+PE LQ
Sbjct: 15 PATTSRVEERDNTPLYDDQIRDYRQWQRRRHNMGRRWNQLIGRPYNQTLEQVVDPEVALQ 74
Query: 443 LSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESYAELQRS 622
LS+ ER LVPA VLYRSR DD +H+VYIH+SEEAI CVDG +DR +IQ ES +L RS
Sbjct: 75 LSMQERARLVPAEVLYRSRSDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRS 134
Query: 623 GMQFIHIGLM 652
GM FI++G++
Sbjct: 135 GMSFINMGIV 144
Score = 55.1 bits (131), Expect(2) = 9e-38
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VR+QILHR++EGT LVVFRDNRWQGDQS
Sbjct: 146 VRIQILHRQHEGTTALVVFRDNRWQGDQS 174
>gb|ANK58545.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 129 bits (325), Expect(2) = 1e-37
Identities = 75/136 (55%), Positives = 90/136 (66%), Gaps = 4/136 (2%)
Frame = +2
Query: 257 PRPSVSERVSIVEEGPSHED*IRRYRQNQRRLFTMQ*WVNC----ITGRRYNYTLEHHVN 424
P S R I + P ED IR YR+NQRR F + V + GRRYN TLE V+
Sbjct: 12 PAVSTRRREEINRDQPLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVD 71
Query: 425 PEEHLQLSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESY 604
PE L LS+ ER NLVPA VLYRSRRD+ NH+VY H+SEEA+ CV G+ DR IQ S+
Sbjct: 72 PEVELNLSMQERANLVPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSF 130
Query: 605 AELQRSGMQFIHIGLM 652
ELQRSGMQFIH+G++
Sbjct: 131 QELQRSGMQFIHLGVL 146
Score = 55.8 bits (133), Expect(2) = 1e-37
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VRLQILHR +EGT+ LVVFRDNRWQGDQS
Sbjct: 148 VRLQILHRADEGTMALVVFRDNRWQGDQS 176
>gb|AOI28218.1| polyprotein, partial [Fig badnavirus 1]
Length = 196
Score = 129 bits (325), Expect(2) = 1e-37
Identities = 75/136 (55%), Positives = 90/136 (66%), Gaps = 4/136 (2%)
Frame = +2
Query: 257 PRPSVSERVSIVEEGPSHED*IRRYRQNQRRLFTMQ*WVNC----ITGRRYNYTLEHHVN 424
P S R I + P ED IR YR+NQRR F + V + GRRYN TLE V+
Sbjct: 12 PAVSTRRREEINRDQPLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVD 71
Query: 425 PEEHLQLSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESY 604
PE L LS+ ER NLVPA VLYRSRRD+ NH+VY H+SEEA+ CV G+ DR IQ S+
Sbjct: 72 PEVELNLSMQERANLVPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSF 130
Query: 605 AELQRSGMQFIHIGLM 652
ELQRSGMQFIH+G++
Sbjct: 131 QELQRSGMQFIHLGVL 146
Score = 55.8 bits (133), Expect(2) = 1e-37
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VRLQILHR +EGT+ LVVFRDNRWQGDQS
Sbjct: 148 VRLQILHRADEGTMALVVFRDNRWQGDQS 176
>gb|AOI28216.1| polyprotein, partial [Fig badnavirus 1]
gb|AOI28222.1| polyprotein, partial [Fig badnavirus 1]
Length = 196
Score = 129 bits (325), Expect(2) = 1e-37
Identities = 75/136 (55%), Positives = 90/136 (66%), Gaps = 4/136 (2%)
Frame = +2
Query: 257 PRPSVSERVSIVEEGPSHED*IRRYRQNQRRLFTMQ*WVNC----ITGRRYNYTLEHHVN 424
P S R I + P ED IR YR+NQRR F + V + GRRYN TLE V+
Sbjct: 12 PAVSTRRREEINRDQPLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVD 71
Query: 425 PEEHLQLSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESY 604
PE L LS+ ER NLVPA VLYRSRRD+ NH+VY H+SEEA+ CV G+ DR IQ S+
Sbjct: 72 PEVELNLSMQERANLVPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSF 130
Query: 605 AELQRSGMQFIHIGLM 652
ELQRSGMQFIH+G++
Sbjct: 131 QELQRSGMQFIHLGVL 146
Score = 55.8 bits (133), Expect(2) = 1e-37
