BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00048920
         (1134 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OMO69396.1| Integrase, catalytic core [Corchorus capsularis]       570   0.0  
gb|OIT38695.1| retrovirus-related pol polyprotein from transposo...   527   0.0  
ref|XP_022565251.1| uncharacterized protein LOC111209564 [Brassi...   526   0.0  
gb|OIS96996.1| retrovirus-related pol polyprotein from transposo...   520   0.0  
ref|XP_014629708.1| PREDICTED: uncharacterized mitochondrial pro...   516   0.0  
ref|XP_020240016.1| uncharacterized protein LOC109818890 [Cajanu...   513   e-180
gb|ACN78973.1| copia-type polyprotein [Glycine max] >gi|22501615...   526   e-176
gb|OIT19970.1| retrovirus-related pol polyprotein from transposo...   500   e-174
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   524   e-172
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   522   e-171
gb|OIT04124.1| retrovirus-related pol polyprotein from transposo...   491   e-171
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             518   e-170
gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposo...   519   e-170
gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposo...   518   e-170
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   518   e-170
gb|OIS98682.1| retrovirus-related pol polyprotein from transposo...   488   e-169
gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposo...   517   e-169
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         517   e-169
gb|OIT20414.1| retrovirus-related pol polyprotein from transposo...   483   e-168
ref|XP_018674675.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   478   e-165

>gb|OMO69396.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 911

 Score =  570 bits (1470), Expect = 0.0
 Identities = 276/367 (75%), Positives = 317/367 (86%)
 Frame = -2

Query: 1133 GKVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLKKKNDEILIICLYVDD 954
            GKVLKL+KA YGLKQAPRSWNCRIDKYFQENGF+KCPYEHALY+K     ILI+CLYVDD
Sbjct: 540  GKVLKLKKAFYGLKQAPRSWNCRIDKYFQENGFLKCPYEHALYIKVSGSGILIVCLYVDD 599

Query: 953  LIFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKF 774
            LIFTGNN +M E FKRAMN+EFEMTDLGLMSYYLG+EVKQ + GIFI+QENYARE LKKF
Sbjct: 600  LIFTGNNPKMFEEFKRAMNREFEMTDLGLMSYYLGIEVKQMEEGIFITQENYAREVLKKF 659

Query: 773  NMSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYL 594
            NMSNCNPVNTPVE G K+S  DD +KVD TLFRSLVGSLRYL   R DI +GV L+SRY+
Sbjct: 660  NMSNCNPVNTPVECGIKLSISDDRNKVDTTLFRSLVGSLRYLISTRADILYGVGLVSRYM 719

Query: 593  EAPTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFF 414
            E+PT  HL+AAKRILRYIKGTL+FGL+Y  +++F+L GF DSDW GD DDRKSTT +VF+
Sbjct: 720  ESPTTMHLDAAKRILRYIKGTLDFGLFYSTSNDFRLRGFSDSDWGGDIDDRKSTTGFVFY 779

Query: 413  ISNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNK 234
            + + AFT SSKKQPIVTLSTCE EYVAL+SCVTQAIWLR L++EL FAQ EPT+V+VD+K
Sbjct: 780  MGDTAFTWSSKKQPIVTLSTCEVEYVALSSCVTQAIWLRSLLKELHFAQMEPTEVSVDSK 839

Query: 233  SAIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKE 54
            S I LAKNPLFHERSKHIDT FH++RECV +K VQLN+VK++EQVADIFTKALK  +F  
Sbjct: 840  SIIALAKNPLFHERSKHIDTGFHFVRECVANKVVQLNYVKSQEQVADIFTKALKINDFLR 899

Query: 53   LRSKLGL 33
            LR+ LG+
Sbjct: 900  LRNMLGV 906


>gb|OIT38695.1| retrovirus-related pol polyprotein from transposon tnt 1-94
            [Nicotiana attenuata]
          Length = 402

 Score =  527 bits (1358), Expect = 0.0
 Identities = 252/369 (68%), Positives = 309/369 (83%), Gaps = 1/369 (0%)
 Frame = -2

Query: 1130 KVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLK-KKNDEILIICLYVDD 954
            KVLKL+KALYGLKQAPR+WN RIDKYFQ NGF KCP+EHALY+K  KN +IL++CLYVDD
Sbjct: 32   KVLKLKKALYGLKQAPRAWNSRIDKYFQANGFSKCPHEHALYVKIAKNGDILLVCLYVDD 91

Query: 953  LIFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKF 774
            LIFTGNN +M E FK AM +EFEMTD+GLMSYYLG++V+Q   GIFISQ  YA+E LKKF
Sbjct: 92   LIFTGNNPKMFEEFKEAMAREFEMTDIGLMSYYLGIQVQQRKDGIFISQGEYAKEILKKF 151

Query: 773  NMSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYL 594
             M NCNPV+TPVE G KIS++ D + V+PT F+SLVGSLRYLTC RPDI +GVEL+SR++
Sbjct: 152  EMDNCNPVSTPVECGVKISKHGDGENVNPTFFKSLVGSLRYLTCTRPDILYGVELVSRFM 211

Query: 593  EAPTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFF 414
            EAPT +HL  AKRILRYIK TL++G+ Y  + + K  G+CDSDWAGD DDRKSTT +VFF
Sbjct: 212  EAPTTSHLKVAKRILRYIKDTLDYGILYSSSKDSKFVGYCDSDWAGDIDDRKSTTGFVFF 271

Query: 413  ISNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNK 234
            + N+AFT +SKKQPIVTLSTCEAEYVA  SCV  AIWLR L+EEL   QK+ T++ VDNK
Sbjct: 272  LGNSAFTWNSKKQPIVTLSTCEAEYVAACSCVCHAIWLRSLLEELHQPQKDATKIFVDNK 331

