BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00048316
         (1000 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009381640.1| PREDICTED: probable RNA-dependent RNA polyme...   513   e-171
gb|AIO05709.1| RNA-dependent RNA polymerase 2, partial [Cocos nu...   453   e-153
ref|XP_019703492.1| PREDICTED: probable RNA-dependent RNA polyme...   454   e-148
ref|XP_008780950.1| PREDICTED: probable RNA-dependent RNA polyme...   449   e-146
gb|OAY66642.1| putative RNA-dependent RNA polymerase 2 [Ananas c...   440   e-144
ref|XP_020110295.1| probable RNA-dependent RNA polymerase 2 [Ana...   440   e-142
ref|XP_016496493.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   393   e-129
ref|XP_015581229.1| PREDICTED: RNA-dependent RNA polymerase 2 is...   399   e-128
ref|XP_011028594.1| PREDICTED: RNA-dependent RNA polymerase 2 [P...   402   e-128
gb|ABF81698.1| RNA-dependent RNA polymerase, partial [Zea mays]       383   e-128
ref|XP_002511431.1| PREDICTED: RNA-dependent RNA polymerase 2 is...   399   e-128
gb|PIN04805.1| RNA-directed RNA polymerase QDE-1 [Handroanthus i...   399   e-127
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu...   398   e-127
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2 [C...   398   e-126
ref|XP_019197287.1| PREDICTED: RNA-dependent RNA polymerase 2 [I...   398   e-126
gb|ONK69464.1| uncharacterized protein A4U43_C05F23220 [Asparagu...   395   e-126
ref|XP_007036161.2| PREDICTED: RNA-dependent RNA polymerase 2 [T...   397   e-126
ref|XP_021890849.1| RNA-dependent RNA polymerase 2 [Carica papaya]    397   e-126
dbj|GAV63008.1| RdRP domain-containing protein [Cephalotus folli...   396   e-126
gb|KQJ83039.1| hypothetical protein BRADI_5g12757v3 [Brachypodiu...   389   e-126

>ref|XP_009381640.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Musa acuminata
            subsp. malaccensis]
          Length = 1106

 Score =  513 bits (1321), Expect = e-171
 Identities = 256/334 (76%), Positives = 293/334 (87%), Gaps = 2/334 (0%)
 Frame = +3

Query: 3    ILRNLPLSSIHGELVLFKRGLSFPSSTLVPMVNCPSEHSVAYEILFQINSLVQMQKITFR 182
            ILR+LP S++  +L LFK  L  PS  LVP+VNCPS++SVA+EIL+QINSLV MQKITFR
Sbjct: 243  ILRDLPFSTVLEDLNLFKGELWSPSWMLVPIVNCPSDYSVAFEILYQINSLVHMQKITFR 302

Query: 183  QVTTDLFSILRGLPLGSALMILIKMHKLTSTCYDPVHFIKDQLSKMNNISSPSQNIAS-- 356
            QVTTDLF I +GLPL SA+ IL+KMHKLTSTCY+PV FIK+QL+K+ N  +PS N ++  
Sbjct: 303  QVTTDLFDIFKGLPLDSAIKILMKMHKLTSTCYNPVQFIKNQLAKIKNFHAPSSNKSTIA 362

Query: 357  QNLMSCYRVLVTPTKVYCLGPELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSDAISA 536
            QNLMSCYRVLVTPTKVYCLGPELETSNYVVKHFS +ASDFLRVSFVDEDWSKL SDAIS 
Sbjct: 363  QNLMSCYRVLVTPTKVYCLGPELETSNYVVKHFSTNASDFLRVSFVDEDWSKLPSDAISV 422

Query: 537  RIDRGVFSKPYRTEIYSRILSVLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRDDLNA 716
             IDR   SKP+RT IY+RILSVLKDGL IG KKFEFLAFSASQLRANS+WMFAS ++L A
Sbjct: 423  TIDRNFLSKPHRTGIYTRILSVLKDGLHIGSKKFEFLAFSASQLRANSVWMFASNENLTA 482

Query: 717  ETIRRWMGHFSGIHSVSKCAARMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKKYCFS 896
            E+IR+WMGHFSGIHSVSKCAARMGQLFSSS+QT++VP QDVKIIPD+E+  EDGKKYCFS
Sbjct: 483  ESIRKWMGHFSGIHSVSKCAARMGQLFSSSVQTLNVPRQDVKIIPDIEVTTEDGKKYCFS 542

Query: 897  DGIGKISFSFARKIAQICGLSHTPSAFQIRYGGF 998
            DGIGKIS SFA++IA+ CGL +TPSAFQIRYGG+
Sbjct: 543  DGIGKISLSFAKQIAKKCGLRNTPSAFQIRYGGY 576


>gb|AIO05709.1| RNA-dependent RNA polymerase 2, partial [Cocos nucifera]
          Length = 618

 Score =  453 bits (1166), Expect = e-153
 Identities = 230/335 (68%), Positives = 269/335 (80%), Gaps = 3/335 (0%)
 Frame = +3

Query: 3    ILRNLPLSSIHGELVLFKRGLSFPSSTLVPMVNCPSEHSVAYEILFQINSLVQMQKITFR 182
            I + +P     GEL L    L +  S LVP+++CP EHSVAYEILFQ+NSLV MQKI+  
Sbjct: 4    IQKKIPFLGELGELALSMGQLFYAPSKLVPIISCPPEHSVAYEILFQLNSLVHMQKISCG 63

Query: 183  QVTTDLFSILRGLPLGSALMILIKMHKLTSTCYDPVHFIKDQLSKMN---NISSPSQNIA 353
            QV  DLF ILRGL L + + IL KMHKL STCY+PV FIK+QL+ M    N SSP ++  
Sbjct: 64   QVNNDLFDILRGLSLDTTMKILAKMHKLKSTCYEPVQFIKNQLANMRKNRNSSSPIKSTH 123

Query: 354  SQNLMSCYRVLVTPTKVYCLGPELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSDAIS 533
            ++N+MSC+RVLVTP+KVY LGPELETSNYV+KH+S +ASDF+RVSF++EDW KLS DAIS
Sbjct: 124  AENIMSCHRVLVTPSKVYFLGPELETSNYVIKHYSEYASDFIRVSFIEEDWGKLSFDAIS 183

Query: 534  ARIDRGVFSKPYRTEIYSRILSVLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRDDLN 713
              I++GVFSKPYRT IY RILS+LKDG+ IG KKFEFLAFSASQLR+NSIWMFAS D + 
Sbjct: 184  TSIEQGVFSKPYRTGIYDRILSILKDGIVIGSKKFEFLAFSASQLRSNSIWMFASNDKVT 243

