BLASTX nr result

ID: Cheilocostus21_contig00049208 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00049208
         (555 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009393361.1| PREDICTED: F-box/LRR-repeat protein 4 isofor...    44   8e-10
ref|XP_018679640.1| PREDICTED: F-box/LRR-repeat protein 4 isofor...    44   8e-10

>ref|XP_009393361.1| PREDICTED: F-box/LRR-repeat protein 4 isoform X1 [Musa acuminata
           subsp. malaccensis]
          Length = 605

 Score = 44.3 bits (103), Expect(3) = 8e-10
 Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +2

Query: 110 ACRRRITITGTGDADQQLDFILVRFTGL-CMFSYTICSIRFDQPQISTSSKRKRH 271
           ACRR I I  +G ADQ +D ++ RFTGL  ++      +   QPQ S  SKRKRH
Sbjct: 45  ACRRTIRIGASGTADQLVDLVVRRFTGLRNVYIDERLPVTTVQPQRSPPSKRKRH 99



 Score = 35.0 bits (79), Expect(3) = 8e-10
 Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 9/45 (20%)
 Frame = +3

Query: 333 SSLTLLAKNCKGLQKL---------RLELTMFADSCKDLGSLGLQ 440
           + L LLAK+CKGL+KL          L LT  A++CK L S+ LQ
Sbjct: 125 AGLALLAKSCKGLEKLSFIWCSSITSLGLTTVAENCKFLKSVDLQ 169



 Score = 30.8 bits (68), Expect(3) = 8e-10
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +3

Query: 36  IKGSGPFNTLFPDDLIPEIFFHMEA 110
           +KG    NT  PD+LI EIF H+EA
Sbjct: 1   MKGCDLVNTFLPDELIMEIFRHVEA 25


>ref|XP_018679640.1| PREDICTED: F-box/LRR-repeat protein 4 isoform X2 [Musa acuminata
           subsp. malaccensis]
          Length = 581

 Score = 44.3 bits (103), Expect(3) = 8e-10
 Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +2

Query: 110 ACRRRITITGTGDADQQLDFILVRFTGL-CMFSYTICSIRFDQPQISTSSKRKRH 271
           ACRR I I  +G ADQ +D ++ RFTGL  ++      +   QPQ S  SKRKRH
Sbjct: 45  ACRRTIRIGASGTADQLVDLVVRRFTGLRNVYIDERLPVTTVQPQRSPPSKRKRH 99



 Score = 35.0 bits (79), Expect(3) = 8e-10
 Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 9/45 (20%)
 Frame = +3

Query: 333 SSLTLLAKNCKGLQKL---------RLELTMFADSCKDLGSLGLQ 440
           + L LLAK+CKGL+KL          L LT  A++CK L S+ LQ
Sbjct: 125 AGLALLAKSCKGLEKLSFIWCSSITSLGLTTVAENCKFLKSVDLQ 169



 Score = 30.8 bits (68), Expect(3) = 8e-10
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +3

Query: 36  IKGSGPFNTLFPDDLIPEIFFHMEA 110
           +KG    NT  PD+LI EIF H+EA
Sbjct: 1   MKGCDLVNTFLPDELIMEIFRHVEA 25


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