Query: 233  SAIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKE 54
            SAI+LAKNP+FHERSKHIDTR+H+IR+C+++K V+L HVK+++Q+ADIFTK LK + F++
Sbjct: 332  SAIELAKNPVFHERSKHIDTRYHFIRDCISNKVVELEHVKSQDQIADIFTKPLKIEVFQK 391

Query: 53   LRSKLGLQE 27
            LR  LG+ +
Sbjct: 392  LRMALGVMK 400


>ref|XP_022565251.1| uncharacterized protein LOC111209564 [Brassica napus]
          Length = 431

 Score =  526 bits (1355), Expect = 0.0
 Identities = 254/373 (68%), Positives = 306/373 (82%)
 Frame = -2

Query: 1130 KVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLKKKNDEILIICLYVDDL 951
            KVL+L+KALYGLKQAPR+WN RIDKYF+E  FIKCPYEHALY+K +N++ILI CLYVDDL
Sbjct: 55   KVLRLKKALYGLKQAPRAWNTRIDKYFKEKCFIKCPYEHALYIKTQNNDILIACLYVDDL 114

Query: 950  IFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKFN 771
            IFTGNN  M E FK  M +EFEMTD+GLMSYYLG+EVKQ + GIFI+QE+YA+E LKKF 
Sbjct: 115  IFTGNNPIMFEDFKMEMTKEFEMTDIGLMSYYLGIEVKQEENGIFITQESYAKEVLKKFK 174

Query: 770  MSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYLE 591
            M + NPV TP+E G K+S+ ++ + VDPTLF+SLVGSLRYLTC RPDI   V ++SRY+E
Sbjct: 175  MDDSNPVCTPMECGVKLSKEEEGESVDPTLFKSLVGSLRYLTCTRPDILHAVGVVSRYME 234

Query: 590  APTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFFI 411
             PT TH  AAKRILRYIKGT+NFGLYY I+D++KL G+ DSDW GD DDRKST+ +VFFI
Sbjct: 235  HPTTTHFKAAKRILRYIKGTINFGLYYSISDDYKLVGYSDSDWGGDVDDRKSTSGFVFFI 294

Query: 410  SNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNKS 231
               AFT  SKKQPIVTLSTCEAEYVA  SCV  AIWLR L++EL   Q+EPT++ V+N+S
Sbjct: 295  GEIAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELNLTQEEPTKIFVNNRS 354

Query: 230  AIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKEL 51
            AI LAKNP+FH+RSKHIDTR+HYIRECVT   VQL +VKT +QVADIFTK LK ++F ++
Sbjct: 355  AIALAKNPVFHDRSKHIDTRYHYIRECVTKMDVQLEYVKTNDQVADIFTKPLKREDFIKM 414

Query: 50   RSKLGLQEFQV*G 12
            RS LG+ +  + G
Sbjct: 415  RSLLGVTKSSLRG 427


>gb|OIS96996.1| retrovirus-related pol polyprotein from transposon tnt 1-94
            [Nicotiana attenuata]
          Length = 402

 Score =  520 bits (1339), Expect = 0.0
 Identities = 248/369 (67%), Positives = 306/369 (82%), Gaps = 1/369 (0%)
 Frame = -2

Query: 1130 KVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLK-KKNDEILIICLYVDD 954
            KV+KL+KALYGLKQAPR+WN RIDKY Q NGF KCP+EH LY+K  KN +IL++CLYVDD
Sbjct: 32   KVMKLKKALYGLKQAPRAWNSRIDKYIQANGFSKCPHEHTLYVKIAKNGDILLVCLYVDD 91

Query: 953  LIFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKF 774
            LIFTGNN +M E FK AM +EFEMTD+GLMSYYLG++V+Q   GIFISQ  YA+E LKKF
Sbjct: 92   LIFTGNNPKMFEEFKEAMAREFEMTDIGLMSYYLGIQVQQRKDGIFISQGEYAKEILKKF 151

Query: 773  NMSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYL 594
             M NCNPV+TPVE G KIS++ D + V+PT F+SLVGSLRYLTC RPDI +GV L+SR++
Sbjct: 152  EMDNCNPVSTPVECGVKISKHGDGENVNPTFFKSLVGSLRYLTCTRPDILYGVGLVSRFM 211

Query: 593  EAPTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFF 414
            EAPT +HL  AKRILRYIK TL++G+ Y  + + K  G+CDSDWAGD DDRKSTT +VFF
Sbjct: 212  EAPTTSHLKVAKRILRYIKDTLDYGILYSSSKDSKFVGYCDSDWAGDIDDRKSTTGFVFF 271

Query: 413  ISNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNK 234
            + N+AFT +SKKQPIVTLSTCEAEYVA  SCV  AIWLR L+EEL   QK+ T++ VDNK
Sbjct: 272  LGNSAFTWNSKKQPIVTLSTCEAEYVAACSCVCHAIWLRSLLEELHQPQKDATKIFVDNK 331

Query: 233  SAIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKE 54
            SAI+LAKNP+FHERSKHIDTR+H+IR+C+++K V+L HVK+++Q+ADIFTK LK + F++
Sbjct: 332  SAIELAKNPVFHERSKHIDTRYHFIRDCISNKVVELEHVKSQDQIADIFTKPLKIEVFQK 391

Query: 53   LRSKLGLQE 27
            LR  LG+ +
Sbjct: 392  LRMALGVMK 400


>ref|XP_014629708.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
            [Glycine max]
          Length = 387

 Score =  516 bits (1330), Expect = 0.0
 Identities = 244/370 (65%), Positives = 307/370 (82%), Gaps = 1/370 (0%)
 Frame = -2