Query: 714  AETIRRWMGHFSGIHSVSKCAARMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKKYCF 893
            AE IR WMGHF+ IHSVSKCAARMGQLFSSS+QTIDVP +DVK I DV  +  DG  YCF
Sbjct: 244  AENIREWMGHFNRIHSVSKCAARMGQLFSSSLQTIDVPFRDVKNISDV-TVTTDGIPYCF 302

Query: 894  SDGIGKISFSFARKIAQICGLSHTPSAFQIRYGGF 998
            SDGIGKIS SFAR++AQ CGLSHTPSAFQIRYGG+
Sbjct: 303  SDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGY 337


>ref|XP_019703492.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Elaeis
            guineensis]
          Length = 1117

 Score =  454 bits (1167), Expect = e-148
 Identities = 229/335 (68%), Positives = 270/335 (80%), Gaps = 3/335 (0%)
 Frame = +3

Query: 3    ILRNLPLSSIHGELVLFKRGLSFPSSTLVPMVNCPSEHSVAYEILFQINSLVQMQKITFR 182
            I + LP     GEL L    L +  S LVP+++CP EHSVAYEILFQ+NSLV MQKI+  
Sbjct: 243  IQKKLPFLGELGELALLMGQLYYAPSKLVPIISCPPEHSVAYEILFQLNSLVHMQKISCG 302

Query: 183  QVTTDLFSILRGLPLGSALMILIKMHKLTSTCYDPVHFIKDQLSKMN---NISSPSQNIA 353
            QV  DLF ILRGL L + + IL KMHKL STCY+PV FIK+QL+ M    N SSP ++  
Sbjct: 303  QVNNDLFDILRGLSLDTTMKILTKMHKLKSTCYEPVQFIKNQLASMRKNRNASSPIKSTP 362

Query: 354  SQNLMSCYRVLVTPTKVYCLGPELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSDAIS 533
            ++N+MSC+RVLVTP+KVY LGPELETSNYV++H+S +ASDF+RVSFV+EDW KLS DAIS
Sbjct: 363  AENIMSCHRVLVTPSKVYFLGPELETSNYVIRHYSEYASDFIRVSFVEEDWGKLSFDAIS 422

Query: 534  ARIDRGVFSKPYRTEIYSRILSVLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRDDLN 713
              I++GVFSKPYRT IY+RILS+LKDG+ IG KKFEFL FSASQLR+NSIWMFAS D + 
Sbjct: 423  TSIEQGVFSKPYRTGIYNRILSILKDGIVIGSKKFEFLVFSASQLRSNSIWMFASNDKVT 482

Query: 714  AETIRRWMGHFSGIHSVSKCAARMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKKYCF 893
            AE+IR WMGHF+ IHSVSKCAARMGQLFSSS+QTIDVP +DVK I D+  +  DG  YCF
Sbjct: 483  AESIREWMGHFNKIHSVSKCAARMGQLFSSSLQTIDVPFRDVKKISDI-TVTTDGIPYCF 541

Query: 894  SDGIGKISFSFARKIAQICGLSHTPSAFQIRYGGF 998
            SDGIGKIS SFAR++AQ CGLSHTPSAFQIRYGG+
Sbjct: 542  SDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGY 576


>ref|XP_008780950.1| PREDICTED: probable RNA-dependent RNA polymerase 2 [Phoenix
            dactylifera]
          Length = 1117

 Score =  449 bits (1155), Expect = e-146
 Identities = 224/335 (66%), Positives = 270/335 (80%), Gaps = 3/335 (0%)
 Frame = +3

Query: 3    ILRNLPLSSIHGELVLFKRGLSFPSSTLVPMVNCPSEHSVAYEILFQINSLVQMQKITFR 182
            I + LP +   GEL L    L +  S LVP+++CP EHSVAYEILFQ+NSLV +QKI+  
Sbjct: 243  IQKKLPFAGELGELALSMGELFYAPSKLVPIISCPPEHSVAYEILFQLNSLVHVQKISCG 302

Query: 183  QVTTDLFSILRGLPLGSALMILIKMHKLTSTCYDPVHFIKDQLSKMN---NISSPSQNIA 353
            QV  DLF ILRGL L + + IL +MHKL STCY+P+ FIK+QL+ M    N SSP Q+  
Sbjct: 303  QVNNDLFDILRGLSLDTTMKILTRMHKLNSTCYEPMQFIKNQLANMRKNRNASSPIQSAH 362

Query: 354  SQNLMSCYRVLVTPTKVYCLGPELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSDAIS 533
            ++N+M C+RVLVTP+KVY  GPELETSNYVVKH+S +ASDF+RVSFV+EDW KLSSDAIS
Sbjct: 363  AENIMGCHRVLVTPSKVYFFGPELETSNYVVKHYSEYASDFIRVSFVEEDWGKLSSDAIS 422

Query: 534  ARIDRGVFSKPYRTEIYSRILSVLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRDDLN 713
              I++G+FSKPYRT IY+RILS+L+DG+ IG KKFEFLAFSASQLR+NS+WMFAS D + 
Sbjct: 423  PSIEQGLFSKPYRTGIYNRILSILRDGIVIGSKKFEFLAFSASQLRSNSVWMFASNDKVT 482

Query: 714  AETIRRWMGHFSGIHSVSKCAARMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKKYCF 893
            AE IR WMGHF+ IHS+SKCAARMGQLFSSS+QTIDVP +DV+ I D+  +  DG  YCF
Sbjct: 483  AEGIREWMGHFNKIHSISKCAARMGQLFSSSLQTIDVPFRDVRTISDI-TVTTDGIPYCF 541

Query: 894  SDGIGKISFSFARKIAQICGLSHTPSAFQIRYGGF 998
            SDGIGKIS SFAR++AQ CGLSHTPSAFQIRYGG+
Sbjct: 542  SDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGY 576


>gb|OAY66642.1| putative RNA-dependent RNA polymerase 2 [Ananas comosus]
          Length = 947

 Score =  440 bits (1131), Expect = e-144
 Identities = 215/337 (63%), Positives = 273/337 (81%), Gaps = 5/337 (1%)
 Frame = +3

Query: 3    ILRNLPLSSIHGELVLFKRGLSFPSSTLVPMVNCPSEHSVAYEILFQINSLVQMQKITFR 182
            +L++LP S   GE++L    +S  S+ LVP+V+CPS++SVAYEILFQ+NSLV  QK+  +
Sbjct: 70   VLKSLPFSGELGEVILRTGNVSTSSTKLVPLVDCPSDNSVAYEILFQLNSLVHNQKLPAK 129

Query: 183  QVTTDLFSILRGLPLGSALMILIKMHKLTSTCYDPVHFIKDQLS-----KMNNISSPSQN 347
            +V +DLF++L  LP   ++ IL+KMHKL S CY+P+ F++ Q++     +  N  S S++
Sbjct: 130  KVNSDLFNLLGELPFDISMRILLKMHKLKSICYEPMQFVRQQVANFRRNRKQNALSSSKS 189

