BLASTX nr result

ID: Cheilocostus21_contig00047514 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00047514
         (540 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_024162280.1| uncharacterized protein LOC112169478 [Rosa c...    55   7e-06

>ref|XP_024162280.1| uncharacterized protein LOC112169478 [Rosa chinensis]
          Length = 191

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 23/64 (35%), Positives = 37/64 (57%)
 Frame = -2

Query: 275 SRKKHWRRSPIGHLKVNTNGAWDKDSNDAGV*YIIKDNNAKVIVAVALFHRSNSALLAKL 96
           S   HW    + HLKVNT+  WD  +N  G+  +++D+N  ++   + F  ++S L A+ 
Sbjct: 23  SHDTHWTAPKVSHLKVNTDATWDSSTNSCGIAAVVRDSNGLLVGGSSRFDMASSPLAAEA 82

Query: 95  LAIQ 84
           LAIQ
Sbjct: 83  LAIQ 86


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