BLASTX nr result

ID: Cheilocostus21_contig00048428 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00048428
         (954 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009387829.1| PREDICTED: protein CHUP1, chloroplastic [Mus...    57   2e-08

>ref|XP_009387829.1| PREDICTED: protein CHUP1, chloroplastic [Musa acuminata subsp.
           malaccensis]
          Length = 413

 Score = 56.6 bits (135), Expect(2) = 2e-08
 Identities = 34/78 (43%), Positives = 47/78 (60%)
 Frame = -2

Query: 401 KEDDTCIALRNNKLEASIKRI*FLGGRE*TAESAVCYLNTQNTLLRAQNADRRTMFAQKV 222
           +E+DTC +L  +KLEAS++RI FL       E     L  +N LLRAQ+ADRR+   +K 
Sbjct: 4   EEEDTCQSLLRSKLEASLQRISFL-------EMENEQLRRENALLRAQDADRRSTPRKKT 56

Query: 221 QAFTGDIDSVKQMDQIKT 168
           QAF G I S ++    +T
Sbjct: 57  QAFVGSISSSQEKQMYQT 74



 Score = 31.2 bits (69), Expect(2) = 2e-08
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = -1

Query: 81  VLNPPPTPLCSSVATKISKEAKLPRP 4
           V NPPP+P  SS   K SKE  LP P
Sbjct: 105 VPNPPPSPKSSSPTAKPSKETGLPPP 130


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