BLASTX nr result
ID: Cheilocostus21_contig00047015
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00047015
(1688 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN73484.1| hypothetical protein VITISV_029448 [Vitis vinifera] 276 2e-79
emb|CAN84036.1| hypothetical protein VITISV_024166 [Vitis vinifera] 254 1e-69
emb|CAN60152.1| hypothetical protein VITISV_021503 [Vitis vinifera] 248 1e-68
ref|XP_024044151.1| uncharacterized protein LOC18046468 isoform ... 187 8e-63
ref|XP_024044152.1| uncharacterized protein LOC18046468 isoform ... 187 8e-63
ref|XP_024044153.1| uncharacterized protein LOC18046468 isoform ... 187 8e-63
emb|CAN62229.1| hypothetical protein VITISV_010990 [Vitis vinifera] 226 4e-60
emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera] 98 9e-56
emb|CAN65367.1| hypothetical protein VITISV_032069 [Vitis vinifera] 151 6e-54
gb|KYP63367.1| Retrovirus-related Pol polyprotein from transposo... 100 2e-53
emb|CAN69872.1| hypothetical protein VITISV_032285 [Vitis vinifera] 98 2e-52
gb|KYP62388.1| Retrovirus-related Pol polyprotein from transposo... 107 2e-51
gb|PKA63925.1| Retrovirus-related Pol polyprotein from transposo... 99 2e-50
emb|CAN65095.1| hypothetical protein VITISV_011639 [Vitis vinifera] 99 4e-50
gb|PRQ42837.1| putative RNA-directed DNA polymerase [Rosa chinen... 92 2e-49
emb|CAN82483.1| hypothetical protein VITISV_006799 [Vitis vinifera] 100 2e-49
gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa] 92 2e-49
gb|PRQ55789.1| putative RNA-directed DNA polymerase [Rosa chinen... 92 4e-49
emb|CAN75466.1| hypothetical protein VITISV_025054 [Vitis vinifera] 97 9e-49
gb|KYP41234.1| Retrovirus-related Pol polyprotein from transposo... 192 1e-48
>emb|CAN73484.1| hypothetical protein VITISV_029448 [Vitis vinifera]
Length = 835
Score = 276 bits (705), Expect = 2e-79
Identities = 191/418 (45%), Positives = 244/418 (58%), Gaps = 16/418 (3%)
Frame = -3
Query: 1272 NQFRAKIKRFKTNDARDYFNQNLSTYFQSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAH 1093
NQF KIK F+T++ARDYFNQ LS YFQSQ I+++ SCV T QN VAE+K GHLLN
Sbjct: 144 NQFXVKIKSFRTDNARDYFNQILSPYFQSQGILHDSSCVNTXQQNGVAERKNGHLLNTTR 203
Query: 1092 ALLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEILNNF---FFTSK---PLVFS 931
ALLFQG+VPK Y GEA+L A YMI R+PS+VL+NKSP+EIL +F F TS P VF
Sbjct: 204 ALLFQGNVPKSYWGEAVLTATYMINRIPSRVLDNKSPVEILKSFYPHFRTSNGLTPRVFG 263
Query: 930 HQRYLGVQPLFTSITN*KAN*ILKLSNAFFLGTLPLKGAANVTVHHPKKYIFLLMSHLLK 751
++ V + +A + F + KG ++P F + + +
Sbjct: 264 CTAFVHVHXQHRDKLDPRA-----IKCXFXGYSSTQKG---YKCYNPSTRKFYISADVTF 315
Query: 750 IVLFSQKLIFRRRLQ*MKTMLV-SQLNHLKLFDLSLVPICRTEAKLEFS*THSESNFNQT 574
I ++ + LQ +M+ S + DL V E + S S S+
Sbjct: 316 IE--NKPFFHKSSLQGEISMMEDSPYXSFEPLDLPHVSTHGDEEPMSSSVPASVSH---- 369
Query: 573 TAYAKYPGFSQVY*KRKAIPE*IQVQESNLESGNEIMERYDL-LSTQSMKTPAN------ 415
+P F +VY + K IPE QVQESN + GNEI + D L TQ +T N
Sbjct: 370 ----NFPQFPKVYSREKVIPEQKQVQESNSDLGNEITVKSDRPLHTQLGETSTNSTDNLD 425
Query: 414 IDLLIAIRKGTSEYTKRPLYPLSHYVSLKNISSNHRKFIVSLNTIAIPKTVFEALSKKAW 235
+DL IA+RKGT E T RPLYPLSHYVSLK++S H+ FIVSLNT IP TV EAL+K+
Sbjct: 426 LDLPIAVRKGTKECTNRPLYPLSHYVSLKHLSLAHKNFIVSLNTXIIPNTVCEALTKREX 485
Query: 234 RDAMKEEMIALEKK*NKTWDC*KTKREKHC--CKWIFTLKYKADGTLEWYKA*LVAKG 67
+DAM+ EM ALEK NKTW+ + K+ CK IFTLKYK DG+LE +KA LV KG
Sbjct: 486 KDAMRXEMSALEK--NKTWEIVXRPKGKNIVDCKXIFTLKYKXDGSLERHKARLVVKG 541
Score = 152 bits (384), Expect = 3e-35
Identities = 76/151 (50%), Positives = 99/151 (65%), Gaps = 2/151 (1%)
Frame = -1
Query: 1685 LYHLQTCQENKXXXXXXXXXXSNKDTIWLYHLHFVYSCFRVLKVMFPNLFKGLDFSKIHC 1506
LY+L++ Q+ SNKDTIWLYHL + FRVLKVMFP+LF+GLD S+ HC
Sbjct: 4 LYYLESSQKTSNNLSLSFLSSSNKDTIWLYHLRLGHQSFRVLKVMFPHLFQGLDISEFHC 63
Query: 1505 EICELAKHTSVSFPISNERSSQPFHLIYSILGSSTNLTFLGHGD--SCLIDYCTRVIWIF 1332
E CEL KHT VSFPISN+RSS PFHLI+S + + + + LID CT+V WIF
Sbjct: 64 ETCELVKHTRVSFPISNKRSSHPFHLIHSDIWGPSTIPNVSEARWFVSLIDDCTQVTWIF 123
Query: 1331 LLKQQSDVSTIIPYFHLLIKTNLGLK*RGLR 1239
LLKQ+ DV+ +IP FH +++ +K + R
Sbjct: 124 LLKQKYDVTIVIPNFHSMVQNQFXVKIKSFR 154
>emb|CAN84036.1| hypothetical protein VITISV_024166 [Vitis vinifera]
Length = 1337
Score = 254 bits (649), Expect = 1e-69
Identities = 172/390 (44%), Positives = 226/390 (57%), Gaps = 13/390 (3%)
Frame = -3
Query: 1188 SQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAHALLFQGSVPKFYQGEAILNAAYMITRLP 1009
