BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00048162
         (1097 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar...   217   3e-59
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar...   217   3e-59
gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subc...   214   4e-58
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...   208   1e-57
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   208   3e-56
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]        198   1e-52
dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]            197   2e-52
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   197   3e-52
emb|CAJ86192.1| H0306F03.15 [Oryza sativa]                            196   3e-52
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]         196   3e-52
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]                        196   3e-52
emb|CAJ86151.1| H0413E07.4 [Oryza sativa]                             196   4e-52
dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]            194   5e-52
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]     196   6e-52
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...   196   6e-52
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]     195   1e-51
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   193   7e-51
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   192   9e-51
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   192   1e-50
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa]                        191   4e-50

>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
          Length = 1841

 Score =  217 bits (553), Expect = 3e-59
 Identities = 125/268 (46%), Positives = 166/268 (61%), Gaps = 7/268 (2%)
 Frame = +3

Query: 207  FSTYTPVSSGVVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIILD 386
            FSTY    SG VL+GND++C ++GI +V++KM+DGI+RTLT V+H+P M KNLI L  LD
Sbjct: 826  FSTYEK-HSGSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLD 884

Query: 387  FVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYRFSS-------SFFFHVKHNY 545
              G+ +     +LKV  GAL V R    G L    LY    SS       S    +  + 
Sbjct: 885  KKGFRYSAEGGVLKVFSGALTVIR----GNL-ERGLYFLDGSSVTGVAGVSSSDDLDSDT 939

Query: 546  HQIMTYEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKRVSFNIELHKFKSIL 725
             ++    +G         +   GLLS Q T KL+ CE+ +  KQ RV F+  +HK K  +
Sbjct: 940  TKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGTV 999

Query: 726  DYIHSNL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFVNFKQ*KALVEKQTE 905
            DY HS+L GP+ T+SKG   Y+LTFIDD  R VW+YFLK+K ++ +NFKQ KAL+E QT 
Sbjct: 1000 DYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQFKALIENQTG 1059

Query: 906  KKVKCLRTDNGLEFYDGDFNKF*KDEGI 989
            KK+K  RTDNGLEF  G+FN+F K+EGI
Sbjct: 1060 KKIKRFRTDNGLEFCSGEFNEFCKNEGI 1087


>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
          Length = 2351

 Score =  217 bits (553), Expect = 3e-59
 Identities = 125/268 (46%), Positives = 166/268 (61%), Gaps = 7/268 (2%)
 Frame = +3

Query: 207  FSTYTPVSSGVVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIILD 386
            FSTY    SG VL+GND++C ++GI +V++KM+DGI+RTLT V+H+P M KNLI L  LD
Sbjct: 805  FSTYEK-HSGSVLMGNDHACQVMGIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLD 863

Query: 387  FVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYRFSS-------SFFFHVKHNY 545
              G+ +     +LKV  GAL V R    G L    LY    SS       S    +  + 
Sbjct: 864  KKGFRYSAEGGVLKVFSGALTVIR----GNL-ERGLYFLDGSSVTGVAGVSSSDDLDSDT 918

Query: 546  HQIMTYEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKRVSFNIELHKFKSIL 725
             ++    +G         +   GLLS Q T KL+ CE+ +  KQ RV F+  +HK K  +
Sbjct: 919  TKLWHMRLGHMSERGLSVLSKRGLLSGQCTGKLNFCEHCVFGKQTRVKFSTGIHKTKGTV 978

Query: 726  DYIHSNL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFVNFKQ*KALVEKQTE 905
            DY HS+L GP+ T+SKG   Y+LTFIDD  R VW+YFLK+K ++ +NFKQ KAL+E QT 
Sbjct: 979  DYFHSDLWGPSPTISKGGYRYLLTFIDDYSRKVWVYFLKSKYEVLINFKQFKALIENQTG 1038

Query: 906  KKVKCLRTDNGLEFYDGDFNKF*KDEGI 989
            KK+K  RTDNGLEF  G+FN+F K+EGI
Sbjct: 1039 KKIKRFRTDNGLEFCSGEFNEFCKNEGI 1066