Query: 348  IASQNLMSCYRVLVTPTKVYCLGPELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSDA 527
              S++LM CYRVL+TP+KVYCLGPE ETSNYVVKH+S +ASDF+RVSFVDEDWSKLS D 
Sbjct: 190  THSESLMKCYRVLITPSKVYCLGPEAETSNYVVKHYSAYASDFVRVSFVDEDWSKLSPDT 249

Query: 528  ISARIDRGVFSKPYRTEIYSRILSVLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRDD 707
            ISARI+RG+FSKP++T I+ RILS+L+DG  IG KKFEFLAFSASQLR+NS+WMFAS DD
Sbjct: 250  ISARIERGLFSKPFKTGIHDRILSILRDGFSIGLKKFEFLAFSASQLRSNSVWMFASNDD 309

Query: 708  LNAETIRRWMGHFSGIHSVSKCAARMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKKY 887
            + AE IR WMG F+ IHSVSKCAARMGQLFSSS+QT++VP  +VK IPD++ +  DG KY
Sbjct: 310  VTAEGIREWMGQFNQIHSVSKCAARMGQLFSSSLQTLNVPSWEVKTIPDID-VTTDGNKY 368

Query: 888  CFSDGIGKISFSFARKIAQICGLSHTPSAFQIRYGGF 998
             FSDGIGKIS SFAR++AQ CGLSHTPSAFQIRYGG+
Sbjct: 369  TFSDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGY 405


>ref|XP_020110295.1| probable RNA-dependent RNA polymerase 2 [Ananas comosus]
          Length = 1125

 Score =  440 bits (1131), Expect = e-142
 Identities = 215/337 (63%), Positives = 273/337 (81%), Gaps = 5/337 (1%)
 Frame = +3

Query: 3    ILRNLPLSSIHGELVLFKRGLSFPSSTLVPMVNCPSEHSVAYEILFQINSLVQMQKITFR 182
            +L++LP S   GE++L    +S  S+ LVP+V+CPS++SVAYEILFQ+NSLV  QK+  +
Sbjct: 244  VLKSLPFSGELGEVILRTGNVSTSSTKLVPLVDCPSDNSVAYEILFQLNSLVHNQKLPAK 303

Query: 183  QVTTDLFSILRGLPLGSALMILIKMHKLTSTCYDPVHFIKDQLS-----KMNNISSPSQN 347
            +V +DLF++L  LP   ++ IL+KMHKL S CY+P+ F++ Q++     +  N  S S++
Sbjct: 304  KVNSDLFNLLGELPFDISMRILLKMHKLKSICYEPMQFVRQQVANFRRNRKQNALSSSKS 363

Query: 348  IASQNLMSCYRVLVTPTKVYCLGPELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSDA 527
              S++LM CYRVL+TP+KVYCLGPE ETSNYVVKH+S +ASDF+RVSFVDEDWSKLS D 
Sbjct: 364  THSESLMKCYRVLITPSKVYCLGPEAETSNYVVKHYSAYASDFVRVSFVDEDWSKLSPDT 423

Query: 528  ISARIDRGVFSKPYRTEIYSRILSVLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRDD 707
            ISARI+RG+FSKP++T I+ RILS+L+DG  IG KKFEFLAFSASQLR+NS+WMFAS DD
Sbjct: 424  ISARIERGLFSKPFKTGIHDRILSILRDGFSIGLKKFEFLAFSASQLRSNSVWMFASNDD 483

Query: 708  LNAETIRRWMGHFSGIHSVSKCAARMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKKY 887
            + AE IR WMG F+ IHSVSKCAARMGQLFSSS+QT++VP  +VK IPD++ +  DG KY
Sbjct: 484  VTAEGIREWMGQFNQIHSVSKCAARMGQLFSSSLQTLNVPSWEVKTIPDID-VTTDGNKY 542

Query: 888  CFSDGIGKISFSFARKIAQICGLSHTPSAFQIRYGGF 998
             FSDGIGKIS SFAR++AQ CGLSHTPSAFQIRYGG+
Sbjct: 543  TFSDGIGKISLSFARQVAQKCGLSHTPSAFQIRYGGY 579


>ref|XP_016496493.1| PREDICTED: RNA-dependent RNA polymerase 2-like, partial [Nicotiana
            tabacum]
          Length = 683

 Score =  393 bits (1009), Expect = e-129
 Identities = 198/325 (60%), Positives = 254/325 (78%), Gaps = 5/325 (1%)
 Frame = +3

Query: 39   ELVLFKRGLSFPSSTLVPMVNCPSEHSVAYEILFQINSLVQMQKITFRQVTTDLFSILRG 218
            +LVL + G  + +S LVP+ + PS+  + YEILFQ+NSLV   KI+   V TDL  +L  
Sbjct: 260  DLVLDEVGDIYSASELVPLASFPSDLKLPYEILFQLNSLVHTHKISLGAVKTDLIEVLSK 319

Query: 219  LPLGSALMILIKMHKLTSTCYDPVHFIKDQL-----SKMNNISSPSQNIASQNLMSCYRV 383
            L L +A+MIL KMHKL S+C++PV FIK +L     +  N  SS    + +QN+MS +RV
Sbjct: 320  LELDTAMMILQKMHKLQSSCFEPVPFIKTRLHVLGKNSKNQPSSSYSRLVNQNMMSVHRV 379

Query: 384  LVTPTKVYCLGPELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSDAISARIDRGVFSK 563
            LVTP+KVYCLGPELETSNY+VK+F+ HASDFLRV+FV+EDWSKLS +AIS  +++G+F+K
Sbjct: 380  LVTPSKVYCLGPELETSNYIVKNFASHASDFLRVTFVEEDWSKLSPNAISISVEQGIFAK 439

Query: 564  PYRTEIYSRILSVLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRDDLNAETIRRWMGH 743
            PYRT+IY RILS+L+DGL IG K+F FLAFSASQLR+NS+WMFAS + + AE IR WMG+
Sbjct: 440  PYRTKIYHRILSILRDGLVIGTKRFLFLAFSASQLRSNSVWMFASNEYVKAEDIREWMGY 499

Query: 744  FSGIHSVSKCAARMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKKYCFSDGIGKISFS 923
            F+ I SVSKCAARMGQLFS+S QT++V    V+I+PD+E +  DG  YCFSDGIGKIS +
Sbjct: 500  FNKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEILPDIE-VTSDGVSYCFSDGIGKISQA 558

Query: 924  FARKIAQICGLSHTPSAFQIRYGGF 998
            FA ++AQ CGLS+TPSAFQIRYGG+
Sbjct: 559  FASQVAQKCGLSYTPSAFQIRYGGY 583


>ref|XP_015581229.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X2 [Ricinus
            communis]
          Length = 930

 Score =  399 bits (1025), Expect = e-128
 Identities = 203/338 (60%), Positives = 257/338 (76%), Gaps = 6/338 (1%)
 Frame = +3