++ I+++ SC+ TP QN VAE+K GHLLN ALLFQG+VPK Y GEA+L A YMI R+P
Sbjct: 516 TRGILHDSSCINTPQQNGVAERKNGHLLNTTRALLFQGNVPKSYWGEAVLTATYMINRIP 575
Query: 1008 SQVLENKSPMEILNNF---FFTSK---PLVFSHQRYLGVQPLFTSITN*KAN*ILKLSNA 847
S+VL+NKSP+EIL +F F TS P VF ++ V + ++
Sbjct: 576 SRVLDNKSPVEILKSFYPHFRTSNGITPRVFGCTAFVHVHSQHRDKLD------PRVIKC 629
Query: 846 FFLGTLPLKGAANVTVHHPKKYIFLLMSHLLKIVLFSQKLIFRRRLQ*MKTMLVSQLNHL 667
FLG K ++P F + + V F++ F + + + + +
Sbjct: 630 VFLGYSSTK--KGYKCYNPSARKFYISAD----VTFTENKPFFHKSSLQGGISMMEDSPY 683
Query: 666 KLFDLSLVPICRTEAKLEFS*THSESNFNQTTAYAKYPGFSQVY*KRKAIPE*IQVQESN 487
+ F+ +P T E S+ + +P F +VY + KAIPE QVQESN
Sbjct: 684 ESFEPLDLPHVLTHGDEE-----PVSSSVPASVTHNFPQFPKVYSREKAIPEQKQVQESN 738
Query: 486 LESGNEIMERYDL-LSTQSMKTPAN------IDLLIAIRKGTSEYTKRPLYPLSHYVSLK 328
L+ GNEIM R D L TQ +T + +D IA+RKGT E T RPLYPLSHYVSLK
Sbjct: 739 LDLGNEIMVRSDPPLHTQPGETSTDSTDNLDLDFPIAVRKGTRECTNRPLYPLSHYVSLK 798
Query: 327 NISSNHRKFIVSLNTIAIPKTVFEALSKKAWRDAMKEEMIALEKK*NKTWDC*KTKREKH 148
++S H+ FIVSLNTI IP TV EAL+K+ W++AM+EEM LEK NKTW+ E
Sbjct: 799 HLSPAHKNFIVSLNTIIIPNTVSEALTKREWKNAMREEMSTLEK--NKTWEI----VEIV 852
Query: 147 CCKWIFTLKYKADGTLEWYKA*LVAKGYTQ 58
CKWIFTLKYKADG+LE +K LV KGYTQ
Sbjct: 853 DCKWIFTLKYKADGSLERHKVRLVPKGYTQ 882
Score = 122 bits (305), Expect = 4e-25
Identities = 68/117 (58%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
Frame = -1
Query: 1685 LYHLQTCQENKXXXXXXXXXXSNKDTIWLYHLHFVYSCFRVLKVMFPNLFKGLDFSKIHC 1506
LYHL++ Q+ SNKDTIWLYHL + FRVLKVMFP+LF+GLD S+ HC
Sbjct: 403 LYHLESSQKTSNNLSLSLLSSSNKDTIWLYHLRLGHPSFRVLKVMFPHLFQGLDISEFHC 462
Query: 1505 EICELAKHTSVSFPISNERSSQPFHLIYS-ILGSSTNLTFLG-HGDSCLIDYCTRVI 1341
E CELAKHT V FPISN+RSS PFHLI+S I G ST G LID CTR I
Sbjct: 463 ETCELAKHTRVYFPISNKRSSHPFHLIHSDIWGPSTIPNVSGARWFVFLIDDCTRGI 519
Score = 94.4 bits (233), Expect = 3e-16
Identities = 52/95 (54%), Positives = 65/95 (68%), Gaps = 3/95 (3%)
Frame = -3
Query: 1191 QSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAHALLFQGSVPKFYQGEAILNAAYMITRL 1012
Q I+++ SCV TP QN VAE+K GHLLN ALLFQG+VPK Y E +L A YMI R+
Sbjct: 125 QKTSILHDSSCVNTPQQNGVAERKNGHLLNTTQALLFQGNVPKSYWRETVLTATYMINRI 184
Query: 1011 PSQVLENKSPMEILNNF---FFTSKPLVFSHQRYL 916
S+VL+NKSP+EIL +F F TS L + R+L
Sbjct: 185 LSRVLDNKSPVEILKSFYPHFRTSNGLTPKNCRFL 219
>emb|CAN60152.1| hypothetical protein VITISV_021503 [Vitis vinifera]
Length = 890
Score = 248 bits (632), Expect = 1e-68
Identities = 179/419 (42%), Positives = 234/419 (55%), Gaps = 26/419 (6%)
Frame = -3
Query: 1179 IIYE*SCVYTP*QNEVAEKKIGHLLNIAHALLFQGSVPKFYQGEAILNAAYMITRLPSQV 1000
I+++ SCV TP QN V E+K GHLLN ALLFQG+VPK Y GEA+L A YMI R+PS+V
Sbjct: 109 ILHDSSCVNTPQQNGVVERKNGHLLNTTRALLFQGNVPKSYWGEAVLTATYMINRIPSRV 168
Query: 999 LENKSPMEILNNF---FFTSK---PLVFSHQRYLGVQPLFTSITN*KAN*ILKLSNAFFL 838
L+NKSP+EIL +F F TS P VF ++ V N A FL
Sbjct: 169 LDNKSPVEILKSFYPHFRTSNGLTPRVFGCTAFVHVHSQHRDKLNPXA------IKCVFL 222
Query: 837 GTLPLKGAANVTVHHPKKYIFLLMSHLLKIVLFSQKLIFRRRLQ*MKTMLVSQLNHLKLF 658
G + ++P F + + V F++ F + + + + + + F
Sbjct: 223 GYSSTQ--KRYKCYNPSARKFYISAD----VTFTENKPFFPKSSLQGDISMMEDSLYEXF 276
Query: 657 DLSLVPICRTEAKLEFS*THSES-------NFNQTTAYAKYPGFSQVY*KRKAIPE*IQV 499
+ +P T E + ES + N TT P + V + P+ +V
Sbjct: 277 EXLDLPHVSTHGDEEPKSSEPESXESITPESPNFTTEPVSSPVPASV---TRNFPQVPKV 333
Query: 498 QESNLESGNEIMERYDL-LSTQSMKTPAN------IDLLIAIRKGTSEYTKRPLYPLSHY 340
QESN + GNEI R D L TQ +T + ++L I +RKGT E T RPLYPLSHY
Sbjct: 334 QESNSDPGNEITXRSDPPLHTQPGETSTBSTDNLDLNLPIXVRKGTRECTNRPLYPLSHY 393
Query: 339 VSLKNISSNHRKFIVSLNTIAIPKTVFEALSKKAWRDAMKEEMIALEKK*NKTWDC*KTK 160
VSLK++S H+ FIVSLNT IP TV EAL+K+ W+DAM+EEM ALEK NKTW+ +
Sbjct: 394 VSLKHLSLAHKNFIVSLNTTIIPNTVSEALTKREWKDAMREEMSALEK--NKTWEIVERP 451
Query: 159 REKHC--CKWIFTLKYKADGTLEWYKA*LVAKGYTQ----DLQS*LSRNPLVAKNEYCE 1
+ K+ CKWIFTLKY ADG+LE +KA LVAKGYTQ D Q S L+AKNEYC+
Sbjct: 452 KGKNIVDCKWIFTLKYNADGSLERHKARLVAKGYTQTYGFDYQETFS---LIAKNEYCK 507
>ref|XP_024044151.1| uncharacterized protein LOC18046468 isoform X1 [Citrus clementina]
Length = 1808
Score = 187 bits (474), Expect(2) = 8e-63
Identities = 151/424 (35%), Positives = 222/424 (52%), Gaps = 20/424 (4%)
Frame = -3
Query: 1269 QFRAKIKRFKTNDARDYFNQNLSTYFQSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAHA 1090
QF+AKI+ F+T++ R+YF L YF I+++ SCV TP QN VAE+K HLL +A +
Sbjct: 971 QFQAKIQVFRTDNGREYFATALGHYFMENGIVHQSSCVDTPQQNGVAERKNRHLLEVARS 1030