Query: 1133 GKVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLKK-KNDEILIICLYVD 957
            GKVLKL KALYGLKQAPR+WN  IDKYFQ+NGF+ C  E+ALY+K   N ++L ICLYVD
Sbjct: 10   GKVLKLNKALYGLKQAPRAWNTFIDKYFQDNGFVHCQNEYALYVKTFNNGDVLFICLYVD 69

Query: 956  DLIFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKK 777
            DLIFTGNN  + E  K +M++EF+MTD+GLMSYYLGMEVKQT+ GIF+SQE+Y +E LKK
Sbjct: 70   DLIFTGNNPNLFEDLKESMSREFDMTDMGLMSYYLGMEVKQTENGIFVSQESYTKEVLKK 129

Query: 776  FNMSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRY 597
            FNM +CNPVNTP+E G K+S++D+ +KVD T+F+SLVGS RYLT  RPDI + V ++ R+
Sbjct: 130  FNMLDCNPVNTPMEGGLKLSKFDEGEKVDSTVFKSLVGSFRYLTNTRPDILYAVGVVCRF 189

Query: 596  LEAPTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVF 417
             EAPT  +L AAKRILRY+KGT++FGL+Y  ++N+KL GFCDSD+AGD DDRKSTT +VF
Sbjct: 190  TEAPTSPYLKAAKRILRYLKGTIDFGLFYSPSNNYKLVGFCDSDFAGDVDDRKSTTGFVF 249

Query: 416  FISNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDN 237
            F+ +  FT SSKKQ IVTLSTCEAEYV   SC   AIWLR L+EELQ  QKE T++ VDN
Sbjct: 250  FMGDCVFTWSSKKQGIVTLSTCEAEYVVATSCTCHAIWLRRLLEELQLLQKESTKIYVDN 309

Query: 236  KSAIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFK 57
            +SA +LAKNP+FHER KHIDTR+H+IREC+T K+V+L HV+T++QVADIFTK LKF++F+
Sbjct: 310  RSAQELAKNPVFHERCKHIDTRYHFIRECITKKEVELTHVETQDQVADIFTKPLKFEDFR 369

Query: 56   ELRSKLGLQE 27
             LR++LG+Q+
Sbjct: 370  RLRARLGVQK 379


>ref|XP_020240016.1| uncharacterized protein LOC109818890 [Cajanus cajan]
          Length = 386

 Score =  513 bits (1322), Expect = e-180
 Identities = 244/367 (66%), Positives = 304/367 (82%)
 Frame = -2

Query: 1130 KVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLKKKNDEILIICLYVDDL 951
            KVL+L+K LYGLKQA R+WN RIDKYF+E  FIKCPYEHALY+K +  +ILI+CLYVDDL
Sbjct: 17   KVLRLKKVLYGLKQALRAWNVRIDKYFKEANFIKCPYEHALYIKAQGKDILIVCLYVDDL 76

Query: 950  IFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKFN 771
            IFTGNN  M E FK+ M +EFEMTD+GLM+YYLG+EVKQ + GIFI+QE+YA++ LKKF 
Sbjct: 77   IFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQGNEGIFITQESYAKDLLKKFK 136

Query: 770  MSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYLE 591
            + + NPV TP+E G K+S+ ++ +KVDPTL++SLVGSLRYLTC RPDI + V ++SRY+E
Sbjct: 137  LDDANPVGTPMECGIKLSKDEEGEKVDPTLYKSLVGSLRYLTCTRPDILYAVGVVSRYME 196

Query: 590  APTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFFI 411
            APT THL  AKRILRYIKGT +FGLYY  ++++KL G+ DSDW+GD DDRKST+ +VF++
Sbjct: 197  APTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYM 256

Query: 410  SNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNKS 231
             + AFT  SKKQPIVTLSTCEAEYVA  SCV  AIWLR L++EL   Q EPT++ VDNKS
Sbjct: 257  GDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKS 316

Query: 230  AIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKEL 51
            AI LAKNP+FH+RSKHI TR+HYIREC+++K VQ+ +VKT +QVADIFTK LK + F +L
Sbjct: 317  AIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVFMKL 376

Query: 50   RSKLGLQ 30
            RS LG+Q
Sbjct: 377  RSLLGVQ 383


>gb|ACN78973.1| copia-type polyprotein [Glycine max]
 gb|ACN78980.1| copia-type polyprotein [Glycine max]
          Length = 1042

 Score =  526 bits (1355), Expect = e-176
 Identities = 249/370 (67%), Positives = 309/370 (83%), Gaps = 1/370 (0%)
 Frame = -2

Query: 1133 GKVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLKK-KNDEILIICLYVD 957
            GKVLKL KALYGLKQAPR+WN  IDKYFQ+NGF+ C  E+ALY+K   N ++L ICLYVD
Sbjct: 665  GKVLKLNKALYGLKQAPRAWNTHIDKYFQDNGFVHCQNEYALYVKTFNNGDVLFICLYVD 724

Query: 956  DLIFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKK 777
            DLIFTGNN  + E FK +M++EF+MTD+GLMSYYLGMEVKQT  GIF+SQE Y +E LKK
Sbjct: 725  DLIFTGNNPNLFEDFKESMSREFDMTDMGLMSYYLGMEVKQTQNGIFVSQERYTKEVLKK 784

Query: 776  FNMSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRY 597
            FNM +CNPVNTP+E G K+S++D+ +KVD T+F+SLVGSLRYLT  RPDI + V ++ R+
Sbjct: 785  FNMLDCNPVNTPMEGGLKLSKFDEGEKVDSTIFKSLVGSLRYLTNTRPDILYAVGVVCRF 844