Query: 3    ILRNLPLSSIHGELVLFKRGLSFPS-STLVPMVNCPSEHSVAYEILFQINSLVQMQKITF 179
            I ++ P  +   E V+ + G  + S S +VP+V C S+  + YEILFQ+NSLV  QKI+ 
Sbjct: 41   IFKSFPYYTEAREEVILEDGEEWGSASEIVPLVKCGSDSKLPYEILFQLNSLVHTQKISL 100

Query: 180  RQVTTDLFSILRGLPLGSALMILIKMHKLTSTCYDPVHFIKDQLSKMN-NISSP----SQ 344
              V T+L + L  L + +A MIL K+HKL  TCYDP+ FIK QL     N+  P    S+
Sbjct: 101  AAVDTNLITTLGSLTIDTATMILQKLHKLAVTCYDPLAFIKKQLHVPGRNLKRPFFSSSK 160

Query: 345  NIASQNLMSCYRVLVTPTKVYCLGPELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSD 524
            N+ + N+MSC+R L+TP+K+YCLGPELE+SNYVVK+F+ +ASDF+RV+FV+EDWSKL ++
Sbjct: 161  NLVNHNIMSCHRALITPSKIYCLGPELESSNYVVKNFASYASDFMRVTFVEEDWSKLPAN 220

Query: 525  AISARIDRGVFSKPYRTEIYSRILSVLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRD 704
            AIS  I RG+F+KP+RT IY RILS+L+DG+ IG KKFEFLAFSASQLR+NS+WMFAS D
Sbjct: 221  AISMSIQRGIFAKPFRTGIYHRILSILRDGIVIGAKKFEFLAFSASQLRSNSVWMFASND 280

Query: 705  DLNAETIRRWMGHFSGIHSVSKCAARMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKK 884
               AE IR WMG F+ IHS+SKCAARMGQLFSSS QT  V PQD++IIPD+E +  DG  
Sbjct: 281  KKKAEEIREWMGCFNKIHSISKCAARMGQLFSSSKQTFIVSPQDMEIIPDIE-VTSDGIN 339

Query: 885  YCFSDGIGKISFSFARKIAQICGLSHTPSAFQIRYGGF 998
            YCFSDGIGKIS SFAR++AQ CGL+ TPSAFQIRYGG+
Sbjct: 340  YCFSDGIGKISLSFARQVAQKCGLNRTPSAFQIRYGGY 377


>ref|XP_011028594.1| PREDICTED: RNA-dependent RNA polymerase 2 [Populus euphratica]
          Length = 1105

 Score =  402 bits (1034), Expect = e-128
 Identities = 200/331 (60%), Positives = 256/331 (77%), Gaps = 1/331 (0%)
 Frame = +3

Query: 9    RNLPLSSIHGELVLFKRGLSFPS-STLVPMVNCPSEHSVAYEILFQINSLVQMQKITFRQ 185
            RN P       ++  + G  F S S  VP++ C S+  +AYE+LFQ+NSLV  QKI+   
Sbjct: 249  RNFPYYQEFMNILDLEDGEEFRSASETVPLIRCGSD-KLAYEVLFQLNSLVHTQKISLAA 307

Query: 186  VTTDLFSILRGLPLGSALMILIKMHKLTSTCYDPVHFIKDQLSKMNNISSPSQNIASQNL 365
            V +DL  ILR L + +A +IL K+HKL  TCYDP+ F+K  L +  ++SSP +++   N+
Sbjct: 308  VDSDLMKILRNLTVNTAFIILQKLHKLKMTCYDPLSFVKQSLRE--SLSSPPKSLTENNI 365

Query: 366  MSCYRVLVTPTKVYCLGPELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSDAISARID 545
            MSC+R L+TP+K++CLGPE ETSNYVVKHF+ +ASDF+RV+FV+EDWSKL ++AIS  I 
Sbjct: 366  MSCHRALITPSKIFCLGPEYETSNYVVKHFAQYASDFIRVTFVEEDWSKLPANAISTSIQ 425

Query: 546  RGVFSKPYRTEIYSRILSVLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRDDLNAETI 725
            RG+F+KP+RT IY RILS+L+DG+ IG K+FEFLAFSASQLR+NS+WMFAS +D+ AE I
Sbjct: 426  RGIFAKPFRTGIYHRILSILRDGIVIGAKRFEFLAFSASQLRSNSVWMFASNNDVKAEDI 485

Query: 726  RRWMGHFSGIHSVSKCAARMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKKYCFSDGI 905
            R+WMG F  I SVSKCAARMGQLFSSS+QT  VP QDV+IIPD+E +  DG  YCFSDGI
Sbjct: 486  RKWMGCFDKIRSVSKCAARMGQLFSSSLQTFVVPVQDVEIIPDIE-VTTDGIDYCFSDGI 544

Query: 906  GKISFSFARKIAQICGLSHTPSAFQIRYGGF 998
            GKIS SFA+++A  CGLSHTPSAFQIRYGG+
Sbjct: 545  GKISLSFAKQVAHKCGLSHTPSAFQIRYGGY 575


>gb|ABF81698.1| RNA-dependent RNA polymerase, partial [Zea mays]
          Length = 459

 Score =  383 bits (984), Expect = e-128
 Identities = 196/335 (58%), Positives = 243/335 (72%), Gaps = 3/335 (0%)
 Frame = +3

Query: 3    ILRNLPLSSIHGELVLFKRGLSFPSSTLVPMVNCPSEHSVAYEILFQINSLVQMQKITFR 182
            IL +LP S   GEL +    +   SS +VP+V+CP+  SV YE+LF++NSLV M K+  R
Sbjct: 44   ILESLPFSGELGELAIASMDVFGSSSNVVPLVDCPNGFSVPYEVLFRLNSLVHMGKLVAR 103

Query: 183  QVTTDLFSILRGLPLGSALMILIKMHKLTSTCYDPVHFIKDQLSKMN-NISSPSQNIASQ 359
             V  DLF +L  L + +   I  KM KL STCY+P+ FI+ +   MN    + S    S 
Sbjct: 104  HVNADLFKVLEDLSIDTLRRIFEKMSKLKSTCYEPLQFIRHEAHSMNMRKKALSNKRESG 163

Query: 360  NLMSCYRVLVTPTKVYCLGPELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSDAISAR 539
             LM CYR+ +TP+K+YCLGPE E SNYVVK+ S +ASDF RV+FVDEDWSKLS +A+SAR
Sbjct: 164  KLMRCYRIHITPSKIYCLGPEEEVSNYVVKYHSEYASDFARVTFVDEDWSKLSPNALSAR 223