Query: 1089 LLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEILNNFF-----FTS-KPLVFSH 928
L+F VPK + GEAIL A+Y+I R+P+++ +SP+ + + FTS P +F
Sbjct: 1031 LMFTNRVPKQFWGEAILTASYLINRMPTRIFNFQSPLNVFTKVYPYAKVFTSLPPKIFGC 1090
Query: 927 QRYLGVQPLFTSITN*KAN*ILKLSNAFFLGTLPLKGAANVTVHHPKKYIFLLMSHLLKI 748
++ V S + +A FLG P + + P F + + +
Sbjct: 1091 IAFVHVHKQNRSKLDPRA------LKCVFLGYSPTQ--KGYKCYDPLSNKFFVT---MDV 1139
Query: 747 VLFSQKLIFRRRLQ*MKTMLVSQLNHLK---LFDLSL-VPICRTEAKLEFS*THSESNFN 580
F + F KT L + +H + ++LSL +PI + + S N
Sbjct: 1140 TFFENRSFFP------KTSLQGE-DHTQEDHFWELSLPMPIMSCVPPVPST---MPSIVN 1189
Query: 579 QTTAYAKYPGFS-QVY*KRKAIPE*IQ----VQESNLESGNEIME---RYDLLSTQSMKT 424
+ + P QVY +R + Q+S+ +GN + + +S ++T
Sbjct: 1190 NEKSLERVPEPELQVYTRRNSKRSNHHSSPHCQDSDPNTGNLELAGNVHSNPISESVLET 1249
Query: 423 PANIDLLIAIRKGTSEYTKRPLYPLSHYVSLKNISSNHRKFIVSLNTIAIPKTVFEALSK 244
++D+ IA RKGT T L+P+S YVS +S R F +L+ IAIPK+V +ALS
Sbjct: 1250 TNDLDVPIAQRKGTRSCT---LHPISKYVSYHRLSPFFRAFTANLSVIAIPKSVQDALSI 1306
Query: 243 KAWRDAMKEEMIALEKK*NKTWDC*KTKREKH--CCKWIFTLKYKADGTLEWYKA*LVAK 70
WRDA+ EM ALEK NKTW+ K EK CKWIFT+KY+ADG+LE YKA LVAK
Sbjct: 1307 PEWRDAVYAEMGALEK--NKTWELVKLPEEKKPVGCKWIFTVKYRADGSLERYKARLVAK 1364
Query: 69 GYTQ 58
G+TQ
Sbjct: 1365 GFTQ 1368
Score = 84.7 bits (208), Expect(2) = 8e-63
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Frame = -1
Query: 1616 KDTIWLYHLHFVYSCFRVLKVMFPNLFKGLDFSKIHCEICELAKHTSVSFPISNERSSQP 1437
+D I L+HL + F L+ +FP LFK + S CEIC L+KH SFP + S P
Sbjct: 853 EDEIMLWHLRLGHPSFSYLQHLFPLLFKNKNPSLFQCEICVLSKHHRASFPSQPYKKSAP 912
Query: 1436 FHLIYSILGSSTNLTFLGHGD--SCLIDYCTRVIWIFLLKQQSDVSTIIPYFHLLIKTNL 1263
F LI+S + + +T + ID TRV W++LLK++S+ +T+ FH +I+T
Sbjct: 913 FSLIHSDIWGPSRVTNISGAKWFITFIDDHTRVCWVYLLKEKSETATVFKTFHTMIQTQF 972
Query: 1262 GLK 1254
K
Sbjct: 973 QAK 975
>ref|XP_024044152.1| uncharacterized protein LOC18046468 isoform X2 [Citrus clementina]
Length = 1616
Score = 187 bits (474), Expect(2) = 8e-63
Identities = 151/424 (35%), Positives = 222/424 (52%), Gaps = 20/424 (4%)
Frame = -3
Query: 1269 QFRAKIKRFKTNDARDYFNQNLSTYFQSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAHA 1090
QF+AKI+ F+T++ R+YF L YF I+++ SCV TP QN VAE+K HLL +A +
Sbjct: 779 QFQAKIQVFRTDNGREYFATALGHYFMENGIVHQSSCVDTPQQNGVAERKNRHLLEVARS 838
Query: 1089 LLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEILNNFF-----FTS-KPLVFSH 928
L+F VPK + GEAIL A+Y+I R+P+++ +SP+ + + FTS P +F
Sbjct: 839 LMFTNRVPKQFWGEAILTASYLINRMPTRIFNFQSPLNVFTKVYPYAKVFTSLPPKIFGC 898
Query: 927 QRYLGVQPLFTSITN*KAN*ILKLSNAFFLGTLPLKGAANVTVHHPKKYIFLLMSHLLKI 748
++ V S + +A FLG P + + P F + + +
Sbjct: 899 IAFVHVHKQNRSKLDPRA------LKCVFLGYSPTQ--KGYKCYDPLSNKFFVT---MDV 947
Query: 747 VLFSQKLIFRRRLQ*MKTMLVSQLNHLK---LFDLSL-VPICRTEAKLEFS*THSESNFN 580
F + F KT L + +H + ++LSL +PI + + S N
Sbjct: 948 TFFENRSFFP------KTSLQGE-DHTQEDHFWELSLPMPIMSCVPPVPST---MPSIVN 997
Query: 579 QTTAYAKYPGFS-QVY*KRKAIPE*IQ----VQESNLESGNEIME---RYDLLSTQSMKT 424
+ + P QVY +R + Q+S+ +GN + + +S ++T
Sbjct: 998 NEKSLERVPEPELQVYTRRNSKRSNHHSSPHCQDSDPNTGNLELAGNVHSNPISESVLET 1057
Query: 423 PANIDLLIAIRKGTSEYTKRPLYPLSHYVSLKNISSNHRKFIVSLNTIAIPKTVFEALSK 244
++D+ IA RKGT T L+P+S YVS +S R F +L+ IAIPK+V +ALS
Sbjct: 1058 TNDLDVPIAQRKGTRSCT---LHPISKYVSYHRLSPFFRAFTANLSVIAIPKSVQDALSI 1114
Query: 243 KAWRDAMKEEMIALEKK*NKTWDC*KTKREKH--CCKWIFTLKYKADGTLEWYKA*LVAK 70
WRDA+ EM ALEK NKTW+ K EK CKWIFT+KY+ADG+LE YKA LVAK
Sbjct: 1115 PEWRDAVYAEMGALEK--NKTWELVKLPEEKKPVGCKWIFTVKYRADGSLERYKARLVAK 1172
Query: 69 GYTQ 58
G+TQ
Sbjct: 1173 GFTQ 1176
Score = 84.7 bits (208), Expect(2) = 8e-63
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Frame = -1
Query: 1616 KDTIWLYHLHFVYSCFRVLKVMFPNLFKGLDFSKIHCEICELAKHTSVSFPISNERSSQP 1437
+D I L+HL + F L+ +FP LFK + S CEIC L+KH SFP + S P
Sbjct: 661 EDEIMLWHLRLGHPSFSYLQHLFPLLFKNKNPSLFQCEICVLSKHHRASFPSQPYKKSAP 720
Query: 1436 FHLIYSILGSSTNLTFLGHGD--SCLIDYCTRVIWIFLLKQQSDVSTIIPYFHLLIKTNL 1263
F LI+S + + +T + ID TRV W++LLK++S+ +T+ FH +I+T
Sbjct: 721 FSLIHSDIWGPSRVTNISGAKWFITFIDDHTRVCWVYLLKEKSETATVFKTFHTMIQTQF 780
Query: 1262 GLK 1254
K
Sbjct: 781 QAK 783
>ref|XP_024044153.1| uncharacterized protein LOC18046468 isoform X3 [Citrus clementina]
Length = 1379
Score = 187 bits (474), Expect(2) = 8e-63
Identities = 151/424 (35%), Positives = 222/424 (52%), Gaps = 20/424 (4%)
Frame = -3
Query: 1269 QFRAKIKRFKTNDARDYFNQNLSTYFQSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAHA 1090
