BLASTX nr result

ID: Cheilocostus21_contig00048776 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00048776
         (959 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009407255.1| PREDICTED: uncharacterized protein LOC103989...    74   2e-15

>ref|XP_009407255.1| PREDICTED: uncharacterized protein LOC103989994 [Musa acuminata
           subsp. malaccensis]
          Length = 175

 Score = 74.3 bits (181), Expect(2) = 2e-15
 Identities = 52/147 (35%), Positives = 71/147 (48%), Gaps = 2/147 (1%)
 Frame = -1

Query: 824 FHLNTVFPRGQTSKLMMRSSRIYSSQISLKRSVPSSKSCMVNKMVCYLTLVSVIFSESQ* 645
           FH N + PR QT K M R+S IY+SQIS K SV  S    +N  V    +  +I S  + 
Sbjct: 6   FHPNAILPRDQTRKTMARASLIYNSQISPKTSVSLSNFFRINNKVYEDQVRGIICSRDE- 64

Query: 644 YLTDIS*SYNRFRFIMIK*GV*QATETKEEIVCGGYDEGPRCSHPSSSRKKERIHEIYHE 465
                                      + EI+C GYDEG R SH  SS   +RI E Y+E
Sbjct: 65  ---------------------------RGEIICEGYDEGSRHSHRLSSENGKRICEGYNE 97

Query: 464 --RHNLPAPVGIADIICKGNDENQVKG 390
             R++L +P  + + +C+  D+ QVKG
Sbjct: 98  RPRYHLRSPAQVEETVCEAYDD-QVKG 123



 Score = 37.7 bits (86), Expect(2) = 2e-15
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = -2

Query: 385 CYEDRTGNVICEGYDTGPRYSH 320
           C  D+TG +ICEG D GPRYS+
Sbjct: 126 CCRDKTGEMICEGIDEGPRYSY 147


Top