BLASTX nr result

ID: Cheilocostus21_contig00048000 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00048000
         (820 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009393036.1| PREDICTED: uncharacterized protein LOC103978...    47   5e-11

>ref|XP_009393036.1| PREDICTED: uncharacterized protein LOC103978823 [Musa acuminata
           subsp. malaccensis]
          Length = 191

 Score = 46.6 bits (109), Expect(4) = 5e-11
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
 Frame = -2

Query: 591 METL-------NHCLVRSRFHVPDRFGSPPSGAFRMSSCRSFDSNTGVLPFPLPDVSSIN 433
           METL       N    R++  + D FGS PS  FR+ SCR+F S   +L  P  +V S N
Sbjct: 1   METLVAVAHHRNQYCSRNKSRITDHFGSSPSKGFRVISCRTFQSGGAILQSPPSEVFSFN 60

Query: 432 SNGDRDNFIEHVDP 391
           S+ +R +   + +P
Sbjct: 61  SHLERKSSGSYSEP 74



 Score = 37.7 bits (86), Expect(4) = 5e-11
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = -2

Query: 234 TSSPNDFLLLPSAAMENLRRILHLDI 157
           TS  NDFLL  + A ENLRRILHLDI
Sbjct: 163 TSPVNDFLLNNATATENLRRILHLDI 188



 Score = 27.7 bits (60), Expect(4) = 5e-11
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -1

Query: 277 PESKSAPASPTRES 236
           P SKSAP+SPTRES
Sbjct: 149 PMSKSAPSSPTRES 162



 Score = 23.1 bits (48), Expect(4) = 5e-11
 Identities = 15/41 (36%), Positives = 17/41 (41%)
 Frame = -3

Query: 389 YSNXXXXXXXXXXXXXLEQ*RSFSTELCFPKHDFLLRPRVK 267
           YSN             L Q RS S E+  PK D  L+P  K
Sbjct: 112 YSNSPPPSSLPIPKFSLRQKRSVSLEIPVPKSDITLQPMSK 152


Top