BLASTX nr result

ID: Cheilocostus21_contig00047047 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00047047
         (513 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009392471.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-13
ref|XP_019709963.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...    70   1e-10
ref|XP_008800870.1| PREDICTED: pentatricopeptide repeat-containi...    69   1e-10
ref|XP_020596567.1| pentatricopeptide repeat-containing protein ...    61   1e-07
ref|XP_020595300.1| pentatricopeptide repeat-containing protein ...    61   1e-07

>ref|XP_009392471.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Musa acuminata subsp. malaccensis]
 ref|XP_018678599.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Musa acuminata subsp. malaccensis]
 ref|XP_018678600.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Musa acuminata subsp. malaccensis]
          Length = 758

 Score = 77.0 bits (188), Expect = 3e-13
 Identities = 37/58 (63%), Positives = 41/58 (70%)
 Frame = +3

Query: 3   ELATDQISKRLGEDVPTVVLLSNMYHEVGRRQDAEKMRNAPQVGVRKEPGLSWVHVVE 176
           ELA DQ+ K  GEDVPTVVL+SNMY EVGR+ DAE +R       RKEPG SWVH  E
Sbjct: 692 ELARDQVMKMQGEDVPTVVLMSNMYCEVGRQHDAENLRKITGSQTRKEPGFSWVHAAE 749


>ref|XP_019709963.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g25970 [Elaeis guineensis]
          Length = 801

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 33/62 (53%), Positives = 41/62 (66%)
 Frame = +3

Query: 6   LATDQISKRLGEDVPTVVLLSNMYHEVGRRQDAEKMRNAPQVGVRKEPGLSWVHVVEPSS 185
           LA D +    GE+ PT+VL+SNMY EVG+  DAE  R   +VG+RKEPGLSWV   E   
Sbjct: 736 LARDHVMGMQGEESPTLVLMSNMYSEVGKWDDAENARRRMRVGLRKEPGLSWVRTTEEPL 795

Query: 186 CN 191
           C+
Sbjct: 796 CS 797


>ref|XP_008800870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Phoenix dactylifera]
 ref|XP_008800871.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Phoenix dactylifera]
          Length = 764

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 32/62 (51%), Positives = 40/62 (64%)
 Frame = +3

Query: 6   LATDQISKRLGEDVPTVVLLSNMYHEVGRRQDAEKMRNAPQVGVRKEPGLSWVHVVEPSS 185
           LA D +    GED PT+VL+SNMY EVG+  D E  R   ++G+RKEPGLSWV   E   
Sbjct: 699 LARDHVMGMQGEDSPTLVLMSNMYSEVGKWDDVENTRRRMRIGLRKEPGLSWVRTTEEPL 758

Query: 186 CN 191
           C+
Sbjct: 759 CS 760


>ref|XP_020596567.1| pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Phalaenopsis equestris]
 ref|XP_020596568.1| pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Phalaenopsis equestris]
          Length = 476

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
 Frame = +3

Query: 3   ELATDQISKRLGEDVPTVVLLSNMYHEVGRRQDAEKMRNAPQV-GVRKEPGLSWVHVVE 176
           +LA  ++S  + ED PTVVL+SNM  EVG+  DAE+ R    + GVRKEPGLSWV + E
Sbjct: 415 QLARKKLSGMVWEDKPTVVLMSNMLSEVGKWDDAEEERKRISMEGVRKEPGLSWVQIAE 473


>ref|XP_020595300.1| pentatricopeptide repeat-containing protein At4g13650-like
           [Phalaenopsis equestris]
          Length = 759

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
 Frame = +3

Query: 3   ELATDQISKRLGEDVPTVVLLSNMYHEVGRRQDAEKMRNAPQV-GVRKEPGLSWVHVVE 176
           +LA  ++S  + ED PTVVL+SNM  EVG+  DAE+ R    + GVRKEPGLSWV + E
Sbjct: 698 QLARKKLSGMVWEDKPTVVLMSNMLSEVGKWDDAEEERKRISMEGVRKEPGLSWVQIAE 756


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