>gb|ABA91380.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1138

 Score =  214 bits (544), Expect = 4e-58
 Identities = 125/329 (37%), Positives = 174/329 (52%), Gaps = 34/329 (10%)
 Frame = +3

Query: 207  FSTYTPVSSGVVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIILD 386
            F+TY  V  G VL+G+D  C + GI  V++KM+DG IRTL+ V+H PN+ ++LI L  LD
Sbjct: 259  FATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCIRTLSDVRHFPNLKRSLISLRTLD 318

Query: 387  FVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYRFSSSFFFHVKHNYHQIMTYE 566
              GY + G   ILK++           +G + V         ++  +H++  +      E
Sbjct: 319  RKGYKYSGGDGILKLI-----------LGNVAVVSDSLSNSDATNLWHMRLGHMS----E 363

Query: 567  IGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKRVSFNIELHKFKSILDYIHSNL 746
            IG+ +      +   GLL  Q   KL  CE+ +  K KRV FN   H  +  LDY+HS+L
Sbjct: 364  IGLAE------LSKRGLLYGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGTLDYVHSDL 417

Query: 747  *GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFVNFKQ*KALVEKQTEKKVKCLR 926
             GP    S G ACYM+T +DD  R VW YFLK+K   F  FK+ K +VE+Q E+KVK LR
Sbjct: 418  WGPARKTSFGGACYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQIERKVKILR 477

Query: 927  TDNGLEFYDGDFNKF*KDEGI----------------------------------CPIYI 1004
            TDNG+EF    F  + K +GI                                  C  Y 
Sbjct: 478  TDNGMEFCSKIFKSYCKSKGIVRHYTVPHTPQQNCVAERMNMTIISKARYLRVFGCTAYA 537

Query: 1005 HVNDGKLESKSRKGIFIGYPTGVKGFKIW 1091
            HV++GKLE ++ K IF+GYP+GVKG+K+W
Sbjct: 538  HVDNGKLEPRAIKCIFLGYPSGVKGYKLW 566


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 690

 Score =  208 bits (529), Expect = 1e-57
 Identities = 113/263 (42%), Positives = 164/263 (62%), Gaps = 1/263 (0%)
 Frame = +3

Query: 204  LFSTYTPVSSGVVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIIL 383
            LF+T  PV SGVVL+GND  C I GI ++++K +DG I+TL+ V+ +P++ +NLI L  L
Sbjct: 303  LFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTL 362

Query: 384  DFVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYRFSSSFFFHVKH-NYHQIMT 560
            + +G  +     +LKV KGA+V+ +A ++G L + +      S++    +   +  ++  
Sbjct: 363  ESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWH 422

Query: 561  YEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKRVSFNIELHKFKSILDYIHS 740
              +G    +    +   GLL  Q   KL+ CE+ +  KQKRVSF+   H+ K  LDYIHS
Sbjct: 423  MRLGHMSEKGMHLLSKQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTATHRTKGTLDYIHS 482

Query: 741  NL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFVNFKQ*KALVEKQTEKKVKC 920
            +L GP+   S G   YM+T IDD  R VW+YFL++K++ F  FK+ K LVE QT KKVK 
Sbjct: 483  DLWGPSKVPSYGGCRYMMTIIDDFSRKVWVYFLRHKNETFPTFKKWKTLVETQTGKKVKK 542

Query: 921  LRTDNGLEFYDGDFNKF*KDEGI 989
            LRTDNGLEF +GDFN+F  + GI
Sbjct: 543  LRTDNGLEFCEGDFNEFCANHGI 565


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1032

 Score =  208 bits (529), Expect = 3e-56
 Identities = 113/263 (42%), Positives = 164/263 (62%), Gaps = 1/263 (0%)
 Frame = +3

Query: 204 LFSTYTPVSSGVVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIIL 383
           LF+T  PV SGVVL+GND  C I GI ++++K +DG I+TL+ V+ +P++ +NLI L  L
Sbjct: 7   LFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTL 66

Query: 384 DFVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYRFSSSFFFHVKH-NYHQIMT 560
           + +G  +     +LKV KGA+V+ +A ++G L + +      S++    +   +  ++  
Sbjct: 67  ESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKDATKLWH 126