QF+AKI+ F+T++ R+YF L YF I+++ SCV TP QN VAE+K HLL +A +
Sbjct: 542 QFQAKIQVFRTDNGREYFATALGHYFMENGIVHQSSCVDTPQQNGVAERKNRHLLEVARS 601
Query: 1089 LLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEILNNFF-----FTS-KPLVFSH 928
L+F VPK + GEAIL A+Y+I R+P+++ +SP+ + + FTS P +F
Sbjct: 602 LMFTNRVPKQFWGEAILTASYLINRMPTRIFNFQSPLNVFTKVYPYAKVFTSLPPKIFGC 661
Query: 927 QRYLGVQPLFTSITN*KAN*ILKLSNAFFLGTLPLKGAANVTVHHPKKYIFLLMSHLLKI 748
++ V S + +A FLG P + + P F + + +
Sbjct: 662 IAFVHVHKQNRSKLDPRA------LKCVFLGYSPTQ--KGYKCYDPLSNKFFVT---MDV 710
Query: 747 VLFSQKLIFRRRLQ*MKTMLVSQLNHLK---LFDLSL-VPICRTEAKLEFS*THSESNFN 580
F + F KT L + +H + ++LSL +PI + + S N
Sbjct: 711 TFFENRSFFP------KTSLQGE-DHTQEDHFWELSLPMPIMSCVPPVPST---MPSIVN 760
Query: 579 QTTAYAKYPGFS-QVY*KRKAIPE*IQ----VQESNLESGNEIME---RYDLLSTQSMKT 424
+ + P QVY +R + Q+S+ +GN + + +S ++T
Sbjct: 761 NEKSLERVPEPELQVYTRRNSKRSNHHSSPHCQDSDPNTGNLELAGNVHSNPISESVLET 820
Query: 423 PANIDLLIAIRKGTSEYTKRPLYPLSHYVSLKNISSNHRKFIVSLNTIAIPKTVFEALSK 244
++D+ IA RKGT T L+P+S YVS +S R F +L+ IAIPK+V +ALS
Sbjct: 821 TNDLDVPIAQRKGTRSCT---LHPISKYVSYHRLSPFFRAFTANLSVIAIPKSVQDALSI 877
Query: 243 KAWRDAMKEEMIALEKK*NKTWDC*KTKREKH--CCKWIFTLKYKADGTLEWYKA*LVAK 70
WRDA+ EM ALEK NKTW+ K EK CKWIFT+KY+ADG+LE YKA LVAK
Sbjct: 878 PEWRDAVYAEMGALEK--NKTWELVKLPEEKKPVGCKWIFTVKYRADGSLERYKARLVAK 935
Query: 69 GYTQ 58
G+TQ
Sbjct: 936 GFTQ 939
Score = 84.7 bits (208), Expect(2) = 8e-63
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Frame = -1
Query: 1616 KDTIWLYHLHFVYSCFRVLKVMFPNLFKGLDFSKIHCEICELAKHTSVSFPISNERSSQP 1437
+D I L+HL + F L+ +FP LFK + S CEIC L+KH SFP + S P
Sbjct: 424 EDEIMLWHLRLGHPSFSYLQHLFPLLFKNKNPSLFQCEICVLSKHHRASFPSQPYKKSAP 483
Query: 1436 FHLIYSILGSSTNLTFLGHGD--SCLIDYCTRVIWIFLLKQQSDVSTIIPYFHLLIKTNL 1263
F LI+S + + +T + ID TRV W++LLK++S+ +T+ FH +I+T
Sbjct: 484 FSLIHSDIWGPSRVTNISGAKWFITFIDDHTRVCWVYLLKEKSETATVFKTFHTMIQTQF 543
Query: 1262 GLK 1254
K
Sbjct: 544 QAK 546
>emb|CAN62229.1| hypothetical protein VITISV_010990 [Vitis vinifera]
Length = 1404
Score = 226 bits (577), Expect = 4e-60
Identities = 159/375 (42%), Positives = 206/375 (54%), Gaps = 15/375 (4%)
Frame = -3
Query: 1137 EVAEKKIGHLLNIAHALLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEILNNF- 961
++AE+K GHLLN ALLFQG+VPK Y G+ +L A YMI R+ S+VL+NKSP+EIL +F
Sbjct: 152 KIAERKNGHLLNTTRALLFQGNVPKSYWGKVVLTATYMINRILSRVLDNKSPVEILKSFY 211
Query: 960 --FFTSK---PLVFSHQRYLGVQPLFTSITN*KAN*ILKLSNAFFLGTLPLKGAANVTVH 796
F TS P VF ++ + + +A FLG +
Sbjct: 212 PQFRTSNGLTPRVFRCIAFVHIHNQHRDKLDPRA------IKCVFLGYSSTQKGYKCYNP 265
Query: 795 HPKKYIFLLMSHLLKIVLFSQKLIFRRRLQ*MKTMLVSQLNHLKLFDLSLVPICRTEAKL 616
+K+ K LF K + + M+ L L +S + L
Sbjct: 266 SARKFYISADVTFTKNKLFFPKSSLQGEISMMEDSFCKSFEPLDLPHVSTHGDEEPVSSL 325
Query: 615 EFS*THSESNFNQTTAYAKYPGFSQVY*KRKAIPE*IQVQESNLESGNEIMERYDL-LST 439
+ T S+ + +P F +VY + K PE QVQESN + GNEI R D L T
Sbjct: 326 IPTTTDPVSSPVLASVTRNFPQFPKVYSREKVSPEQKQVQESNSDPGNEITVRSDPHLHT 385
Query: 438 QSMKTPAN------IDLLIAIRKGTSEYTKRPLYPLSHYVSLKNISSNHRKFIVSLNTIA 277
Q +T + +DL IAIRK T E T RPLY LSHYVSLK++S H+ FIVSLNT
Sbjct: 386 QPSETSIDSTDNLDLDLPIAIRKDTRECTNRPLYLLSHYVSLKHLSPAHKNFIVSLNTTI 445
Query: 276 IPKTVFEALSKKAWRDAMKEEMIALEKK*NKTWDC*KTKREKHC--CKWIFTLKYKADGT 103
IP TV EAL+K+ W++AM+EEM LEK NKTW+ + + K+ CKWIFTLKYKADG
Sbjct: 446 IPNTVSEALTKREWKNAMREEMSVLEK--NKTWEIVERPKGKNIVDCKWIFTLKYKADGF 503
Query: 102 LEWYKA*LVAKGYTQ 58
LE +KA LVAKGYTQ
Sbjct: 504 LERHKARLVAKGYTQ 518
>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
Length = 1505
Score = 95.5 bits (236), Expect(3) = 9e-56
Identities = 43/102 (42%), Positives = 70/102 (68%)
Frame = -3
Query: 1269 QFRAKIKRFKTNDARDYFNQNLSTYFQSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAHA 1090
QF+ KI+ F++++ ++Y N+ L +F + I+++ SC TP QN +AE+K HLL +A A
Sbjct: 609 QFQTKIQVFRSDNGKEYINKALGKFFLEKGIVHQSSCNDTPQQNGIAERKNKHLLEVARA 668
Query: 1089 LLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEILNN 964
L F VPK+ GEAIL A Y+I R+P+++L K+P+++ N
Sbjct: 669 LCFTTKVPKYLWGEAILTATYLINRMPTRILNFKTPLQVFTN 710
Score = 90.5 bits (223), Expect(3) = 9e-56
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = -2
Query: 952 FKTSSVLTPKVFGRTAFVHIHNQLKGKLDPQAIKCIFLRYSSTQRGCKCYRPSSKKIHIF 773
F+ SS L K+FG T FVHIH+ +GKLDP+A KC+F+ Y+ TQ+G KC+ P SKK+ +
Sbjct: 715 FRLSSTLPLKIFGCTTFVHIHDHNRGKLDPRARKCVFVGYAPTQKGYKCFDPISKKLFVT 774
