BLASTX nr result

ID: Cheilocostus21_contig00048379 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00048379
         (561 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009387099.1| PREDICTED: protein BIG GRAIN 1-like [Musa ac...    56   6e-06

>ref|XP_009387099.1| PREDICTED: protein BIG GRAIN 1-like [Musa acuminata subsp.
           malaccensis]
          Length = 351

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 38/107 (35%), Positives = 46/107 (42%)
 Frame = +3

Query: 3   PCGQKIVTTGDXXXXXXXXXXXXXXXXXXXXXXXEGKGREAGRRSRVKDILRKXXXXXXX 182
           PCGQK V  GD                       EGKG+    R RV+++LR+       
Sbjct: 252 PCGQKNVYAGDRAAEGRRRTVATEV---------EGKGKTK-TRMRVEELLRRFEDGEEE 301

Query: 183 XXXXXXXXXXXXXXXXXTVMGCGGGYRDELPVYETTHPGTHRVLSRG 323
                            TVM  G GYRDELP+YETTH  T+R +SRG
Sbjct: 302 DGEISDSSSDLFELENLTVMTGGEGYRDELPMYETTHAATNRAISRG 348


Top