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VRLQILHR +EGT+ LVVFRDNRWQGDQS
Sbjct: 148 VRLQILHRTDEGTMALVVFRDNRWQGDQS 176
>gb|AER45369.1| polyprotein, partial [Fig badnavirus 1]
Length = 198
Score = 129 bits (323), Expect(2) = 2e-37
Identities = 75/136 (55%), Positives = 89/136 (65%), Gaps = 4/136 (2%)
Frame = +2
Query: 257 PRPSVSERVSIVEEGPSHED*IRRYRQNQRRLFTMQ*WVNCITGR----RYNYTLEHHVN 424
P S R I + P ED IR YR+NQRR F + V TGR RYN TLE V+
Sbjct: 12 PAVSTRRREEINRDQPLFEDQIRDYRRNQRRRFVAEQAVRRTTGRMRGRRYNQTLEQIVD 71
Query: 425 PEEHLQLSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESY 604
PE L S+ ER NLVPA VLYRSRRD+ NH+VY H+SEEA+ CV G+ DR IQ S+
Sbjct: 72 PEVELNQSMQERANLVPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSF 130
Query: 605 AELQRSGMQFIHIGLM 652
ELQRSGMQFIH+G++
Sbjct: 131 QELQRSGMQFIHLGVL 146
Score = 55.8 bits (133), Expect(2) = 2e-37
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VRLQILHR +EGT+ LVVFRDNRWQGDQS
Sbjct: 148 VRLQILHRTDEGTMALVVFRDNRWQGDQS 176
>gb|AER45361.1| polyprotein, partial [Fig badnavirus 1]
Length = 198
Score = 129 bits (323), Expect(2) = 2e-37
Identities = 75/136 (55%), Positives = 89/136 (65%), Gaps = 4/136 (2%)
Frame = +2
Query: 257 PRPSVSERVSIVEEGPSHED*IRRYRQNQRRLFTMQ*WVNCITGR----RYNYTLEHHVN 424
P S R I + P ED IR YR+NQRR F + V TGR RYN TLE V+
Sbjct: 12 PAVSTRRREEINRDQPLFEDQIRDYRRNQRRRFVAEQAVRRTTGRMRGRRYNQTLEQIVD 71
Query: 425 PEEHLQLSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESY 604
PE L S+ ER NLVPA VLYRSRRD+ NH+VY H+SEEA+ CV G+ DR IQ S+
Sbjct: 72 PEVELNQSMQERANLVPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSF 130
Query: 605 AELQRSGMQFIHIGLM 652
ELQRSGMQFIH+G++
Sbjct: 131 QELQRSGMQFIHLGVL 146
Score = 55.8 bits (133), Expect(2) = 2e-37
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VRLQILHR +EGT+ LVVFRDNRWQGDQS
Sbjct: 148 VRLQILHRADEGTMALVVFRDNRWQGDQS 176
>gb|AER00544.1| ORF III [Citrus yellow mosaic virus]
Length = 1976
Score = 131 bits (330), Expect(2) = 3e-37
Identities = 71/130 (54%), Positives = 89/130 (68%)
Frame = +2
Query: 263 PSVSERVSIVEEGPSHED*IRRYRQNQRRLFTMQ*WVNCITGRRYNYTLEHHVNPEEHLQ 442
P+ + RV + P ++D IR YRQ Q+R M N + GR YN TLE V+PE LQ
Sbjct: 15 PATTSRVEERDNTPLYDDQIRDYRQWQQRRHNMGRRWNQLIGRPYNQTLEQVVDPEVALQ 74
Query: 443 LSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESYAELQRS 622
LS+ ER LVPA VLYRSR DD +H+VYIH+SEEAI CVDG +DR +IQ ES +L RS
Sbjct: 75 LSMQERARLVPAEVLYRSRSDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRS 134
Query: 623 GMQFIHIGLM 652
GM FIH+G++
Sbjct: 135 GMPFIHMGIV 144
Score = 52.8 bits (125), Expect(2) = 3e-37
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VR+ ILHR++EGT LVVFRDNRWQGDQS
Sbjct: 146 VRIPILHRQHEGTTALVVFRDNRWQGDQS 174
>gb|ASG91853.1| polyprotein [Cacao swollen shoot virus]
Length = 1847
Score = 130 bits (327), Expect(2) = 4e-37
Identities = 70/137 (51%), Positives = 93/137 (67%), Gaps = 5/137 (3%)
Frame = +2
Query: 257 PRPSVSERVSIVE-EGPSHED*IRRYRQNQRRLFTMQ*WVN----CITGRRYNYTLEHHV 421
P PSV+ +S EGP +ED IR YR++QRR+F ++ +TG RY TLE +
Sbjct: 9 PVPSVTSTISEQNREGPLYEDQIRDYRRSQRRIFNLRRNARRLRRSMTGSRYQETLEQEI 68