Query: 596  LEAPTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVF 417
            +EAPT  HL AAKRIL Y+KGT++FGL+Y  ++N+KL GFCDSD+AGD DDRKSTT +VF
Sbjct: 845  MEAPTSPHLKAAKRILCYLKGTIDFGLFYSPSNNYKLVGFCDSDFAGDVDDRKSTTGFVF 904

Query: 416  FISNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDN 237
            F+ +  FT SSKKQ IVTLSTCEAEYVA  SC   AIWLR L+EELQ  QKE T++ VDN
Sbjct: 905  FMGDCVFTWSSKKQGIVTLSTCEAEYVAATSCTCHAIWLRRLLEELQLLQKESTKIYVDN 964

Query: 236  KSAIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFK 57
            +SA +LAKNP+FHERSKHIDTR+H+IREC+T K+V+L HVKT++QVADIFTK LKF++F+
Sbjct: 965  RSAQELAKNPVFHERSKHIDTRYHFIRECITKKEVELTHVKTQDQVADIFTKPLKFEDFR 1024

Query: 56   ELRSKLGLQE 27
             LR++LG+Q+
Sbjct: 1025 RLRARLGVQK 1034


>gb|OIT19970.1| retrovirus-related pol polyprotein from transposon tnt 1-94, partial
            [Nicotiana attenuata]
          Length = 401

 Score =  500 bits (1288), Expect = e-174
 Identities = 234/369 (63%), Positives = 303/369 (82%), Gaps = 1/369 (0%)
 Frame = -2

Query: 1130 KVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLK-KKNDEILIICLYVDD 954
            KVL+L+KAL+GLKQAPR WN  IDKYFQ+NGF +C +E+ALYLK   N +IL++CLYVDD
Sbjct: 32   KVLRLKKALFGLKQAPRVWNSCIDKYFQDNGFTRCLHEYALYLKVHTNGDILLVCLYVDD 91

Query: 953  LIFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKF 774
            LIFTGNN  + ETFK+ M++EFEMTD+GLMSYYLG+EVK  + GIFISQE+Y  E LKKF
Sbjct: 92   LIFTGNNPRLFETFKKDMSREFEMTDVGLMSYYLGLEVKHMEDGIFISQESYTNEILKKF 151

Query: 773  NMSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYL 594
            NM +CNPVN P+E G K+S++D+ +KVDPT F+SLVGSLRYLTC RPDI F V ++SR++
Sbjct: 152  NMLDCNPVNAPMESGTKLSKFDEGEKVDPTFFKSLVGSLRYLTCTRPDILFAVGVVSRFV 211

Query: 593  EAPTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFF 414
            EAPT  HL   +RILRY+KGT++FGL+Y  +++F L GFCDSD+AGD DDRKSTT +VFF
Sbjct: 212  EAPTSNHLKVTRRILRYLKGTIDFGLFYSSSNDFNLIGFCDSDYAGDIDDRKSTTGFVFF 271

Query: 413  ISNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNK 234
            + ++  + SSKKQ IVTLSTCEAEY+A  SC   AIWLR L++EL   Q E T++ +DNK
Sbjct: 272  LGDSVISWSSKKQSIVTLSTCEAEYIAATSCTCHAIWLRRLLKELNLPQIEATEICIDNK 331

Query: 233  SAIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKE 54
            SA  L KNP++H+RSKHIDTR+H+IRE +  K+V+L +VK+++QVADIFTK LKF++F+ 
Sbjct: 332  SAQALTKNPVYHDRSKHIDTRYHFIRESIAKKEVELKYVKSRDQVADIFTKPLKFEDFQR 391

Query: 53   LRSKLGLQE 27
            LRS+LG+++
Sbjct: 392  LRSRLGMKK 400


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
 gb|AAG50765.1|AC079131_10 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  524 bits (1349), Expect = e-172
 Identities = 252/373 (67%), Positives = 305/373 (81%)
 Frame = -2

Query: 1130 KVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLKKKNDEILIICLYVDDL 951
            KVL+L+KALYGLKQAPR+WN RIDKYF+E  FIKCPYEHALY+K + ++ILI CLYVDDL
Sbjct: 944  KVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDL 1003

Query: 950  IFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKFN 771
            IFTGNN  M E FK+ M +EFEMTD+GLMSYYLG+EVKQ D GIFI+QE YA+E LKKF 
Sbjct: 1004 IFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFK 1063

Query: 770  MSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYLE 591
            M + NPV TP+E G K+S+ ++ + VDPT F+SLVGSLRYLTC RPDI + V ++SRY+E
Sbjct: 1064 MDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYME 1123

Query: 590  APTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFFI 411
             PT TH  AAKRILRYIKGT+NFGL+Y  T ++KL G+ DSDW GD DDRKST+ +VF+I
Sbjct: 1124 HPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYI 1183

Query: 410  SNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNKS 231
             + AFT  SKKQPIVTLSTCEAEYVA  SCV  AIWLR L++EL   Q+EPT++ VDNKS
Sbjct: 1184 GDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKS 1243

Query: 230  AIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKEL 51
            AI LAKNP+FH+RSKHIDTR+HYIRECV+ K VQL +VKT +QVADIFTK LK ++F ++
Sbjct: 1244 AIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKM 1303

Query: 50   RSKLGLQEFQV*G 12
            RS LG+ +  + G
Sbjct: 1304 RSLLGVAKSSLRG 1316


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  522 bits (1344), Expect = e-171
 Identities = 251/373 (67%), Positives = 304/373 (81%)
 Frame = -2

Query: 1130 KVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLKKKNDEILIICLYVDDL 951
            KVL+L+KALYGLKQAPR+WN RIDKYF+E  FIKCPYEHALY+K + ++ILI CLYVDDL
Sbjct: 976  KVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDL 1035