Query: 540  IDRGVFSKPYRTEIYSRILSVLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRDDLNAE 719
             ++G FSKP +T +Y RILS+LK+G  IGPKK+EFLAFSASQLR NS+WMFAS   L AE
Sbjct: 224  TEQGFFSKPLKTGLYHRILSILKEGFCIGPKKYEFLAFSASQLRGNSVWMFASNSSLTAE 283

Query: 720  TIRRWMGHFSGIHSVSKCAARMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKKYCFSD 899
             IRRWMGHF  I SVSKCAARMGQLFSSS QT +V   DV++IPD+E +  DG KY FSD
Sbjct: 284  NIRRWMGHFEDIRSVSKCAARMGQLFSSSRQTFEVSSYDVEVIPDIE-VTTDGTKYIFSD 342

Query: 900  GIGKISFSFARKIAQICGL--SHTPSAFQIRYGGF 998
            GIGKIS  FAR++A++ GL  +H PSAFQIRYGG+
Sbjct: 343  GIGKISTRFARQVAKLIGLDPAHPPSAFQIRYGGY 377


>ref|XP_002511431.1| PREDICTED: RNA-dependent RNA polymerase 2 isoform X1 [Ricinus
            communis]
 gb|EEF52033.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
          Length = 983

 Score =  399 bits (1025), Expect = e-128
 Identities = 203/338 (60%), Positives = 257/338 (76%), Gaps = 6/338 (1%)
 Frame = +3

Query: 3    ILRNLPLSSIHGELVLFKRGLSFPS-STLVPMVNCPSEHSVAYEILFQINSLVQMQKITF 179
            I ++ P  +   E V+ + G  + S S +VP+V C S+  + YEILFQ+NSLV  QKI+ 
Sbjct: 94   IFKSFPYYTEAREEVILEDGEEWGSASEIVPLVKCGSDSKLPYEILFQLNSLVHTQKISL 153

Query: 180  RQVTTDLFSILRGLPLGSALMILIKMHKLTSTCYDPVHFIKDQLSKMN-NISSP----SQ 344
              V T+L + L  L + +A MIL K+HKL  TCYDP+ FIK QL     N+  P    S+
Sbjct: 154  AAVDTNLITTLGSLTIDTATMILQKLHKLAVTCYDPLAFIKKQLHVPGRNLKRPFFSSSK 213

Query: 345  NIASQNLMSCYRVLVTPTKVYCLGPELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSD 524
            N+ + N+MSC+R L+TP+K+YCLGPELE+SNYVVK+F+ +ASDF+RV+FV+EDWSKL ++
Sbjct: 214  NLVNHNIMSCHRALITPSKIYCLGPELESSNYVVKNFASYASDFMRVTFVEEDWSKLPAN 273

Query: 525  AISARIDRGVFSKPYRTEIYSRILSVLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRD 704
            AIS  I RG+F+KP+RT IY RILS+L+DG+ IG KKFEFLAFSASQLR+NS+WMFAS D
Sbjct: 274  AISMSIQRGIFAKPFRTGIYHRILSILRDGIVIGAKKFEFLAFSASQLRSNSVWMFASND 333

Query: 705  DLNAETIRRWMGHFSGIHSVSKCAARMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKK 884
               AE IR WMG F+ IHS+SKCAARMGQLFSSS QT  V PQD++IIPD+E +  DG  
Sbjct: 334  KKKAEEIREWMGCFNKIHSISKCAARMGQLFSSSKQTFIVSPQDMEIIPDIE-VTSDGIN 392

Query: 885  YCFSDGIGKISFSFARKIAQICGLSHTPSAFQIRYGGF 998
            YCFSDGIGKIS SFAR++AQ CGL+ TPSAFQIRYGG+
Sbjct: 393  YCFSDGIGKISLSFARQVAQKCGLNRTPSAFQIRYGGY 430


>gb|PIN04805.1| RNA-directed RNA polymerase QDE-1 [Handroanthus impetiginosus]
          Length = 1117

 Score =  399 bits (1025), Expect = e-127
 Identities = 202/314 (64%), Positives = 249/314 (79%), Gaps = 1/314 (0%)
 Frame = +3

Query: 60   GLSFPS-STLVPMVNCPSEHSVAYEILFQINSLVQMQKITFRQVTTDLFSILRGLPLGSA 236
            GL F S S LVP+V   S+  V YE+LFQ+NSL+  QK++   V TDLF IL  L + +A
Sbjct: 270  GLKFDSTSDLVPIVANNSDFRVPYEVLFQLNSLIHTQKMSLAAVDTDLFEILSRLDIDTA 329

Query: 237  LMILIKMHKLTSTCYDPVHFIKDQLSKMNNISSPSQNIASQNLMSCYRVLVTPTKVYCLG 416
            L+IL +MHKL STCY+P  FIKD LS MN  S   +NI S N+MSC+RVLVTP K++CLG
Sbjct: 330  LLILKQMHKLQSTCYEPKSFIKD-LSSMN--SPDGKNITSPNVMSCHRVLVTPAKIFCLG 386

Query: 417  PELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSDAISARIDRGVFSKPYRTEIYSRIL 596
            PELE+SNY+VK+FS +ASDFLRV+FVDEDW +LS++A+S  I +G+F+KPYRT IY RIL
Sbjct: 387  PELESSNYIVKNFSSYASDFLRVTFVDEDWGRLSANAVSTSIKQGIFAKPYRTNIYRRIL 446

Query: 597  SVLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRDDLNAETIRRWMGHFSGIHSVSKCA 776
            SVL+DG+ IG KKF+FLAFSASQLR+NS+WMFAS D + AE IR WMG F+ I S+SKCA
Sbjct: 447  SVLRDGIVIGDKKFQFLAFSASQLRSNSVWMFASNDHVKAEDIREWMGCFNKIRSISKCA 506

Query: 777  ARMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKKYCFSDGIGKISFSFARKIAQICGL 956
            ARMGQLFSSS QT++V P+DV +IPD+E +  DG KYCFSDGIGKIS++FAR I +  GL
Sbjct: 507  ARMGQLFSSSTQTVEVQPRDVDLIPDIE-VTTDGVKYCFSDGIGKISYAFARDIVRKLGL 565

Query: 957  SHTPSAFQIRYGGF 998
             H PSAFQIRYGG+
Sbjct: 566  PHVPSAFQIRYGGY 579


>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
 gb|PNT00917.1| hypothetical protein POPTR_015G073700v3 [Populus trichocarpa]
          Length = 1110

 Score =  398 bits (1023), Expect = e-127
 Identities = 193/308 (62%), Positives = 247/308 (80%)
 Frame = +3

Query: 75   SSTLVPMVNCPSEHSVAYEILFQINSLVQMQKITFRQVTTDLFSILRGLPLGSALMILIK 254
            +S  VP++ C S+  +AYE+LFQ+NSLV  QKI+   V +DL  ILR L + +A++IL K
Sbjct: 272  ASETVPLIRCGSD-KLAYEVLFQLNSLVHTQKISLAAVDSDLIKILRNLTVNTAIIILQK 330