Query: 422 NPEEHLQLSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNES 601
+P+ L+LS+ ER LVPA VLYRSRRD +HRVY H+SEE++ CV G +DR IQ ES
Sbjct: 69 DPQTTLRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESVLCVGGNQVDRAFIQPES 128
Query: 602 YAELQRSGMQFIHIGLM 652
+LQR+GM FIHIG++
Sbjct: 129 LEQLQRTGMSFIHIGIL 145
Score = 53.5 bits (127), Expect(2) = 4e-37
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VR+QILHR+ EGT+ LVVFRDNRW GDQS
Sbjct: 147 VRIQILHRQEEGTMALVVFRDNRWSGDQS 175
>gb|ANK58548.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 127 bits (319), Expect(2) = 6e-37
Identities = 74/136 (54%), Positives = 89/136 (65%), Gaps = 4/136 (2%)
Frame = +2
Query: 257 PRPSVSERVSIVEEGPSHED*IRRYRQNQRRLFTMQ*WVNC----ITGRRYNYTLEHHVN 424
P S R I + P ED IR YR+NQRR F + V + GRRYN TLE V+
Sbjct: 12 PAVSTRRREEINRDQPLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVD 71
Query: 425 PEEHLQLSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESY 604
PE L S+ ER NLVPA VLYRSRRD+ NH+VY H+SEEA+ CV G+ DR IQ S+
Sbjct: 72 PEVELNQSMQERANLVPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSF 130
Query: 605 AELQRSGMQFIHIGLM 652
ELQRSGMQFIH+G++
Sbjct: 131 QELQRSGMQFIHLGVL 146
Score = 55.8 bits (133), Expect(2) = 6e-37
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VRLQILHR +EGT+ LVVFRDNRWQGDQS
Sbjct: 148 VRLQILHRADEGTMALVVFRDNRWQGDQS 176
>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 127 bits (319), Expect(2) = 6e-37
Identities = 74/136 (54%), Positives = 89/136 (65%), Gaps = 4/136 (2%)
Frame = +2
Query: 257 PRPSVSERVSIVEEGPSHED*IRRYRQNQRRLFTMQ*WVNC----ITGRRYNYTLEHHVN 424
P S R I + P ED IR YR+NQRR F + V + GRRYN TLE V+
Sbjct: 12 PAVSTRRREEINRDQPLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVD 71
Query: 425 PEEHLQLSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESY 604
PE L S+ ER NLVPA VLYRSRRD+ NH+VY H+SEEA+ CV G+ DR IQ S+
Sbjct: 72 PEVELNQSMQERANLVPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSF 130
Query: 605 AELQRSGMQFIHIGLM 652
ELQRSGMQFIH+G++
Sbjct: 131 QELQRSGMQFIHLGVL 146
Score = 55.8 bits (133), Expect(2) = 6e-37
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VRLQILHR +EGT+ LVVFRDNRWQGDQS
Sbjct: 148 VRLQILHRADEGTMALVVFRDNRWQGDQS 176
>gb|ANK58536.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 127 bits (319), Expect(2) = 6e-37
Identities = 74/136 (54%), Positives = 89/136 (65%), Gaps = 4/136 (2%)
Frame = +2
Query: 257 PRPSVSERVSIVEEGPSHED*IRRYRQNQRRLFTMQ*WVNC----ITGRRYNYTLEHHVN 424
P S R I + P ED IR YR+NQRR F + V + GRRYN TLE V+
Sbjct: 12 PAVSTRRREEINRDQPLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVD 71
Query: 425 PEEHLQLSLHERLNLVPA*VLYRSRRDDENHRVYIHQSEEAISCVDGQ*IDRQVIQNESY 604
PE L S+ ER NLVPA VLYRSRRD+ NH+VY H+SEEA+ CV G+ DR IQ S+
Sbjct: 72 PEVELNQSMQERANLVPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSF 130
Query: 605 AELQRSGMQFIHIGLM 652
ELQRSGMQFIH+G++
Sbjct: 131 QELQRSGMQFIHLGVL 146
Score = 55.8 bits (133), Expect(2) = 6e-37
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1
Query: 655 VRLQILHRRNEGTITLVVFRDNRWQGDQS 741
VRLQILHR +EGT+ LVVFRDNRWQGDQS
Sbjct: 148 VRLQILHRTDEGTMALVVFRDNRWQGDQS 176