Query: 772 ADVTFAENCPFFSKTYL*EETS 707
DVTF E+ PFF+ E TS
Sbjct: 775 MDVTFFESKPFFATHLQGESTS 796
Score = 83.2 bits (204), Expect(3) = 9e-56
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Frame = -1
Query: 1619 NKDTIWLYHLHFVYSCFRVLKVMFPNLFKGLDFSKIHCEICELAKHTSVSFPISNERSSQ 1440
+ D I L+H + F+ LK +FP+LF+ + S CE CELAKH SFP+ R S+
Sbjct: 490 SSDDIILWHYRLGHPSFQYLKHLFPSLFRNKNPSSFQCEFCELAKHHRTSFPLQPYRISK 549
Query: 1439 PFHLIYS-ILGSSTNLTFLG-HGDSCLIDYCTRVIWIFLLKQQSDVSTIIPYFHLLIKTN 1266
PF LI+S + G S T G ID TRV W++LL+++S+V + F+ ++ T
Sbjct: 550 PFSLIHSDVWGPSRISTLSGKKWFVTFIDDHTRVSWVYLLREKSEVEEVFKIFYTMVLTQ 609
Query: 1265 LGLK 1254
K
Sbjct: 610 FQTK 613
Score = 98.2 bits (243), Expect = 2e-17
Identities = 57/132 (43%), Positives = 83/132 (62%), Gaps = 2/132 (1%)
Frame = -3
Query: 447 LSTQSMKTPANIDLLIAIRKGTSEYTKRPLYPLSHYVSLKNISSNHRKFIVSLNTIAIPK 268
+S + ++ ++++ IA RKG TK +P+S+Y+S KN+S + F L+ + IPK
Sbjct: 940 ISNSNSESFDDLNIPIATRKGVRSCTK---HPMSNYMSYKNLSPSFFAFTSHLSLVEIPK 996
Query: 267 TVFEALSKKAWRDAMKEEMIALEKK*NKTWDC*KTKREKHC--CKWIFTLKYKADGTLEW 94
V EAL W+ A+ EEM ALEK N TW+ + K CKW+FT+KY ++G+LE
Sbjct: 997 NVQEALQVPEWKKAIFEEMRALEK--NHTWEVMGLPKGKTTVGCKWVFTVKYNSNGSLER 1054
Query: 93 YKA*LVAKGYTQ 58
YKA LVAKG+TQ
Sbjct: 1055 YKARLVAKGFTQ 1066
>emb|CAN65367.1| hypothetical protein VITISV_032069 [Vitis vinifera]
Length = 882
Score = 129 bits (325), Expect(2) = 6e-54
Identities = 65/105 (61%), Positives = 80/105 (76%)
Frame = -3
Query: 1272 NQFRAKIKRFKTNDARDYFNQNLSTYFQSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAH 1093
NQF +IK F+T++ARDYFNQ LS YFQSQ I+++ SCV TP QN V E+K GHLLN
Sbjct: 113 NQFGVRIKSFRTDNARDYFNQILSPYFQSQGILHDSSCVNTPQQNGVXERKNGHLLNTTR 172
Query: 1092 ALLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEILNNFF 958
ALLFQ +VPK Y GEA+L A YM R+ S+VL NKSP+EIL +F+
Sbjct: 173 ALLFQWNVPKSYWGEAVLTATYMTNRILSRVLYNKSPVEILKSFY 217
Score = 112 bits (280), Expect(2) = 6e-54
Identities = 54/98 (55%), Positives = 71/98 (72%)
Frame = -2
Query: 964 FFLYFKTSSVLTPKVFGRTAFVHIHNQLKGKLDPQAIKCIFLRYSSTQRGCKCYRPSSKK 785
F+ +F+TS+ TP+VFG AFVH+H+Q + KLDP+AI C+FL YSSTQ+G KCY PS+ K
Sbjct: 216 FYPHFRTSNGXTPRVFGCIAFVHVHSQHRDKLDPRAIICVFLVYSSTQKGYKCYNPSAIK 275
Query: 784 IHIFADVTFAENCPFFSKTYL*EETSINENNACKPIEP 671
+I ADVT EN FF K+ L E S+ E+N C+ EP
Sbjct: 276 FYISADVTLTENKXFFPKSSLQGEISMMEDNPCESFEP 313
Score = 151 bits (382), Expect = 5e-35
Identities = 82/149 (55%), Positives = 103/149 (69%), Gaps = 7/149 (4%)
Frame = -3
Query: 483 ESGNEIMERYDLLSTQSMKTPA-----NIDLLIAIRKGTSEYTKRPLYPLSHYVSLKNIS 319
ES I + +T+ + +P ++DL IA+RKGT E T RPLYPLSHYVSLK++S
Sbjct: 328 ESSESITPKSPNFTTKPVSSPIPANNLDLDLPIAVRKGTRECTNRPLYPLSHYVSLKHLS 387
Query: 318 SNHRKFIVSLNTIAIPKTVFEALSKKAWRDAMKEEMIALEKK*NKTWDC*KTKREKHC-- 145
H+ FIVSLNT IP TV E L+K+ W+DAM+EEM ALEK NKTW+ + + K+
Sbjct: 388 PAHKNFIVSLNTTIIPNTVSEVLTKREWKDAMREEMSALEK--NKTWEIDERPKGKNIVD 445
Query: 144 CKWIFTLKYKADGTLEWYKA*LVAKGYTQ 58
CKW FTLKYK DG+LE +K LVAKGYTQ
Sbjct: 446 CKWDFTLKYKVDGSLERHKVRLVAKGYTQ 474
Score = 106 bits (265), Expect = 3e-20
Identities = 57/100 (57%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
Frame = -1
Query: 1532 GLDFSKIHCEICELAKHTSVSFPISNERSSQPFHLIYS-ILGSSTNLTFLG-HGDSCLID 1359
GLD S+ H E CELAKHT VSFPISN+RSS PFHLI+S I G ST G LID
Sbjct: 24 GLDISEFHYETCELAKHTLVSFPISNKRSSHPFHLIHSXIWGPSTIXNVSGARWFVSLID 83
Query: 1358 YCTRVIWIFLLKQQSDVSTIIPYFHLLIKTNLGLK*RGLR 1239
CT+V WIFLLKQ+S+VS +IP FHL+++ G++ + R
Sbjct: 84 DCTQVTWIFLLKQKSNVSIVIPNFHLMVQNQFGVRIKSFR 123
>gb|KYP63367.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 465
Score = 99.8 bits (247), Expect(3) = 2e-53
Identities = 53/114 (46%), Positives = 72/114 (63%)
Frame = -3
Query: 1272 NQFRAKIKRFKTNDARDYFNQNLSTYFQSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAH 1093
NQF IKR ++++ +Y N + I++E +CV TP QN VAE+K HLL +
Sbjct: 239 NQFEKNIKRIRSDNDTEYVNHEFINFLSHNGIVHELTCVNTPQQNGVAERKNRHLLEVTR 298
Query: 1092 ALLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEILNNFFFTSKPLVFS 931
ALLFQ SVPK Y GEA+L A Y+I RLP+++L SP+E L + F S PL+ S
Sbjct: 299 ALLFQMSVPKNYWGEAVLTATYLINRLPTRILNGISPIESLLS-FVPSCPLISS 351
Score = 84.7 bits (208), Expect(3) = 2e-53
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Frame = -1
Query: 1607 IWLYHLHFVYSCFRVLKVMFPNLFKGLDFSKIHCEICELAKHTSVSFPISNERSSQPFHL 1428
IWL+H + F ++K +FP+LF +C+IC+L+KH S+PISN++S+ PF L