Query: 561 YEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKRVSFNIELHKFKSILDYIHS 740
             +G    +    +   GLL  Q   KL+ CE+ +  KQKRVSF+   H+ K  LDYIHS
Sbjct: 127 MRLGHMSEKGMHLLSKQGLLGNQGIGKLEFCEHCVFGKQKRVSFSTATHRTKGTLDYIHS 186

Query: 741 NL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFVNFKQ*KALVEKQTEKKVKC 920
           +L GP+   S G   YM+T IDD  R VW+YFL++K++ F  FK+ K LVE QT KKVK 
Sbjct: 187 DLWGPSKVPSYGGCRYMMTIIDDFSRKVWVYFLRHKNETFPTFKKWKTLVETQTGKKVKK 246

Query: 921 LRTDNGLEFYDGDFNKF*KDEGI 989
           LRTDNGLEF +GDFN+F  + GI
Sbjct: 247 LRTDNGLEFCEGDFNEFCANHGI 269


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score =  198 bits (503), Expect = 1e-52
 Identities = 120/279 (43%), Positives = 160/279 (57%), Gaps = 14/279 (5%)
 Frame = +3

Query: 207  FSTYTPVSSGVVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIILD 386
            F+TY  V  G VL+G+D  C + GI +V++KM+DG IRTL+ V+H+PN+ ++LI L  LD
Sbjct: 317  FATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376

Query: 387  FVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYR--------------FSSSFF 524
              GY + G   ILKV KG+LVV +A     +  A LY  +               S+S  
Sbjct: 377  RKGYKYSGGDGILKVTKGSLVVMKA----SIKSANLYHLQGTTILGNVATVSDSLSNSDA 432

Query: 525  FHVKHNYHQIMTYEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKRVSFNIEL 704
             ++ H     M+ EIG+ +      +   GLL  Q  SKL  CE+ +  K KRV FN   
Sbjct: 433  TNLWHMRLGHMS-EIGLAE------LSKRGLLDGQSISKLKFCEHCIFGKHKRVKFNTST 485

Query: 705  HKFKSILDYIHSNL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFVNFKQ*KA 884
            H  + ILDY+HS+L GP    S G A YM+T +DD  R VW YFLK+K   F  FK+ K 
Sbjct: 486  HTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFNVFKEWKT 545

Query: 885  LVEKQTEKKVKCLRTDNGLEFYDGDFNKF*KDEGICPIY 1001
            +VE+QTE+KVK LRTDNG+EF    F  + K EGI   Y
Sbjct: 546  MVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHY 584


>dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
          Length = 1601

 Score =  197 bits (501), Expect = 2e-52
 Identities = 120/279 (43%), Positives = 158/279 (56%), Gaps = 14/279 (5%)
 Frame = +3

Query: 207  FSTYTPVSSGVVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIILD 386
            F+TY  V  G VL+G+D  C + GI +V++KM+DG IRTL+ V+H+PN+ ++LI L  LD
Sbjct: 317  FATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 376

Query: 387  FVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYR--------------FSSSFF 524
              GY + G   ILKV KG+LVV +A     +  A LY  R               S+S  
Sbjct: 377  RKGYKYSGGDGILKVTKGSLVVMKA----DIKSANLYHLRGTTILGNVAAVSDSLSNSDA 432

Query: 525  FHVKHNYHQIMTYEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKRVSFNIEL 704
             ++ H     MT EIG+ +      +   GLL  Q   KL  CE+ +  K KRV FN   
Sbjct: 433  TNLWHMRLGHMT-EIGLAE------LSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTST 485

Query: 705  HKFKSILDYIHSNL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFVNFKQ*KA 884
            H  + ILDY+HS+L GP    S G   YM+T +DD  R VW YFLK+K   F  FK+ K 
Sbjct: 486  HTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKT 545

Query: 885  LVEKQTEKKVKCLRTDNGLEFYDGDFNKF*KDEGICPIY 1001
            +VE+QTE+KVK LRTDNG+EF    F  + K EGI   Y
Sbjct: 546  MVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHY 584


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  197 bits (501), Expect = 3e-52
 Identities = 120/279 (43%), Positives = 158/279 (56%), Gaps = 14/279 (5%)
 Frame = +3