Query: 950  IFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKFN 771
            IFTGNN  M E FK+ M +EFEMTD+GLMSYYLG+EVKQ D GIFI+QE YA+E LKKF 
Sbjct: 1036 IFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFK 1095

Query: 770  MSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYLE 591
            M + NPV TP+E G K+S+ ++ + VDPT F+SLVGSLRYLTC RPDI + V ++SRY+E
Sbjct: 1096 MDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYME 1155

Query: 590  APTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFFI 411
             PT TH  AAKRILRYIKGT+NFGL+Y  T ++KL G+ DSDW GD DDRKST+ +VF+I
Sbjct: 1156 HPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYI 1215

Query: 410  SNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNKS 231
             + AFT  SKKQPIV LSTCEAEYVA  SCV  AIWLR L++EL   Q+EPT++ VDNKS
Sbjct: 1216 GDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKS 1275

Query: 230  AIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKEL 51
            AI LAKNP+FH+RSKHIDTR+HYIRECV+ K VQL +VKT +QVADIFTK LK ++F ++
Sbjct: 1276 AIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKM 1335

Query: 50   RSKLGLQEFQV*G 12
            RS LG+ +  + G
Sbjct: 1336 RSLLGVAKSSLRG 1348


>gb|OIT04124.1| retrovirus-related pol polyprotein from transposon tnt 1-94, partial
            [Nicotiana attenuata]
          Length = 401

 Score =  491 bits (1264), Expect = e-171
 Identities = 231/369 (62%), Positives = 302/369 (81%), Gaps = 1/369 (0%)
 Frame = -2

Query: 1130 KVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLK-KKNDEILIICLYVDD 954
            KVL+L+KAL GLKQAPR+WN  IDKYFQ+NGF +C +E+ALYLK   N +IL++CLYV +
Sbjct: 32   KVLRLKKALCGLKQAPRAWNSCIDKYFQDNGFTRCLHEYALYLKVHTNGDILLVCLYVAN 91

Query: 953  LIFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKF 774
            LIFTGNN  + E FK+ M+ EFEMTD+GLMSYYLG+EVKQT+ GIFISQE+Y +E LKKF
Sbjct: 92   LIFTGNNSSLFEAFKKDMSHEFEMTDVGLMSYYLGLEVKQTEDGIFISQESYTKEILKKF 151

Query: 773  NMSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYL 594
            NM +CNPVNTP+E G K+S++D+ +K+DPT F+SLVGSLRYLTC RPDI F V ++ R++
Sbjct: 152  NMLDCNPVNTPMESGTKLSKFDEGEKMDPTFFKSLVGSLRYLTCTRPDILFAVGVVRRFM 211

Query: 593  EAPTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFF 414
            EA T THL   +RILRY+KGT++FGL+Y  +++  L GFCDSD+AGD DDRKST  +VFF
Sbjct: 212  EASTSTHLKVTRRILRYLKGTIDFGLFYSSSNDLNLMGFCDSDYAGDIDDRKSTIGFVFF 271

Query: 413  ISNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNK 234
            + ++  + SSKKQPIVTLSTCEAE++A  SC   AIWLR L++EL   Q E T++ +DNK
Sbjct: 272  LGDSIISWSSKKQPIVTLSTCEAEHIAAISCTCHAIWLRRLLKELNLPQIEATKICIDNK 331

Query: 233  SAIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKE 54
            SA  LAKNP++H+RSKHIDTR+H+IRE +  K+V+L +VK+ +QVADIFTK LKF++F+ 
Sbjct: 332  SAQALAKNPVYHDRSKHIDTRYHFIRESIAKKEVELKYVKSHDQVADIFTKPLKFEDFQR 391

Query: 53   LRSKLGLQE 27
            LRS+LG+++
Sbjct: 392  LRSRLGMKK 400


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  518 bits (1333), Expect = e-170
 Identities = 250/373 (67%), Positives = 303/373 (81%)
 Frame = -2

Query: 1130 KVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLKKKNDEILIICLYVDDL 951
            KVL+L+KALYGLKQAPR+WN RIDKYF+E  FIKCPYEHALY+K + ++ILI CLYVDDL
Sbjct: 915  KVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDL 974

Query: 950  IFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKFN 771
            IFTGNN  M E FK+ M +EFEMTD+GLMSYYLG+EVKQ D  IFI+QE YA+E LKKF 
Sbjct: 975  IFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNRIFITQEGYAKEVLKKFK 1034

Query: 770  MSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYLE 591
            M + NPV TP+E G K+S+ ++ + VDPT F+SLVGSLRYLTC RPDI + V ++SRY+E
Sbjct: 1035 MDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYME 1094

Query: 590  APTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFFI 411
             PT TH  AAKRILRYIKGT+NFGL+Y  T ++KL G+ DSDW  D DDRKST+ +VF+I
Sbjct: 1095 HPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGRDVDDRKSTSGFVFYI 1154

Query: 410  SNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNKS 231
             + AFT  SKKQPIVTLSTCEAEYVA  SCV  AIWLR L++EL   Q+EPT++ VDNKS
Sbjct: 1155 GDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKS 1214

Query: 230  AIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKEL 51
            AI LAKNP+FH+RSKHIDTR+HYIRECV+ K VQL +VKT +QVADIFTK LK ++F ++
Sbjct: 1215 AIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKM 1274

Query: 50   RSKLGLQEFQV*G 12
            RS LG+ +  + G
Sbjct: 1275 RSLLGVAKSSLRG 1287


>gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1342

 Score =  519 bits (1336), Expect = e-170
 Identities = 246/367 (67%), Positives = 306/367 (83%)
 Frame = -2