Sbjct: 126 IWLHHKRLGHPSFNLIKSLFPHLFIKESVESFNCDICQLSKHQRASYPISNKKSTSPFDL 185
Query: 1427 IY---------SILGSSTNLTFLGHGDSCLIDYCTRVIWIFLLKQQSDVSTIIPYFHLLI 1275
I+ SI G+ +TF ID CTRV W +L+K +S+V I F LI
Sbjct: 186 IHSDVWGLVVESISGAKWFVTF--------IDDCTRVTWTYLMKNKSEVFQIFVNFFRLI 237
Query: 1274 K 1272
+
Sbjct: 238 Q 238
Score = 76.6 bits (187), Expect(3) = 2e-53
Identities = 35/79 (44%), Positives = 51/79 (64%)
Frame = -2
Query: 940 SVLTPKVFGRTAFVHIHNQLKGKLDPQAIKCIFLRYSSTQRGCKCYRPSSKKIHIFADVT 761
S L +VFG T FVH H+ + KLDP+A+KC+F+ Y S ++G KCY P S+++ I DVT
Sbjct: 350 SSLPSRVFGCTVFVHSHHPNRSKLDPKALKCVFIGYPSNKKGYKCYHPQSRRVFITMDVT 409
Query: 760 FAENCPFFSKTYL*EETSI 704
F E F++ L E ++
Sbjct: 410 FQETQSFYASPPLQGEKAL 428
>emb|CAN69872.1| hypothetical protein VITISV_032285 [Vitis vinifera]
Length = 843
Score = 98.2 bits (243), Expect(3) = 2e-52
Identities = 48/105 (45%), Positives = 70/105 (66%)
Frame = -3
Query: 1272 NQFRAKIKRFKTNDARDYFNQNLSTYFQSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAH 1093
++F AK+ ++N+ ++YFNQ L+ Y Q + II+ S TP QN +AE+K HLL I
Sbjct: 581 SEFDAKVSGIRSNNGKEYFNQYLTPYLQKEGIIHYSSYNDTPQQNGIAERKNRHLLEITR 640
Query: 1092 ALLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEILNNFF 958
AL+FQ +VPK + GE +L A Y+I LPS++L SP+E L+ FF
Sbjct: 641 ALIFQMNVPKSFWGEVVLTATYLINSLPSRILNYSSPIETLSRFF 685
Score = 89.0 bits (219), Expect(3) = 2e-52
Identities = 41/81 (50%), Positives = 56/81 (69%)
Frame = -2
Query: 964 FFLYFKTSSVLTPKVFGRTAFVHIHNQLKGKLDPQAIKCIFLRYSSTQRGCKCYRPSSKK 785
FF F + L+P++FG AFVHI+ + KLDP+A+KCIF+ YS T++G KCY P+SK+
Sbjct: 684 FFPKFDGFNHLSPRIFGCVAFVHIYAHQRTKLDPRALKCIFVGYSPTKKGYKCYHPASKR 743
Query: 784 IHIFADVTFAENCPFFSKTYL 722
+ DV+F E PFFS YL
Sbjct: 744 FFVTMDVSFNEKQPFFSSPYL 764
Score = 70.9 bits (172), Expect(3) = 2e-52
Identities = 31/82 (37%), Positives = 51/82 (62%)
Frame = -1
Query: 1616 KDTIWLYHLHFVYSCFRVLKVMFPNLFKGLDFSKIHCEICELAKHTSVSFPISNERSSQP 1437
++ +WL H + F +LK +FPN+F+ L+ HC++CE AKH VSFP+SN++S P
Sbjct: 504 EEQVWLSHFRLGHPPFLLLKKIFPNMFEKLNVQNFHCDVCEGAKHHCVSFPLSNKKSFVP 563
Query: 1436 FHLIYSILGSSTNLTFLGHGDS 1371
F LI++ + T + + D+
Sbjct: 564 FSLIHTDVWGPTKVYSISEFDA 585
>gb|KYP62388.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1362
Score = 92.8 bits (229), Expect(3) = 2e-51
Identities = 44/105 (41%), Positives = 69/105 (65%)
Frame = -3
Query: 1272 NQFRAKIKRFKTNDARDYFNQNLSTYFQSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAH 1093
N F + I +T++ R+YF+ +L+ Y Q I ++ SC +TP QN VAE+K H+L +A
Sbjct: 553 NIFGSSIHILRTDNGREYFSNDLNGYLQEHGIFHQSSCNHTPQQNGVAERKNRHILEVAR 612
Query: 1092 ALLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEILNNFF 958
+L+F +VP + GEA+L A Y+I RLPS+ L+ +P+ L +FF
Sbjct: 613 SLMFTTNVPNHFWGEAVLTATYLINRLPSKPLQFLTPLNCLKSFF 657
Score = 87.0 bits (214), Expect(3) = 2e-51
Identities = 40/76 (52%), Positives = 51/76 (67%)
Frame = -2
Query: 964 FFLYFKTSSVLTPKVFGRTAFVHIHNQLKGKLDPQAIKCIFLRYSSTQRGCKCYRPSSKK 785
FF + + PK+FG T FVH + +GKLDP++ KCIFL YS TQ+G KCY P SK+
Sbjct: 656 FFPLVRMLESIQPKIFGCTVFVHNSSPTRGKLDPKSHKCIFLGYSPTQKGYKCYCPKSKR 715
Query: 784 IHIFADVTFAENCPFF 737
+I D+TF EN PFF
Sbjct: 716 FYISCDITFLENQPFF 731
Score = 74.7 bits (182), Expect(3) = 2e-51
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Frame = -1
Query: 1607 IWLYHLHFVYSCFRVLKVMFPNLFKGLDFSKIHCEICELAKHTSVSFPISNERSSQPFHL 1428
++L+H + F LK ++P+LF + S CE C LAK + ++P + SQPFHL
Sbjct: 439 VFLWHNRLGHPNFNYLKHLYPDLFINKNISSFRCEHCILAKQSRTNYPSHPYQPSQPFHL 498
Query: 1427 IYSILGSSTNLTFLGHGD--SCLIDYCTRVIWIFLLKQQSDVSTIIPYFHLLIKTNLG 1260
I+S + + + + ID TRV W++LLK++S+ ST FH L+ G
Sbjct: 499 IHSDIWGPSRIPNINGARWFITFIDDHTRVCWVYLLKEKSEASTTFKQFHKLVTNIFG 556
Score = 107 bits (268), Expect = 1e-20
Identities = 59/125 (47%), Positives = 80/125 (64%), Gaps = 2/125 (1%)
Frame = -3
Query: 426 TPANIDLLIAIRKGTSEYTKRPLYPLSHYVSLKNISSNHRKFIVSLNTIAIPKTVFEALS 247
T DL IA+RKG TK + +S++++ N+S +R F+ L+ + IP TVF+AL
Sbjct: 804 TMDEFDLPIALRKGVRSCTK---HSISNFLTYSNLSPRYRAFVTELDRVQIPNTVFDALK 860
Query: 246 KKAWRDAMKEEMIALEKK*NKTWDC*KTKREKHC--CKWIFTLKYKADGTLEWYKA*LVA 73
+ WR A+ EEM ALE+ NKTWD K +EK C+WIFT K ADG ++ YKA LVA
Sbjct: 861 DEKWRAAVLEEMAALEE--NKTWDIVKLPKEKKVVGCRWIFTTKMGADGKIDRYKARLVA 918
Query: 72 KGYTQ 58
+GYTQ
Sbjct: 919 QGYTQ 923
>gb|PKA63925.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 975
Score = 99.4 bits (246), Expect(3) = 2e-50
Identities = 49/100 (49%), Positives = 69/100 (69%)