Query: 207  FSTYTPVSSGVVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIILD 386
            F+TY  V  G VL+G+D  C + GI +V++KM+DG IRTL+ V+H+PN+ ++LI L  LD
Sbjct: 524  FATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 583

Query: 387  FVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYR--------------FSSSFF 524
              GY + G   ILKV KG+LVV +A     +  A LY  R               S+S  
Sbjct: 584  RKGYKYSGGDGILKVTKGSLVVMKA----DIKSANLYHLRGTTILGNVAAVSDSLSNSDA 639

Query: 525  FHVKHNYHQIMTYEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKRVSFNIEL 704
             ++ H     MT EIG+ +      +   GLL  Q   KL  CE+ +  K KRV FN   
Sbjct: 640  TNLWHMRLGHMT-EIGLAE------LSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTST 692

Query: 705  HKFKSILDYIHSNL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFVNFKQ*KA 884
            H  + ILDY+HS+L GP    S G   YM+T +DD  R VW YFLK+K   F  FK+ K 
Sbjct: 693  HTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKT 752

Query: 885  LVEKQTEKKVKCLRTDNGLEFYDGDFNKF*KDEGICPIY 1001
            +VE+QTE+KVK LRTDNG+EF    F  + K EGI   Y
Sbjct: 753  MVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHY 791


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa]
          Length = 1037

 Score =  196 bits (499), Expect = 3e-52
 Identities = 119/279 (42%), Positives = 159/279 (56%), Gaps = 14/279 (5%)
 Frame = +3

Query: 207  FSTYTPVSSGVVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIILD 386
            F+TY  V  G VL+G+D  C + GI +V++KM+DG IRTL+ V+H+PN+ ++LI L  LD
Sbjct: 134  FATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 193

Query: 387  FVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYR--------------FSSSFF 524
              GY + G   ILKV KG+LVV +A     +  A LY  +               S+S  
Sbjct: 194  CKGYKYSGGDGILKVTKGSLVVMKA----DIKSANLYHLQGTTILGNVATVSDSLSNSDA 249

Query: 525  FHVKHNYHQIMTYEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKRVSFNIEL 704
             ++ H     M+ EIG+ +  M       GLL  Q   KL  CE+ +  K KRV FN   
Sbjct: 250  TNLWHMRLGHMS-EIGLAELSMR------GLLDGQSIGKLKFCEHCIFGKHKRVKFNTST 302

Query: 705  HKFKSILDYIHSNL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFVNFKQ*KA 884
            H  + ILDY+HS+L GP    S G A YM+T ++D  R VW YFLK+K   F  FK+ K 
Sbjct: 303  HTTEGILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVWPYFLKHKYQAFNVFKEWKT 362

Query: 885  LVEKQTEKKVKCLRTDNGLEFYDGDFNKF*KDEGICPIY 1001
            +VE+QTE+KVK LRTDNG+EF    F  + K EGI   Y
Sbjct: 363  MVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHY 401


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score =  196 bits (498), Expect = 3e-52
 Identities = 121/292 (41%), Positives = 162/292 (55%), Gaps = 14/292 (4%)
 Frame = +3

Query: 207  FSTYTPVSSGVVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIILD 386
            F+TY  V  G VL+G+D  C + GI  V++KM+DG I TL+ V+H+PN+ ++LI L  LD
Sbjct: 149  FATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLD 208

Query: 387  FVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYR--------------FSSSFF 524
              GY + G   ILKV KG+LVV +A     +  A LY  R               S+S  
Sbjct: 209  RKGYKYSGGDGILKVTKGSLVVMKA----DIKSANLYHLRGTTILGNVAAVSDSLSNSDA 264

Query: 525  FHVKHNYHQIMTYEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKRVSFNIEL 704
             ++ H     M+ EIG+ +      +   GLL  Q   KL  CE+ +  K KRV FN   
Sbjct: 265  TNLWHMRLGHMS-EIGLAE------LSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTST 317

Query: 705  HKFKSILDYIHSNL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFVNFKQ*KA 884
            H  + ILDY+HS+L GP    S G A Y++T +DD  R VW YFLK+K   F  FK+ K 
Sbjct: 318  HTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKT 377