Query: 1130 KVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLKKKNDEILIICLYVDDL 951
            KVL+L+KALYGLKQAPR+WN RIDKYF+E  FIKCPYEHALY+K +  +ILI+CLYVDDL
Sbjct: 973  KVLRLKKALYGLKQAPRAWNVRIDKYFKEANFIKCPYEHALYIKAQGKDILIVCLYVDDL 1032

Query: 950  IFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKFN 771
            IFTGNN  M E FK+ M +EFEMTD+GLM+YYLG+EVKQ + GIFI+QE+YA++ LKKF 
Sbjct: 1033 IFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQGNEGIFITQESYAKDLLKKFK 1092

Query: 770  MSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYLE 591
            + + NPV TP+E G K+S+ ++ +KVDPTL++SLVGSLRYLTC RPDI + V ++SRY+E
Sbjct: 1093 LDDANPVGTPMECGIKLSKDEEGEKVDPTLYKSLVGSLRYLTCTRPDILYAVGVVSRYME 1152

Query: 590  APTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFFI 411
            APT THL  AKRILRYIKGT +FGLYY  ++++KL G+ DSDW+GD DDRKST+ +VF++
Sbjct: 1153 APTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYM 1212

Query: 410  SNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNKS 231
             + AFT  SKKQPIVTLSTCEAEYVA  SCV  AIWLR L++EL   Q EPT++ VDNKS
Sbjct: 1213 GDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKS 1272

Query: 230  AIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKEL 51
            AI LAKNP+FH+RSKHI TR+HYIREC+++K VQ+ +VKT +QVADIFTK LK + F +L
Sbjct: 1273 AIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVFMKL 1332

Query: 50   RSKLGLQ 30
            RS LG+Q
Sbjct: 1333 RSLLGVQ 1339


>gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1342

 Score =  518 bits (1335), Expect = e-170
 Identities = 246/367 (67%), Positives = 306/367 (83%)
 Frame = -2

Query: 1130 KVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLKKKNDEILIICLYVDDL 951
            KVL+L+KALYGLKQAPR+WN RIDKYF+E  FIKCPYEHALY+K +  +ILI+CLYVDDL
Sbjct: 973  KVLRLKKALYGLKQAPRAWNVRIDKYFKEVNFIKCPYEHALYIKAQGKDILIVCLYVDDL 1032

Query: 950  IFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKFN 771
            IFTGNN  M E FK+ M +EFEMTD+GLM+YYLG+EVKQ + GIFI+QE+YA++ LKKF 
Sbjct: 1033 IFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQGNEGIFITQESYAKDLLKKFK 1092

Query: 770  MSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYLE 591
            + + NPV TP+E G K+S+ ++ +KVDPTL++SLVGSLRYLTC RPDI + V ++SRY+E
Sbjct: 1093 LDDANPVGTPMECGIKLSKDEEGEKVDPTLYKSLVGSLRYLTCTRPDILYAVGVVSRYME 1152

Query: 590  APTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFFI 411
            APT THL  AKRILRYIKGT +FGLYY  ++++KL G+ DSDW+GD DDRKST+ +VF++
Sbjct: 1153 APTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYM 1212

Query: 410  SNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNKS 231
             + AFT  SKKQPIVTLSTCEAEYVA  SCV  AIWLR L++EL   Q EPT++ VDNKS
Sbjct: 1213 GDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKS 1272

Query: 230  AIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKEL 51
            AI LAKNP+FH+RSKHI TR+HYIREC+++K VQ+ +VKT +QVADIFTK LK + F +L
Sbjct: 1273 AIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVFMKL 1332

Query: 50   RSKLGLQ 30
            RS LG+Q
Sbjct: 1333 RSLLGVQ 1339


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  518 bits (1335), Expect = e-170
 Identities = 249/373 (66%), Positives = 302/373 (80%)
 Frame = -2

Query: 1130 KVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLKKKNDEILIICLYVDDL 951
            KVL+L+K LYGLKQAPR+WN RIDKYF+E  FIKCPYEHALY+K + ++ILI CLYVDDL
Sbjct: 976  KVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDL 1035

Query: 950  IFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKFN 771
            IFTGNN  + E FK+ M +EFEMTD+GLMSYYLG+EVKQ D GIFI+QE YA+E LKKF 
Sbjct: 1036 IFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFK 1095

Query: 770  MSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYLE 591
            M + NPV TP+E G K+S+ ++ + VDPT F+SLVGSLRYLTC RPDI + V ++SRY+E
Sbjct: 1096 MDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYME 1155

Query: 590  APTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFFI 411
             PT TH  AAKRILRYIKGT+NFGL+Y  T ++KL G+ DSDW GD DDRKST+ +VF+I
Sbjct: 1156 HPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYI 1215

Query: 410  SNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNKS 231
             + AFT  SKKQPIVTLSTCEAEYVA  SCV  AIWLR L++EL   Q+EPT++ VDNKS
Sbjct: 1216 GDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKS 1275

Query: 230  AIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKEL 51
            AI LAKNP+FH+RSKHIDTR+HYIRECV+ K VQL +VKT +QVAD FTK LK + F ++
Sbjct: 1276 AIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKM 1335

Query: 50   RSKLGLQEFQV*G 12
            RS LG+ +  + G
Sbjct: 1336 RSLLGVAKSSLRG 1348


>gb|OIS98682.1| retrovirus-related pol polyprotein from transposon tnt 1-94, partial
            [Nicotiana attenuata]
          Length = 400

 Score =  488 bits (1256), Expect = e-169
 Identities = 229/369 (62%), Positives = 299/369 (81%), Gaps = 1/369 (0%)
 Frame = -2