Query: 255  MHKLTSTCYDPVHFIKDQLSKMNNISSPSQNIASQNLMSCYRVLVTPTKVYCLGPELETS 434
            +HKL  TCYDP+ F+K  L +  ++SSP +++   N+MSC+R L+TP+K++CLGPE ETS
Sbjct: 331  LHKLKMTCYDPLSFVKQSLRE--SLSSPPKSLTENNIMSCHRALITPSKIFCLGPEYETS 388

Query: 435  NYVVKHFSIHASDFLRVSFVDEDWSKLSSDAISARIDRGVFSKPYRTEIYSRILSVLKDG 614
            NYVVKHF+ +ASDF+RV+FV+EDWSKL ++AIS  I RG+F+KP+RT IY RILS+L+DG
Sbjct: 389  NYVVKHFAQYASDFIRVTFVEEDWSKLPANAISTSIQRGIFAKPFRTGIYHRILSILRDG 448

Query: 615  LQIGPKKFEFLAFSASQLRANSIWMFASRDDLNAETIRRWMGHFSGIHSVSKCAARMGQL 794
              IG K+FEFLAFSASQLR+NS+WMFAS + + AE IR+WMG F  I SVSKCAARMGQL
Sbjct: 449  FVIGAKRFEFLAFSASQLRSNSVWMFASNNGVKAEDIRKWMGCFDKIRSVSKCAARMGQL 508

Query: 795  FSSSMQTIDVPPQDVKIIPDVEIIAEDGKKYCFSDGIGKISFSFARKIAQICGLSHTPSA 974
            FSSS+QT  VP QDV+IIPD+E +  DG  YCFSDGIGKIS SFA+++A  CGLSHTPSA
Sbjct: 509  FSSSLQTFVVPVQDVEIIPDIE-VTTDGIDYCFSDGIGKISLSFAKQVAHKCGLSHTPSA 567

Query: 975  FQIRYGGF 998
            FQIRYGG+
Sbjct: 568  FQIRYGGY 575


>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2 [Citrus sinensis]
          Length = 1131

 Score =  398 bits (1023), Expect = e-126
 Identities = 194/313 (61%), Positives = 246/313 (78%), Gaps = 5/313 (1%)
 Frame = +3

Query: 75   SSTLVPMVNCPSEHSVAYEILFQINSLVQMQKITFRQVTTDLFSILRGLPLGSALMILIK 254
            +S +VP+V C    ++++E+LFQ+NSLV  QK++      +L  IL GL + +ALM+L K
Sbjct: 285  TSEIVPLVKCRPGFNLSHEVLFQLNSLVHNQKVSLVAADAELIQILNGLSMETALMVLQK 344

Query: 255  MHKLTSTCYDPVHFIKDQLSKMNNIS-----SPSQNIASQNLMSCYRVLVTPTKVYCLGP 419
            +HKL S CYDPV F+K QL  +         S  + +   N+MSCYR LVTP K+YCLGP
Sbjct: 345  LHKLKSICYDPVSFVKTQLHVLGRNCKSIPLSSHKRLIDHNVMSCYRALVTPMKIYCLGP 404

Query: 420  ELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSDAISARIDRGVFSKPYRTEIYSRILS 599
            ELETSNYVVK+F+ +ASDF+RV+FV+EDWSKL ++A+S  I RG+F+KPYRT+IYSRIL+
Sbjct: 405  ELETSNYVVKNFAKYASDFMRVTFVEEDWSKLPANALSTSIQRGIFAKPYRTKIYSRILT 464

Query: 600  VLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRDDLNAETIRRWMGHFSGIHSVSKCAA 779
            +L+DG+ IG K +EFLAFSASQLR NS+WMFAS D+++AE +R WMG F+ IHSVSKCAA
Sbjct: 465  ILQDGIVIGDKHYEFLAFSASQLRNNSVWMFASNDEVSAEDVREWMGCFNKIHSVSKCAA 524

Query: 780  RMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKKYCFSDGIGKISFSFARKIAQICGLS 959
            RMGQLFSSS QT+ VP QDV++IPDVE +  DG  YCFSDGIGKIS SFAR++AQ CGLS
Sbjct: 525  RMGQLFSSSKQTLVVPVQDVEMIPDVE-VTSDGNTYCFSDGIGKISLSFARQVAQKCGLS 583

Query: 960  HTPSAFQIRYGGF 998
            HTPSAFQIRYGG+
Sbjct: 584  HTPSAFQIRYGGY 596


>ref|XP_019197287.1| PREDICTED: RNA-dependent RNA polymerase 2 [Ipomoea nil]
          Length = 1120

 Score =  398 bits (1022), Expect = e-126
 Identities = 201/338 (59%), Positives = 259/338 (76%), Gaps = 6/338 (1%)
 Frame = +3

Query: 3    ILRNLPLSSIHGELVLFKRGLSFPS-STLVPMVNCPSEHSVAYEILFQINSLVQMQKITF 179
            IL NLP  +     +  ++G  F S S LVP+V CPS+ ++AYEILFQ+NSLV  QKI+ 
Sbjct: 249  ILSNLPYYNEETVDLFLEKGEEFSSESALVPLVKCPSDSTLAYEILFQLNSLVHTQKISL 308

Query: 180  RQVTTDLFSILRGLPLGSALMILIKMHKLTSTCYDPVHFIKDQLSKMN----NIS-SPSQ 344
              V TDL   L G+   +A+ +L  MHK+ STCY P  +IK+QL  ++    NI  S  +
Sbjct: 309  AAVDTDLIEFLSGVHFDTAMAVLQSMHKMQSTCYKPKSYIKNQLDDLDRNCKNIPLSTYK 368

Query: 345  NIASQNLMSCYRVLVTPTKVYCLGPELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSD 524
               S N+MS +R  VTP+K+YCLGPELETSNY+VK+F+ +ASDFLRV+FV+EDW KLS +
Sbjct: 369  KGGSHNMMSVHRAYVTPSKIYCLGPELETSNYIVKNFAPYASDFLRVTFVEEDWGKLSPN 428

Query: 525  AISARIDRGVFSKPYRTEIYSRILSVLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRD 704
            A+S  I +G+F+KPYRT+IYSRILSVL+DG+ IG K F FLAFSASQLR+NS+WMFAS +
Sbjct: 429  AVSTNISQGIFAKPYRTDIYSRILSVLRDGVTIGAKHFVFLAFSASQLRSNSVWMFASNE 488

Query: 705  DLNAETIRRWMGHFSGIHSVSKCAARMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKK 884
             + AE IR WMG F+ I +VSKCAARMGQLFS+S+QT++V PQDV++IPD+E +  DG K
Sbjct: 489  HVKAEDIREWMGCFNKIRNVSKCAARMGQLFSTSLQTMEVQPQDVEVIPDIE-MTSDGVK 547

