BLASTX nr result

ID: Cheilocostus21_contig00048033 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00048033
         (1413 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAV79612.1| UBN2_3 domain-containing protein, partial [Cepha...    57   3e-06
dbj|GAV57100.1| UBN2_3 domain-containing protein, partial [Cepha...    55   9e-06
dbj|GAV74048.1| UBN2_3 domain-containing protein [Cephalotus fol...    57   9e-06

>dbj|GAV79612.1| UBN2_3 domain-containing protein, partial [Cephalotus follicularis]
          Length = 127

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
 Frame = +1

Query: 850  SINYLLWAQSIR-YIFFDPTRRIFNTLPCTTMYAFYEIWHQSNMIVLMSQLNNIELNIAS 1026
            S NYLLWAQS++ YI  + T +  N  P     + YE W Q N+++L+   N++E  IA+
Sbjct: 3    SSNYLLWAQSVKIYIMAEKTLKFLNFDPPAPDASGYEDWMQENVVILIWLWNSMEPEIAA 62

Query: 1027 SG---------WDILCTTYAL**NVYHVYCLYEDIFNL 1113
            +          WD L  TY+   N+  +Y LYE +F+L
Sbjct: 63   NVMFHNTAKGVWDDLNDTYSQDKNMNRMYDLYEKMFHL 100


>dbj|GAV57100.1| UBN2_3 domain-containing protein, partial [Cephalotus follicularis]
          Length = 123

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 10/100 (10%)
 Frame = +1

Query: 856  NYLLWAQSIR-YIFFDPTRRIFNTLPCTTMYAFYEIWHQSNMIVLMSQLNNIELNIASSG 1032
            NYLLWAQ+++ YI      +  N+ P T   + YE W Q N ++L+   N+++L IA++ 
Sbjct: 1    NYLLWAQAVKIYIMAKKKLKFLNSDPPTPDASGYEGWMQENALILIWLSNSMKLEIAANV 60

Query: 1033 ---------WDILCTTYAL**NVYHVYCLYEDIFNLK*DG 1125
                     WD L  TY+   N+  VY LY+ +F+L+  G
Sbjct: 61   MFHNTAKGVWDDLKDTYSQDKNMNKVYDLYDKMFHLRQSG 100


>dbj|GAV74048.1| UBN2_3 domain-containing protein [Cephalotus follicularis]
          Length = 170

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
 Frame = +1

Query: 832  TTIKLN-SINYLLWAQSIR-YIFFDPTRRIFNTLPCTTMYAFYEIWHQSNMIVLMSQLNN 1005
            T+IKL  S NYLLWA +++ YI         N+ P     + YE W Q N ++L+   NN
Sbjct: 22   TSIKLKGSSNYLLWAHAVKIYIMAKKKLNCLNSDPPAPDASGYEDWMQKNAVILIWLWNN 81

Query: 1006 IELNIASSG---------WDILCTTYAL**NVYHVYCLYEDIFNLK*DG 1125
            +E  IA++          WD L  TY+   N+  VY LY+ +F+L+  G
Sbjct: 82   VEPEIAANVMFHNTAKGVWDDLKDTYSQDKNMNRVYDLYDKMFHLRQSG 130


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