Query: 1130 KVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLK-KKNDEILIICLYVDD 954
            KVL+L+KALYGLKQAPR+WN  IDKYFQ+NGF +C +E+ALYLK   N +IL++CLYVDD
Sbjct: 32   KVLRLKKALYGLKQAPRAWNSCIDKYFQDNGFTRCLHEYALYLKVHTNGDILLVCLYVDD 91

Query: 953  LIFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKF 774
            LIFTGNN  + E FK+ M++EFEMTD+GLMSYYLG+EVKQ +  IFISQE+Y +E LKKF
Sbjct: 92   LIFTGNNSSLFEAFKKDMSREFEMTDVGLMSYYLGLEVKQMEDEIFISQESYTKEILKKF 151

Query: 773  NMSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYL 594
            NM +CNPVNTP+E G K+S++D+ +KVDPT F+SLVGSLRYL C RPDI F V ++SR++
Sbjct: 152  NMLDCNPVNTPMESGTKLSKFDEGEKVDPTFFKSLVGSLRYLICTRPDILFAVGVVSRFM 211

Query: 593  EAPTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFF 414
            EAPT THL   +RILRY+K T++FGL+Y  +++F   G+CDSD+AGD DDRKST  +VFF
Sbjct: 212  EAPTSTHLKVTRRILRYLKDTIDFGLFYYSSNDFYRMGYCDSDYAGDIDDRKSTIGFVFF 271

Query: 413  ISNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNK 234
            + ++  + SSKKQ IVTLSTCEAEYV   SC   AIWLR L++EL F Q E T++ +DNK
Sbjct: 272  LGDSVISWSSKKQSIVTLSTCEAEYVVATSCTCHAIWLRRLLKELNFPQIEATEICIDNK 331

Query: 233  SAIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKE 54
             A  LAKNP++H+RSKHIDT++H+IRE +  K+V+  +VK+ +QVAD FTK LKF++F+ 
Sbjct: 332  FAQALAKNPVYHDRSKHIDTKYHFIRESIAKKEVERKYVKSHDQVADFFTKPLKFEDFQR 391

Query: 53   LRSKLGLQE 27
            LRS+LG+++
Sbjct: 392  LRSRLGMKK 400


>gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1331

 Score =  517 bits (1332), Expect = e-169
 Identities = 245/367 (66%), Positives = 305/367 (83%)
 Frame = -2

Query: 1130 KVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLKKKNDEILIICLYVDDL 951
            KVL+L+KALYGLKQAPR+WN RIDKYF+E  FIKCPYEHALY+K +  +ILI+CLYVDDL
Sbjct: 962  KVLRLKKALYGLKQAPRAWNVRIDKYFKEANFIKCPYEHALYIKAQGKDILIVCLYVDDL 1021

Query: 950  IFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKFN 771
            IFTGNN  M E FK+ M +EFEMTD+GLM+YYLG+EVKQ + GIFI+QE+YA++ LKKF 
Sbjct: 1022 IFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQGNEGIFITQESYAKDLLKKFK 1081

Query: 770  MSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYLE 591
            + + NPV TP+E G K+S+ ++ +KVDPTL++SLVGSLRYLTC RPDI + V ++SRY+E
Sbjct: 1082 LDDANPVGTPMECGIKLSKDEEGEKVDPTLYKSLVGSLRYLTCTRPDILYAVGVVSRYME 1141

Query: 590  APTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFFI 411
            APT THL  AKRILRYIKGT +FGLYY  ++++KL G+ DSDW+GD DDRKST+ +VF++
Sbjct: 1142 APTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYM 1201

Query: 410  SNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNKS 231
             + AFT  SKKQPIVTLSTCEAEYVA  SCV  AIWLR L++EL   Q EPT++ VDNKS
Sbjct: 1202 GDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKS 1261

Query: 230  AIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKEL 51
             I LAKNP+FH+RSKHI TR+HYIREC+++K VQ+ +VKT +QVADIFTK LK + F +L
Sbjct: 1262 TIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTKPLKKEVFMKL 1321

Query: 50   RSKLGLQ 30
            RS LG+Q
Sbjct: 1322 RSLLGVQ 1328


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  517 bits (1331), Expect = e-169
 Identities = 248/373 (66%), Positives = 302/373 (80%)
 Frame = -2

Query: 1130 KVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLKKKNDEILIICLYVDDL 951
            KVL+L+K LYGLKQAPR+WN RIDKYF+E  FIKCPYEHALY+K + ++ILI CLYVDDL
Sbjct: 976  KVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDL 1035

Query: 950  IFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKFN 771
            IFTGNN  + E FK+ M +EFEMTD+GLMSYYLG+EVKQ D GIFI+QE YA+E LKKF 
Sbjct: 1036 IFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFK 1095

Query: 770  MSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYLE 591
            + + NPV TP+E G K+S+ ++ + VDPT F+SLVGSLRYLTC RPDI + V ++SRY+E
Sbjct: 1096 IDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGVVSRYME 1155

Query: 590  APTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFFI 411
             PT TH  AAKRILRYIKGT+NFGL+Y  T ++KL G+ DSDW GD DDRKST+ +VF+I
Sbjct: 1156 HPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYI 1215

Query: 410  SNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNKS 231
             + AFT  SKKQPIVTLSTCEAEYVA  SCV  AIWLR L++EL   Q+EPT++ VDNKS
Sbjct: 1216 GDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFVDNKS 1275

Query: 230  AIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKEL 51
            AI LAKNP+FH+RSKHIDTR+HYIRECV+ K VQL +VKT +QVAD FTK LK + F ++
Sbjct: 1276 AIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADFFTKPLKRENFIKM 1335

Query: 50   RSKLGLQEFQV*G 12
            RS LG+ +  + G
Sbjct: 1336 RSLLGVAKSSLRG 1348