Query: 885  LVEKQTEKKVKCLRTDNGLEFYDGDFNKF*KDEGICPIYIHVNDGKLESKSR 1040
            +VE+QTE+KVK LRTDNG+EF    F  + K EGI   Y    +G  E  +R
Sbjct: 378  MVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTPQQNGVAERMNR 429


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa]
          Length = 944

 Score =  196 bits (498), Expect = 3e-52
 Identities = 121/292 (41%), Positives = 162/292 (55%), Gaps = 14/292 (4%)
 Frame = +3

Query: 207  FSTYTPVSSGVVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIILD 386
            F+TY  V  G VL+G+D  C + GI  V++KM+DG I TL+ V+H+PN+ ++LI L  LD
Sbjct: 149  FATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLD 208

Query: 387  FVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYR--------------FSSSFF 524
              GY + G   ILKV KG+LVV +A     +  A LY  R               S+S  
Sbjct: 209  RKGYKYSGGDGILKVTKGSLVVMKA----DIKSANLYHLRGTTILGNVAAVSDSLSNSDA 264

Query: 525  FHVKHNYHQIMTYEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKRVSFNIEL 704
             ++ H     M+ EIG+ +      +   GLL  Q   KL  CE+ +  K KRV FN   
Sbjct: 265  TNLWHMRLGHMS-EIGLAE------LSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTST 317

Query: 705  HKFKSILDYIHSNL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFVNFKQ*KA 884
            H  + ILDY+HS+L GP    S G A Y++T +DD  R VW YFLK+K   F  FK+ K 
Sbjct: 318  HTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKT 377

Query: 885  LVEKQTEKKVKCLRTDNGLEFYDGDFNKF*KDEGICPIYIHVNDGKLESKSR 1040
            +VE+QTE+KVK LRTDNG+EF    F  + K EGI   Y    +G  E  +R
Sbjct: 378  MVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHYTPQQNGVAERMNR 429


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa]
          Length = 1205

 Score =  196 bits (499), Expect = 4e-52
 Identities = 119/279 (42%), Positives = 159/279 (56%), Gaps = 14/279 (5%)
 Frame = +3

Query: 207  FSTYTPVSSGVVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIILD 386
            F+TY  V  G VL+G+D  C + GI +V++KM+DG IRTL+ V+H+PN+ ++LI L  LD
Sbjct: 302  FATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLD 361

Query: 387  FVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYR--------------FSSSFF 524
              GY + G   ILKV KG+LVV +A     +  A LY  +               S+S  
Sbjct: 362  CKGYKYSGGDGILKVTKGSLVVMKA----DIKSANLYHLQGTTILGNVATVSDSLSNSDA 417

Query: 525  FHVKHNYHQIMTYEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKRVSFNIEL 704
             ++ H     M+ EIG+ +  M       GLL  Q   KL  CE+ +  K KRV FN   
Sbjct: 418  TNLWHMRLGHMS-EIGLAELSMR------GLLDGQSIGKLKFCEHCIFGKHKRVKFNTST 470

Query: 705  HKFKSILDYIHSNL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFVNFKQ*KA 884
            H  + ILDY+HS+L GP    S G A YM+T ++D  R VW YFLK+K   F  FK+ K 
Sbjct: 471  HTTEGILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVWPYFLKHKYQAFNVFKEWKT 530

Query: 885  LVEKQTEKKVKCLRTDNGLEFYDGDFNKF*KDEGICPIY 1001
            +VE+QTE+KVK LRTDNG+EF    F  + K EGI   Y
Sbjct: 531  MVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMRHY 569


>dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]
          Length = 778

 Score =  194 bits (493), Expect = 5e-52
 Identities = 118/279 (42%), Positives = 158/279 (56%), Gaps = 14/279 (5%)
 Frame = +3

Query: 207  FSTYTPVSSGVVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIILD 386
            F+TY  V  G VL+G+D  C + GI +V++KM+DG IRTL+ V+H+PN+ ++LI    LD
Sbjct: 283  FATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISFCTLD 342

Query: 387  FVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYR--------------FSSSFF 524
              GY + G   ILKV KG+LVV +A     +  A LY  R               S+S  
Sbjct: 343  RKGYKYSGGDGILKVTKGSLVVMKA----DIKSANLYHLRGTTILGNVAAVSDSLSNSDA 398

Query: 525  FHVKHNYHQIMTYEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKRVSFNIEL 704
             ++ H     M+ EIG+ +      +   GLL  Q   KL  CE+ +  K KRV FN   
Sbjct: 399  TNLWHMRLGHMS-EIGLAE------LSKRGLLYGQSIGKLKFCEHCIFGKHKRVKFNTST 451

Query: 705  HKFKSILDYIHSNL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFVNFKQ*KA 884
            H  + ILDY+HS+L GP    S G A Y++T +DD  R VW YFLK+K   F  FK+ K 
Sbjct: 452  HTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKT 511

Query: 885  LVEKQTEKKVKCLRTDNGLEFYDGDFNKF*KDEGICPIY 1001
            +VE+QTE+KVK LRTDNG+EF    F  + K EGI   Y
Sbjct: 512  MVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVRHY 550


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score =  196 bits (498), Expect = 6e-52
 Identities = 119/279 (42%), Positives = 158/279 (56%), Gaps = 14/279 (5%)
 Frame = +3

Query: 207  FSTYTPVSSGVVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIILD 386
            F+TY  +  G VL+G+D  C + GI +V++KM+DG IRTL+ V+H+PN+ ++LI L  LD
Sbjct: 352  FATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLD 411

Query: 387  FVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYR--------------FSSSFF 524
              GY + G   ILKV KG+LVV +A     +  A LY  R               S+S  
Sbjct: 412  RKGYKYSGGDGILKVTKGSLVVMKA----DIKSANLYHLRGTTILGNVAAVSDSLSNSDA 467

Query: 525  FHVKHNYHQIMTYEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKRVSFNIEL 704
             ++ H     M+ EIG+ +    +      LL  Q   KL  CE+ +  K KRV FN   
Sbjct: 468  TNLWHMRLGHMS-EIGLAELSKRE------LLDGQSIGKLKFCEHCIFGKHKRVKFNTST 520

Query: 705  HKFKSILDYIHSNL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFVNFKQ*KA 884
            H  + ILDY+HS+L GP    S G A YM+T +DD  R VW YFLK+K   F  FK+ K 
Sbjct: 521  HTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKT 580

Query: 885  LVEKQTEKKVKCLRTDNGLEFYDGDFNKF*KDEGICPIY 1001
            +VE+QTEKKVK LRTDNG+EF    F  + K EGI   Y
Sbjct: 581  MVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHY 619


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1312

 Score =  196 bits (498), Expect = 6e-52
 Identities = 119/279 (42%), Positives = 158/279 (56%), Gaps = 14/279 (5%)
 Frame = +3

Query: 207  FSTYTPVSSGVVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIILD 386
            F+TY  +  G VL+G+D  C + GI +V++KM+DG IRTL+ V+H+PN+ ++LI L  LD
Sbjct: 352  FATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLD 411

Query: 387  FVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYR--------------FSSSFF 524
              GY + G   ILKV KG+LVV +A     +  A LY  R               S+S  
Sbjct: 412  RKGYKYSGGDGILKVTKGSLVVMKA----DIKSANLYHLRGTTILGNVAAVSDSLSNSDA 467

Query: 525  FHVKHNYHQIMTYEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKRVSFNIEL 704
             ++ H     M+ EIG+ +    +      LL  Q   KL  CE+ +  K KRV FN   
Sbjct: 468  TNLWHMRLGHMS-EIGLAELSKRE------LLDGQSIGKLKFCEHCIFGKHKRVKFNTST 520

Query: 705  HKFKSILDYIHSNL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFVNFKQ*KA 884
            H  + ILDY+HS+L GP    S G A YM+T +DD  R VW YFLK+K   F  FK+ K 
Sbjct: 521  HTTEGILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKT 580

Query: 885  LVEKQTEKKVKCLRTDNGLEFYDGDFNKF*KDEGICPIY 1001
            +VE+QTEKKVK LRTDNG+EF    F  + K EGI   Y
Sbjct: 581  MVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGIVHHY 619