Query: 885  YCFSDGIGKISFSFARKIAQICGLSHTPSAFQIRYGGF 998
            YCFSDGIGKIS +F+R++AQ CGL+HTPSAFQIRYGG+
Sbjct: 548  YCFSDGIGKISQAFSRQVAQKCGLTHTPSAFQIRYGGY 585


>gb|ONK69464.1| uncharacterized protein A4U43_C05F23220 [Asparagus officinalis]
          Length = 999

 Score =  395 bits (1014), Expect = e-126
 Identities = 203/333 (60%), Positives = 255/333 (76%), Gaps = 1/333 (0%)
 Frame = +3

Query: 3    ILRNLPLSSIHGELVLFKRGLSFPSSTLVPMVNCPSEHSVAYEILFQINSLVQMQKITFR 182
            I+++LP     G L+L    +   SS LVP++NCP + +V+YE+LFQ+NSLV +QKI+  
Sbjct: 130  IIKSLPFFGELGNLMLMPGEVFCSSSKLVPILNCPGDCTVSYEVLFQLNSLVHLQKISSA 189

Query: 183  QVTTDLFSILRGLPLGSALMILIKMHKLTSTCYDPVHFIKDQLSKMNNISS-PSQNIASQ 359
             V ++LFS+L  L   +A+ IL+ MHKL STC+ P++FI++ LS+     S  S     +
Sbjct: 190  HVNSNLFSVLSQLSSDTAIKILMMMHKLNSTCHKPIYFIQNHLSRFGKQQSLSSDGNRQE 249

Query: 360  NLMSCYRVLVTPTKVYCLGPELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSDAISAR 539
             LMSC RVL+TP+KVY LGPELETSNYVVKHFS +ASDFLRV+FVDED  KL S AIS R
Sbjct: 250  KLMSCRRVLITPSKVYFLGPELETSNYVVKHFSAYASDFLRVTFVDEDRCKLPSQAISTR 309

Query: 540  IDRGVFSKPYRTEIYSRILSVLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRDDLNAE 719
            I + +FSKPYRT IY+RILSVL+DG+ IG KKFEFLAFSASQLR +SIWMFAS D + A 
Sbjct: 310  IGKDIFSKPYRTGIYNRILSVLRDGISIGSKKFEFLAFSASQLRDSSIWMFASNDFVTAS 369

Query: 720  TIRRWMGHFSGIHSVSKCAARMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKKYCFSD 899
            +IR WMG F+ I+SVSKCAARMGQLFSSS  T +VP ++VK+IPD+E    DG KYCFSD
Sbjct: 370  SIREWMGQFNEIYSVSKCAARMGQLFSSSTPTFNVPSREVKVIPDIE-TNTDGVKYCFSD 428

Query: 900  GIGKISFSFARKIAQICGLSHTPSAFQIRYGGF 998
            GIGKIS  FA+++A+  GLS+TPSAFQIRYGG+
Sbjct: 429  GIGKISVPFAKQVAKKLGLSNTPSAFQIRYGGY 461


>ref|XP_007036161.2| PREDICTED: RNA-dependent RNA polymerase 2 [Theobroma cacao]
          Length = 1149

 Score =  397 bits (1021), Expect = e-126
 Identities = 204/321 (63%), Positives = 250/321 (77%), Gaps = 6/321 (1%)
 Frame = +3

Query: 54   KRGLSFPSST-LVPMVNCPSEHSVAYEILFQINSLVQMQKITFRQVTTDLFSILRGLPLG 230
            K G  F S+  +VP+V  PS+  +AYEILFQ+NSLV  QKI+   V TDL  ILR LP+ 
Sbjct: 269  KGGGEFSSAPEIVPLVKGPSDSKLAYEILFQLNSLVHTQKISIASVDTDLIDILRVLPVE 328

Query: 231  SALMILIKMHKLTSTCYDPVHFIKDQL--SKMNNISSPSQN---IASQNLMSCYRVLVTP 395
            +A+MIL K HKL STCY+PV F+K+ L  S+ N  S P  +   +   N+MSC+R LVTP
Sbjct: 329  TAVMILQKFHKLLSTCYNPVSFVKENLPVSERNFQSRPLSSFKRLIDHNVMSCHRALVTP 388

Query: 396  TKVYCLGPELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSDAISARIDRGVFSKPYRT 575
            +K+YCLGPELETSNYVVK+F+ +ASDF+RVSFV+EDW KLS++AIS  +  G+FSKP+RT
Sbjct: 389  SKIYCLGPELETSNYVVKNFAEYASDFMRVSFVEEDWGKLSANAISTSVQLGIFSKPFRT 448

Query: 576  EIYSRILSVLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRDDLNAETIRRWMGHFSGI 755
            +IY RILSVL+ G+ IG K+FEFLAFSASQLR+NS+WMFAS D + AE +R WMG F  I
Sbjct: 449  KIYHRILSVLQHGIVIGDKRFEFLAFSASQLRSNSVWMFASNDKVTAEDVREWMGCFKKI 508

Query: 756  HSVSKCAARMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKKYCFSDGIGKISFSFARK 935
             SVSKCAARMGQLFSSS+ T+ VP QDVKIIPD+E +  DG  YCFSDGIGKIS  FAR+
Sbjct: 509  RSVSKCAARMGQLFSSSLPTLVVPVQDVKIIPDIE-VTSDGINYCFSDGIGKISLPFARE 567

Query: 936  IAQICGLSHTPSAFQIRYGGF 998
            +AQ CGL+ TPSAFQIRYGG+
Sbjct: 568  VAQKCGLNDTPSAFQIRYGGY 588


>ref|XP_021890849.1| RNA-dependent RNA polymerase 2 [Carica papaya]
          Length = 1118

 Score =  397 bits (1019), Expect = e-126
 Identities = 201/310 (64%), Positives = 245/310 (79%), Gaps = 5/310 (1%)
 Frame = +3

Query: 84   LVPMVNCPSEHSVAYEILFQINSLVQMQKITFRQVTTDLFSILRGLPLGSALMILIKMHK 263
            LVP+VNC +   ++YEILFQ+NSLV  QK++     TDL  IL  L + +AL IL K+HK
Sbjct: 275  LVPLVNCIAASKLSYEILFQLNSLVHSQKLSLVVADTDLIEILSCLTIDNALTILQKLHK 334

Query: 264  LTSTCYDPVHFIKDQLSKMNN---ISSPSQN--IASQNLMSCYRVLVTPTKVYCLGPELE 428
            L STC+DPV F+K QL  +     IS  S N  +   N+MSCYR LVTP+K+YCLGPELE
Sbjct: 335  LDSTCFDPVAFVKSQLHAVGRNCKISPLSLNKRLIDHNVMSCYRALVTPSKIYCLGPELE 394