>gb|OIT20414.1| retrovirus-related pol polyprotein from transposon tnt 1-94, partial
            [Nicotiana attenuata]
          Length = 400

 Score =  483 bits (1244), Expect = e-168
 Identities = 232/369 (62%), Positives = 296/369 (80%), Gaps = 1/369 (0%)
 Frame = -2

Query: 1130 KVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLK-KKNDEILIICLYVDD 954
            KVL+L+KALYGLKQAPR+WN  IDKYFQ+NGF +C +E+ LYLK   N++IL++CLYVDD
Sbjct: 32   KVLQLKKALYGLKQAPRAWNSCIDKYFQDNGFTRCLHEYVLYLKVHTNEDILLVCLYVDD 91

Query: 953  LIFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKF 774
            LIFTGNN  + E FK+ M++EFEMTD+GLMSYYLG+EVKQ + GIFISQE+Y +E LKKF
Sbjct: 92   LIFTGNNPSLFEAFKKDMSREFEMTDVGLMSYYLGLEVKQMEDGIFISQESYTKEILKKF 151

Query: 773  NMSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYL 594
            NM +CNP NTP+E G K+S++D+ +KVD T F+SLV SLRYLTC  PDI F V ++SR++
Sbjct: 152  NMLDCNPGNTPMENGTKLSKFDEGEKVDRTFFKSLVRSLRYLTCTWPDILFAVGVVSRFM 211

Query: 593  EAPTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFF 414
            EAPT THL   +RILRY+KGT +FGL+Y  +++F L GFCDSD  GD DDRKSTT +VFF
Sbjct: 212  EAPTSTHLKVTRRILRYLKGTTDFGLFYSSSNDFNLMGFCDSD-VGDIDDRKSTTGFVFF 270

Query: 413  ISNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNK 234
            + ++  + SSKKQ IVTLSTCEAEY+A  SC   AIWLR L++EL   Q E T + +DNK
Sbjct: 271  LGDSVISWSSKKQSIVTLSTCEAEYIAATSCTCHAIWLRRLLKELNLPQIEATDICIDNK 330

Query: 233  SAIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKE 54
            SA  LAKN ++H+RSKHIDTR+H+IREC+  K+V+L +VK  +QVADIFTK LKF +F+ 
Sbjct: 331  SAQALAKNLVYHDRSKHIDTRYHFIRECIAKKEVELKYVKFHDQVADIFTKPLKFDDFQR 390

Query: 53   LRSKLGLQE 27
            LRS LG+++
Sbjct: 391  LRSGLGMKK 399


>ref|XP_018674675.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC108951439
            [Musa acuminata subsp. malaccensis]
          Length = 442

 Score =  478 bits (1231), Expect = e-165
 Identities = 230/367 (62%), Positives = 292/367 (79%), Gaps = 1/367 (0%)
 Frame = -2

Query: 1130 KVLKLRKALYGLKQAPRSWNCRIDKYFQENGFIKCPYEHALYLKKK-NDEILIICLYVDD 954
            KV KL++ALY LKQAPR+ N RID YF +NGF KCP+EHALY K   N +IL +CLYVDD
Sbjct: 39   KVYKLKRALYRLKQAPRAXNSRIDTYFIQNGFSKCPHEHALYTKSNSNGDILFVCLYVDD 98

Query: 953  LIFTGNNMEMIETFKRAMNQEFEMTDLGLMSYYLGMEVKQTDRGIFISQENYARETLKKF 774
            LIFTGN+  MI+ FK +M +EFEMTDLGLM+Y+LG+EV Q + GIFISQENYA+E LKKF
Sbjct: 99   LIFTGNSSSMIKDFKHSMKKEFEMTDLGLMTYFLGIEVIQDNGGIFISQENYAKEVLKKF 158

Query: 773  NMSNCNPVNTPVEYGEKISRYDDTDKVDPTLFRSLVGSLRYLTCIRPDICFGVELISRYL 594
             M +C+P +TP+EYG K+++  +   ++PT F+SLVG LRYLTC RPDI FGV LISR++
Sbjct: 159  FMEDCHPTDTPIEYGTKLTKEGEGTYINPTYFKSLVGCLRYLTCTRPDILFGVGLISRFM 218

Query: 593  EAPTKTHLNAAKRILRYIKGTLNFGLYYQITDNFKLEGFCDSDWAGDADDRKSTTRYVFF 414
            E P  +HLN AKRILRYIKGT+ +G++Y  +   +L G+ DSDWAG  DDRKSTTR+VF+
Sbjct: 219  EVPKTSHLNVAKRILRYIKGTIEYGMFYSSSKKLELIGYSDSDWAGSYDDRKSTTRFVFY 278

Query: 413  ISNAAFT*SSKKQPIVTLSTCEAEYVALNSCVTQAIWLRCLMEELQFAQKEPTQVNVDNK 234
               A FT SSKKQ IV LS+CEAEY+A +S V  AIWLR L++EL   Q++ T++ VDNK
Sbjct: 279  FGKATFTWSSKKQRIVALSSCEAEYIAASSSVCHAIWLRRLLQELHMPQEKSTKIYVDNK 338

Query: 233  SAIQLAKNPLFHERSKHIDTRFHYIRECVTSKQVQLNHVKTKEQVADIFTKALKFKEFKE 54
            SAI LAKNP++HERSKHIDTRFH+IR+ + +K+V+++HVKT EQVADI TK LKF+ F++
Sbjct: 339  SAIALAKNPVYHERSKHIDTRFHFIRDHIKNKEVKIHHVKTSEQVADILTKPLKFEIFQQ 398

Query: 53   LRSKLGL 33
            LR KLG+
Sbjct: 399  LRRKLGM 405