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score =  195 bits (496), Expect = 1e-51
 Identities = 119/279 (42%), Positives = 157/279 (56%), Gaps = 14/279 (5%)
 Frame = +3

Query: 207  FSTYTPVSSGVVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIILD 386
            F+TY  V  G VL+G+D  C + GI +V++KM+DG IRTL  V+H+PN+ ++LI L  LD
Sbjct: 226  FATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLD 285

Query: 387  FVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYR--------------FSSSFF 524
              GY + G   ILKV KG+LVV +A     +  A LY  R               S+S  
Sbjct: 286  RKGYKYSGGDGILKVTKGSLVVMKA----DIKYANLYHLRGTTILGNVAAVSDSLSNSDA 341

Query: 525  FHVKHNYHQIMTYEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKRVSFNIEL 704
             ++ H     M+ EIG+ +      +   GLL  Q   KL  CE+ +  K KRV FN   
Sbjct: 342  TNLWHMRLGHMS-EIGLAE------LSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTST 394

Query: 705  HKFKSILDYIHSNL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFVNFKQ*KA 884
            H  + ILDY+HS+L GP    S G A YM+T +DD  R VW YFLK+K   F  FK+ K 
Sbjct: 395  HTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKT 454

Query: 885  LVEKQTEKKVKCLRTDNGLEFYDGDFNKF*KDEGICPIY 1001
            +VE+QTE+KVK LRTDNG+E     F  + K EGI   Y
Sbjct: 455  MVERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVRHY 493


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  193 bits (490), Expect = 7e-51
 Identities = 121/282 (42%), Positives = 158/282 (56%), Gaps = 21/282 (7%)
 Frame = +3

Query: 207  FSTYTPVSSG-VVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIIL 383
            FS+Y PV  G VV +G+DN C IVGI SV++K  DG+ RTL  V+++P MS+NLI L  L
Sbjct: 307  FSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTL 366

Query: 384  DFVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYRF------------------ 509
            D  GY + GS  +LKV KG+LV  +    G L  A+LY  R                   
Sbjct: 367  DAEGYKYSGSDGVLKVSKGSLVCLK----GDLNSAKLYVLRGCTLTGSDSAAAAVTNDEP 422

Query: 510  SSSFFFHVK--HNYHQIMTYEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKR 683
            S +  +H++  H  H  MT             ++   LL    +SK+  CE+ +  K KR
Sbjct: 423  SKTNLWHMRLGHMSHLGMTE------------LMKRNLLKGCTSSKIKFCEHCIFGKHKR 470

Query: 684  VSFNIELHKFKSILDYIHSNL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFV 863
            V FN  +H  K  LDY+H++L GP+   S G A YMLT IDD  R VW YFLK+K D F 
Sbjct: 471  VQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFT 530

Query: 864  NFKQ*KALVEKQTEKKVKCLRTDNGLEFYDGDFNKF*KDEGI 989
             FK  K ++E+QTE+KVK LRTDNG EF    FN + + EGI
Sbjct: 531  AFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGI 572


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  192 bits (489), Expect = 9e-51
 Identities = 121/282 (42%), Positives = 158/282 (56%), Gaps = 21/282 (7%)
 Frame = +3

Query: 207  FSTYTPVSSG-VVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIIL 383
            FS+Y PV  G VV +G+DN C IVGI SV++K  DG+ RTL  V+++P MS+NLI L  L
Sbjct: 307  FSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTL 366

Query: 384  DFVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYRF------------------ 509
            D  GY + GS  +LKV KG+LV  +    G L  A+LY  R                   
Sbjct: 367  DAEGYKYSGSDGVLKVSKGSLVCLK----GDLNSAKLYVLRGCTLTGSDSAAAAVTNDEP 422

Query: 510  SSSFFFHVK--HNYHQIMTYEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKR 683
            S +  +H++  H  H  MT             ++   LL    +SK+  CE+ +  K KR
Sbjct: 423  SKTNLWHMRLGHMSHLGMTE------------LMKRNLLKGCTSSKIKFCEHCIFGKHKR 470

Query: 684  VSFNIELHKFKSILDYIHSNL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFV 863
            V FN  +H  K  LDY+H++L GP+   S G A YMLT IDD  R VW YFLK+K D F 
Sbjct: 471  VQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTVIDDYSRKVWPYFLKHKDDTFT 530