Frame = -3
Query: 1269 QFRAKIKRFKTNDARDYFNQNLSTYFQSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAHA 1090
QF++KI+ KT++A++YFN L Y II+ SCV TP QN VAE+K HLL +A A
Sbjct: 521 QFQSKIQVLKTDNAKEYFNSTLGPYLSKHGIIHISSCVDTPQQNGVAERKNRHLLEVARA 580
Query: 1089 LLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEIL 970
++F VPK + GEAIL A Y+I R+PS+VL+ ++P +L
Sbjct: 581 IMFFNHVPKHFWGEAILTATYLINRMPSRVLKFQTPRHVL 620
Score = 85.5 bits (210), Expect(3) = 2e-50
Identities = 42/79 (53%), Positives = 56/79 (70%)
Frame = -2
Query: 943 SSVLTPKVFGRTAFVHIHNQLKGKLDPQAIKCIFLRYSSTQRGCKCYRPSSKKIHIFADV 764
SS L KVFG ++FVHIH Q + KLDP+++KCIFL YSS Q+G KCY P ++K++ DV
Sbjct: 631 SSNLPLKVFGCSSFVHIHQQHRTKLDPKSLKCIFLGYSSNQKGYKCYSPITRKVYNSMDV 690
Query: 763 TFAENCPFFSKTYL*EETS 707
TF EN +F K+ + E S
Sbjct: 691 TFFENQSYFPKSEIQGENS 709
Score = 66.6 bits (161), Expect(3) = 2e-50
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = -1
Query: 1607 IWLYHLHFVYSCFRVLKVMFPNLFKGLDFSKIHCEICELAKHTSVSFPISNERSSQPFHL 1428
+ L+H + F ++ +FP+LF + CE+C+LAKHT + + S PF +
Sbjct: 406 VMLWHCRLGHPNFAYIEKLFPHLFINKKSNFYQCEVCQLAKHTRQVYSNLQYKPSHPFSV 465
Query: 1427 IYS-ILGSSTNLTFLG-HGDSCLIDYCTRVIWIFLLKQQSDVSTIIPYFHLLIKTNLGLK 1254
I+S I G S G ID TR W FL+K++S+ +TI FH +I T K
Sbjct: 466 IHSDIWGPSRKKNINGARWFVSFIDDHTRTTWTFLMKEKSETATIFQSFHSMISTQFQSK 525
Score = 89.7 bits (221), Expect = 6e-15
Identities = 49/117 (41%), Positives = 75/117 (64%), Gaps = 2/117 (1%)
Frame = -3
Query: 402 IAIRKGTSEYTKRPLYPLSHYVSLKNISSNHRKFIVSLNTIAIPKTVFEALSKKAWRDAM 223
IA RKG T +P+ +V+ + ++R F+ +L+++ +P ++ EAL AW+ A+
Sbjct: 768 IAHRKGVRRCTG---HPIERFVAYGKLLPSYRVFVSNLDSVQVPNSIQEALKVPAWKQAV 824
Query: 222 KEEMIALEKK*NKTWDC*KTKREKHC--CKWIFTLKYKADGTLEWYKA*LVAKGYTQ 58
+EE+ ALE N TW + K+ CKWIFT+KYKADG++E +KA LVAKG+TQ
Sbjct: 825 EEEIQALEN--NDTWSLTELPHGKNPVGCKWIFTVKYKADGSVERFKARLVAKGFTQ 879
>emb|CAN65095.1| hypothetical protein VITISV_011639 [Vitis vinifera]
Length = 1377
Score = 98.6 bits (244), Expect(3) = 4e-50
Identities = 47/108 (43%), Positives = 76/108 (70%)
Frame = -3
Query: 1269 QFRAKIKRFKTNDARDYFNQNLSTYFQSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAHA 1090
QF++KI+ K+++ARDYFN + + + I++ SCV TP QN +AE+K HLL +A +
Sbjct: 608 QFQSKIQILKSDNARDYFNSIIGEFLAQEGIVHLSSCVDTPQQNGIAERKNRHLLEVARS 667
Query: 1089 LLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEILNNFFFTSK 946
L+F +VPK + G+A+L AAY+I R+PS+VL+ ++P + L F T++
Sbjct: 668 LMFSMNVPKLFWGQAVLTAAYLINRMPSRVLKFQTPCQTLLKSFPTTR 715
Score = 85.5 bits (210), Expect(3) = 4e-50
Identities = 39/81 (48%), Positives = 54/81 (66%)
Frame = -2
Query: 940 SVLTPKVFGRTAFVHIHNQLKGKLDPQAIKCIFLRYSSTQRGCKCYRPSSKKIHIFADVT 761
S + PK+FG + FVHI+ Q + KLDP+++KCIFL YSS Q+G KCY P ++K + DVT
Sbjct: 718 STIPPKIFGCSVFVHINQQHRSKLDPRSLKCIFLGYSSNQKGYKCYSPVTRKFYNLMDVT 777
Query: 760 FAENCPFFSKTYL*EETSINE 698
F E P++ K + E S E
Sbjct: 778 FFETQPYYPKNDIQGENSTQE 798
Score = 66.2 bits (160), Expect(3) = 4e-50
Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Frame = -1
Query: 1619 NKDTIWLYHLHFVYSCFRVLKVMFPNLFKGLDFSKIHCEICELAKHTSVSFPISNERSSQ 1440
N I L+H + + LK +FP+LF S CEIC+L+K FPI + S
Sbjct: 490 NDSAIMLWHYRLGHPNVKYLKHLFPSLFNKNPKS-FECEICQLSKQVRSHFPIQPYKESS 548
Query: 1439 PFHLIYS-ILGSSTNLTFLG-HGDSCLIDYCTRVIWIFLLKQQSDVSTIIPYFHLLIKTN 1266
PF +I+S I G S G ID TR+ W+FL+K++S+ S I F +I+T
Sbjct: 549 PFSMIHSDIWGPSRIKNVTGTRWLVSFIDVHTRLTWVFLMKEKSETSQIFKNFKNMIQTQ 608
Query: 1265 LGLK 1254
K
Sbjct: 609 FQSK 612
Score = 89.4 bits (220), Expect(2) = 1e-15
Identities = 50/121 (41%), Positives = 72/121 (59%), Gaps = 2/121 (1%)
Frame = -3
Query: 414 IDLLIAIRKGTSEYTKRPLYPLSHYVSLKNISSNHRKFIVSLNTIAIPKTVFEALSKKAW 235
+++ IA RKG T+ +P+ +++S +S R F S+ I +P+ + EA W
Sbjct: 882 LNMPIAWRKGVRSCTQ---HPIGNFISYDKLSPTFRAFTSSITEIPVPRNIQEAFKYPKW 938
Query: 234 RDAMKEEMIALEKK*NKTWDC*KTKREKHC--CKWIFTLKYKADGTLEWYKA*LVAKGYT 61
+ + EE+ ALEK N TW+ R K CKWIFT+KYKADG ++ YKA LVAKG+T
Sbjct: 939 KAVVDEEVRALEK--NGTWEITDLPRGKKPIRCKWIFTIKYKADGNVDRYKARLVAKGFT 996
Query: 60 Q 58
Q
Sbjct: 997 Q 997
Score = 24.3 bits (51), Expect(2) = 1e-15
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -1
Query: 71 KGTHKTYKVDYQETL-*LQKMNTV 3
KG ++Y +DYQET + K+NTV
Sbjct: 993 KGFTQSYGIDYQETFAPVAKLNTV 1016
>gb|PRQ42837.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1231
Score = 91.7 bits (226), Expect(3) = 2e-49
Identities = 42/103 (40%), Positives = 71/103 (68%)