Query: 429  TSNYVVKHFSIHASDFLRVSFVDEDWSKLSSDAISARIDRGVFSKPYRTEIYSRILSVLK 608
            TSNYVVK+F+ +ASDF+RV+FV+EDWSKL ++AIS  + +G+F+K +RT IY RILS+LK
Sbjct: 395  TSNYVVKNFAAYASDFMRVTFVEEDWSKLPANAISTTVKKGIFAKAFRTRIYHRILSILK 454

Query: 609  DGLQIGPKKFEFLAFSASQLRANSIWMFASRDDLNAETIRRWMGHFSGIHSVSKCAARMG 788
            +G+ IG KKFEFLAFSASQLR+NS+WMFAS + L AE IR+WMG F+ I SVSKCAARMG
Sbjct: 455  NGIVIGAKKFEFLAFSASQLRSNSVWMFASNEKLRAEDIRQWMGVFNNIRSVSKCAARMG 514

Query: 789  QLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKKYCFSDGIGKISFSFARKIAQICGLSHTP 968
            QLFSSS QT +VP QDV+I+PDVE +   G KYCFSDGIGKIS SFAR++AQ CGLSHTP
Sbjct: 515  QLFSSSRQTCNVPLQDVEIMPDVE-VTSGGIKYCFSDGIGKISISFARQVAQKCGLSHTP 573

Query: 969  SAFQIRYGGF 998
            SAFQIRYGGF
Sbjct: 574  SAFQIRYGGF 583


>dbj|GAV63008.1| RdRP domain-containing protein [Cephalotus follicularis]
          Length = 1120

 Score =  396 bits (1017), Expect = e-126
 Identities = 198/319 (62%), Positives = 245/319 (76%), Gaps = 6/319 (1%)
 Frame = +3

Query: 60   GLSFPS-STLVPMVNCPSEHSVAYEILFQINSLVQMQKITFRQVTTDLFSILRGLPLGSA 236
            G+ F S S +VP+V C  +  +A+EILFQ+NSLV  QKI+      DL  I   L +G+A
Sbjct: 265  GVKFCSASEIVPLVKCELDPKLAFEILFQLNSLVHTQKISLAGAGADLIKIFSSLDIGTA 324

Query: 237  LMILIKMHKLTSTCYDPVHFIKDQLSKMNNIS-----SPSQNIASQNLMSCYRVLVTPTK 401
             +IL  +HK+ S CYDP+ F+K QL  +         S  Q +A  N+MSC+R LVTP+K
Sbjct: 325  NIILQNLHKMKSICYDPMSFVKCQLHDLKRSCKHPPLSSQQRLADHNVMSCHRALVTPSK 384

Query: 402  VYCLGPELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSDAISARIDRGVFSKPYRTEI 581
            +YCLGPELETSNYVVKHF+ +ASDF+RV+FV+EDWSKL ++AI   I RG FSKP+RTEI
Sbjct: 385  IYCLGPELETSNYVVKHFAEYASDFIRVTFVEEDWSKLPANAICTSIQRGTFSKPFRTEI 444

Query: 582  YSRILSVLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRDDLNAETIRRWMGHFSGIHS 761
            Y RILSVL++G+ IGPK++EFLAFSASQLR+NS+WMFAS D + AE IR WMG F+ I S
Sbjct: 445  YHRILSVLRNGIVIGPKRYEFLAFSASQLRSNSVWMFASNDKVKAEEIREWMGCFNNIRS 504

Query: 762  VSKCAARMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKKYCFSDGIGKISFSFARKIA 941
            V+KCAARMGQLFSSS QT+ VP QDV+IIPD+E +  DG  YCFSDGIGKIS SFAR++A
Sbjct: 505  VAKCAARMGQLFSSSKQTMVVPVQDVEIIPDIE-VTSDGFDYCFSDGIGKISLSFARQVA 563

Query: 942  QICGLSHTPSAFQIRYGGF 998
            + CGLSHTPSAFQIRYGG+
Sbjct: 564  EKCGLSHTPSAFQIRYGGY 582


>gb|KQJ83039.1| hypothetical protein BRADI_5g12757v3 [Brachypodium distachyon]
          Length = 852

 Score =  389 bits (1000), Expect = e-126
 Identities = 199/334 (59%), Positives = 246/334 (73%), Gaps = 2/334 (0%)
 Frame = +3

Query: 3    ILRNLPLSSIHGELVLFKRGLSFPSSTLVPMVNCPSEHSVAYEILFQINSLVQMQKITFR 182
            IL  LP S + GEL +    +  PSS  VP+V+CP   SV+YE+LF++NSLV M KI  +
Sbjct: 4    ILNTLPFSGVLGELAISSMDVVGPSSKAVPLVDCPHGCSVSYEVLFRLNSLVHMGKIVAK 63

Query: 183  QVTTDLFSILRGLPLGSALMILIKMHKLTSTCYDPVHFIKDQLSKMNNISSPSQNIASQN 362
             V   LF+ L  +PL  +  I  KM KL STCY+P+ FI+ +L   +N    S+      
Sbjct: 64   HVNAKLFAFLEQVPLHISRRIFEKMSKLESTCYEPLQFIESELKLTHNALLSSKREGEGK 123

Query: 363  LMSCYRVLVTPTKVYCLGPELETSNYVVKHFSIHASDFLRVSFVDEDWSKLSSDAISARI 542
            LM CYR+ +TP+K+YCLGPE E SNYVVKH S +ASDF+RV+FVDEDWSKLS +AISARI
Sbjct: 124  LMRCYRIHITPSKIYCLGPEEEASNYVVKHHSEYASDFVRVTFVDEDWSKLSVNAISARI 183

Query: 543  DRGVFSKPYRTEIYSRILSVLKDGLQIGPKKFEFLAFSASQLRANSIWMFASRDDLNAET 722
            ++G FS+P++T +Y RILS+LK+G  IGPKKFEFLAFSASQLR  S+WMFAS D LNAE+
Sbjct: 184  EQGFFSQPFKTGLYYRILSILKEGFIIGPKKFEFLAFSASQLREGSVWMFASNDSLNAES 243

Query: 723  IRRWMGHFSGIHSVSKCAARMGQLFSSSMQTIDVPPQDVKIIPDVEIIAEDGKKYCFSDG 902
            IRRWMGHF  I SVSKCAARMGQLFSSS QT++V P DV+ IPD+E +  +  KY FSDG
Sbjct: 244  IRRWMGHFEEIRSVSKCAARMGQLFSSSRQTVEVRPWDVEEIPDIE-VTTNNTKYIFSDG 302

Query: 903  IGKISFSFARKIAQICGLSHT--PSAFQIRYGGF 998
            IGK+S  FAR+IA   GL HT  PSAFQIR+GG+
Sbjct: 303  IGKMSVRFAREIAYRIGLDHTNPPSAFQIRFGGY 336