Query: 864  NFKQ*KALVEKQTEKKVKCLRTDNGLEFYDGDFNKF*KDEGI 989
             FK  K ++E+QTE+KVK LRTDNG EF    FN + + EGI
Sbjct: 531  AFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFNDYCRQEGI 572


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1373

 Score =  192 bits (488), Expect = 1e-50
 Identities = 115/270 (42%), Positives = 157/270 (58%), Gaps = 9/270 (3%)
 Frame = +3

Query: 207  FSTYTPVSSG-VVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIIL 383
            FS+Y PV  G VV +G+DN C IVGI SV++K  DG+ RTL  V+++P MS+NLI L  L
Sbjct: 307  FSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTL 366

Query: 384  DFVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYR--------FSSSFFFHVKH 539
            D  GY + GS  +LKV KG+LV  +    G +  A+LY  R         +++   + + 
Sbjct: 367  DAEGYKYSGSDGVLKVSKGSLVCLK----GDVNSAKLYVLRGCTLTGSDSAAAAITNDEP 422

Query: 540  NYHQIMTYEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKRVSFNIELHKFKS 719
            +   +    +G         ++   LL    +SK+  CE+ +  K KRV FN  +H  K 
Sbjct: 423  SKTNLWHMRLGHMSHLGMTELMKRNLLKGCTSSKIKFCEHCIFGKHKRVQFNTSVHTTKG 482

Query: 720  ILDYIHSNL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFVNFKQ*KALVEKQ 899
             LDY+H++L GP+   S G A YMLT IDD  R VW YFLK+K D F  FK  K ++E+Q
Sbjct: 483  TLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQ 542

Query: 900  TEKKVKCLRTDNGLEFYDGDFNKF*KDEGI 989
            TE+KVK LRTDNG EF    FN + + EGI
Sbjct: 543  TERKVKLLRTDNGGEFCSHAFNDYCRQEGI 572


>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa]
          Length = 1335

 Score =  191 bits (484), Expect = 4e-50
 Identities = 120/282 (42%), Positives = 157/282 (55%), Gaps = 21/282 (7%)
 Frame = +3

Query: 207  FSTYTPVSSG-VVLIGNDNSCNIVGIDSVKVKMYDGIIRTLTVVKHVPNMSKNLILLIIL 383
            FS+Y PV  G VV +G+DN C IVGI SV++K  DG+ RTL  V+++P MS+NLI L  L
Sbjct: 309  FSSYKPVQKGDVVRMGDDNPCAIVGIGSVQIKTDDGMTRTLKNVRYIPGMSRNLISLSTL 368

Query: 384  DFVGYNFIGSANILKVVKGALVVTRA*QVGKLCVARLYTYRF------------------ 509
            D  GY + GS  +LKV KG+LV  +    G L  A+LY  R                   
Sbjct: 369  DAEGYKYSGSDGVLKVSKGSLVCLK----GDLNSAKLYVLRGCTLPGSDSAAAAVTNDEP 424

Query: 510  SSSFFFHVK--HNYHQIMTYEIGVYQ*EMFDYII*IGLLSRQFTSKLDLCEYYLVSKQKR 683
            S +  +H++  H  H  MT             ++   LL    +SK+  CE+ +  K KR
Sbjct: 425  SKTNLWHMRLGHMSHLGMTE------------LMKRNLLKGYTSSKIKFCEHCIFGKHKR 472

Query: 684  VSFNIELHKFKSILDYIHSNL*GPTSTLSKGDACYMLTFIDD*LRNVWIYFLKNKSDMFV 863
            V FN  +H  K  LDY+H++L GP+   S G A YMLT IDD  R VW YFLK+K D F 
Sbjct: 473  VQFNTSVHTTKGTLDYVHADLWGPSKKPSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFT 532

Query: 864  NFKQ*KALVEKQTEKKVKCLRTDNGLEFYDGDFNKF*KDEGI 989
             FK  K ++E+QTE+KVK L TDNG EF    FN + + EGI
Sbjct: 533  AFKNWKVMIERQTERKVKLLCTDNGGEFCSHAFNDYCRQEGI 574