BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00048158
         (1770 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60317.1| hypothetical protein VITISV_002851 [Vitis vinifera]    50   4e-08
gb|PNX93152.1| retrotransposon-related protein, partial [Trifoli...    47   6e-06

>emb|CAN60317.1| hypothetical protein VITISV_002851 [Vitis vinifera]
          Length = 975

 Score = 50.4 bits (119), Expect(2) = 4e-08
 Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
 Frame = -3

Query: 337 F*NICTSRGILHKITCLYSSKKITVLIAYFLINRSSSSILNGFIPXXXXXLV*PMFSLTP 158
           F +  +  GILH+ +C ++ ++  V    +LINR  SSIL+  IP      + P++ L P
Sbjct: 563 FTSFMSQHGILHQSSCAHTPQQNGVAEPCYLINRMPSSILHDQIPHSLIFPIQPLYFL-P 621

Query: 157 HVFRFYIIVMSLVLGIKNLALVLLRV------RTQNAYHCYDPRT 41
            VF     V +L LG   L+    +       R Q  Y CY P T
Sbjct: 622 RVFGCTCFVHTLTLGQDKLSATATKCIFLGYSRLQKGYRCYSPDT 666



 Score = 37.7 bits (86), Expect(2) = 4e-08
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = -1

Query: 534 VQVLYILLFCHFIDDYSHIYRVFLLKSQAEVFGVFQYF 421
           V  L    F  FIDDYS    +FL+K++AE+F +FQ F
Sbjct: 498 VSTLGFQYFVTFIDDYSRCTWLFLMKNRAELFSIFQKF 535


>gb|PNX93152.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 592

 Score = 47.0 bits (110), Expect(2) = 6e-06
 Identities = 29/97 (29%), Positives = 48/97 (49%)
 Frame = -3

Query: 337 F*NICTSRGILHKITCLYSSKKITVLIAYFLINRSSSSILNGFIPXXXXXLV*PMFSLTP 158
           F N  TS G++H+ +C  + ++I VL A +LINR  SS L+  +P        P++ ++P
Sbjct: 230 FNNFMTSYGMVHQSSCPRTPQQI-VLTANYLINRMPSSSLDNKVPHSLLFPDEPLYKVSP 288

Query: 157 HVFRFYIIVMSLVLGIKNLALVLLRVRTQNAYHCYDP 47
            +F     V  L  G+  L    + VR    +  + P
Sbjct: 289 RIFGSTCFVHDLTPGLDKLKARAINVRYTKYFRVFHP 325



 Score = 33.9 bits (76), Expect(2) = 6e-06
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = -1

Query: 510 FCHFIDDYSHIYRVFLLKSQAEVFGVFQYF 421
           F  FIDD+S    +FL+K ++E+F +FQ F
Sbjct: 173 FVTFIDDFSRCTWIFLMKERSELFTIFQNF 202