Frame = -3
Query: 1269 QFRAKIKRFKTNDARDYFNQNLSTYFQSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAHA 1090
Q+ A +K F++++ ++ N + YFQ II++ SC TP QN V+E+K HLL++A +
Sbjct: 333 QYDAHVKVFRSDNGGEFVNHSFHEYFQHHGIIHQTSCPQTPEQNGVSERKNRHLLDMARS 392
Query: 1089 LLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEILNNF 961
LL ++PK+ GEA+L A+++I RLPS L+ + P+E+L+N+
Sbjct: 393 LLLSANMPKYLWGEAVLCASHLINRLPSAPLQGRVPLEVLSNY 435
Score = 82.4 bits (202), Expect(3) = 2e-49
Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Frame = -1
Query: 1607 IWLYHLHFVYSCFRVLKVMFPNLFKGLDFSKIHCEICELAKHTSVSFPISNERSSQPFHL 1428
+WL+H + FRV+K P+LF G+ S +HCE C LAK S+P S S+ PF L
Sbjct: 218 VWLWHRRLGHPSFRVMKKSMPSLFLGISDSSLHCETCALAKSHRSSYPSSFHSSTMPFEL 277
Query: 1427 IYS-ILGSSTNLTFLGHGDSCL-IDYCTRVIWIFLLKQQSDVSTIIPYFHLLIKT 1269
I+S + G S + T G L ID TR+ WI LLK + V + FH L++T
Sbjct: 278 IHSDVWGPSKHSTLSGMRYFVLFIDDFTRLSWIVLLKSKDSVFSAFRAFHSLVRT 332
Score = 73.9 bits (180), Expect(3) = 2e-49
Identities = 30/75 (40%), Positives = 51/75 (68%)
Frame = -2
Query: 961 FLYFKTSSVLTPKVFGRTAFVHIHNQLKGKLDPQAIKCIFLRYSSTQRGCKCYRPSSKKI 782
++ +S+ L +VFG A+VH++ + KLD +A+KC+F+ Y S Q+G KCY P S+K
Sbjct: 435 YVSIPSSNTLPARVFGCVAYVHLYKNQRSKLDARALKCVFVGYGSHQKGYKCYHPQSQKF 494
Query: 781 HIFADVTFAENCPFF 737
++ DV+F+E+ +F
Sbjct: 495 YVTMDVSFSEDACYF 509
Score = 80.9 bits (198), Expect = 4e-12
Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
Frame = -3
Query: 357 YPLSHYVSLKNISSNHRKFIVSLNTIAIPKTVFEALSKKAWRDAMKEEMIALEKK*NKTW 178
YP++ YVS +S + F+ L+++++P V +A+ + W AM EM ALEK N TW
Sbjct: 693 YPVAKYVSTHRLSKPYAAFVNQLSSVSLPSKVQDAMKDEKWMKAMTVEMDALEK--NCTW 750
Query: 177 DC*KTKREKHC--CKWIFTLKYKADGTLEWYKA*LVAKGYTQ 58
+ K C+W++T+K+ +DG+++ YKA LVAKGYTQ
Sbjct: 751 ELVSLPPGKKTVGCRWVYTVKHNSDGSVDRYKARLVAKGYTQ 792
>emb|CAN82483.1| hypothetical protein VITISV_006799 [Vitis vinifera]
Length = 1180
Score = 99.8 bits (247), Expect(3) = 2e-49
Identities = 48/108 (44%), Positives = 76/108 (70%)
Frame = -3
Query: 1269 QFRAKIKRFKTNDARDYFNQNLSTYFQSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAHA 1090
QF++KI+ K+++ARDYFN L + + I++ SCV TP QN +AE+K HLL +A +
Sbjct: 351 QFQSKIQILKSDNARDYFNSILGEFLAQEGIVHLSSCVDTPQQNGIAERKNRHLLEVARS 410
Query: 1089 LLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEILNNFFFTSK 946
L+F +VPK + G+A+L AAY+I R+PS+VL+ ++P + L F T++
Sbjct: 411 LMFSMNVPKLFXGQAVLTAAYLINRMPSRVLKFQTPCQTLLKSFPTTR 458
Score = 84.0 bits (206), Expect(3) = 2e-49
Identities = 39/81 (48%), Positives = 54/81 (66%)
Frame = -2
Query: 940 SVLTPKVFGRTAFVHIHNQLKGKLDPQAIKCIFLRYSSTQRGCKCYRPSSKKIHIFADVT 761
S + PK+FG + FVHI+ Q + KLDP+++KCIFL YSS Q+G KCY P ++K + DVT
Sbjct: 461 STVPPKIFGCSXFVHINQQHRSKLDPRSLKCIFLGYSSNQKGYKCYSPVTRKFYNSMDVT 520
Query: 760 FAENCPFFSKTYL*EETSINE 698
F E P++ K + E S E
Sbjct: 521 FFETQPYYPKNDIQGENSTQE 541
Score = 63.9 bits (154), Expect(3) = 2e-49
Identities = 44/124 (35%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = -1
Query: 1619 NKDTIWLYHLHFVYSCFRVLKVMFPNLFKGLDFSKIHCEICELAKHTSVSFPISNERSSQ 1440
N I L+H + LK +FP+LF S CEIC+L+K FPI + S
Sbjct: 233 NDSAIRLWHYRLGHPNVMYLKHLFPSLFNKNPQS-FECEICQLSKQVRSHFPIQPYKESS 291
Query: 1439 PFHLIYS-ILGSSTNLTFLG-HGDSCLIDYCTRVIWIFLLKQQSDVSTIIPYFHLLIKTN 1266
PF +I+S I G S G ID TR+ W+FL+K++S+ S I F +I+T
Sbjct: 292 PFSMIHSDIWGPSRIKNVTGTRWFVSFIDDHTRLTWVFLMKEKSETSQIFKNFKNMIQTQ 351
Query: 1265 LGLK 1254
K
Sbjct: 352 FQSK 355
Score = 90.9 bits (224), Expect(2) = 4e-16
Identities = 51/121 (42%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
Frame = -3
Query: 414 IDLLIAIRKGTSEYTKRPLYPLSHYVSLKNISSNHRKFIVSLNTIAIPKTVFEALSKKAW 235
+++ IA RKG T+ +P+ +++S +S R F S+ I +P+ + EA W
Sbjct: 625 LNMPIAWRKGVRSCTQ---HPIGNFISYDKLSPTFRAFTSSITEIQVPQNIHEAFKYPKW 681
Query: 234 RDAMKEEMIALEKK*NKTWDC*KTKREKHC--CKWIFTLKYKADGTLEWYKA*LVAKGYT 61
+ A+ EE+ ALEK N TW+ R K CKWIFT+KYKADG ++ YKA LVAKG+T
Sbjct: 682 KAAVDEEVRALEK--NGTWEITDLPRGKKPVGCKWIFTVKYKADGNVDRYKARLVAKGFT 739
Query: 60 Q 58
Q
Sbjct: 740 Q 740
Score = 24.3 bits (51), Expect(2) = 4e-16
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -1
Query: 71 KGTHKTYKVDYQETL-*LQKMNTV 3
KG ++Y +DYQET + K+NTV
Sbjct: 736 KGFTQSYGIDYQETFAPVAKLNTV 759
>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
Length = 1180
Score = 91.7 bits (226), Expect(3) = 2e-49
Identities = 42/103 (40%), Positives = 71/103 (68%)
Frame = -3
Query: 1269 QFRAKIKRFKTNDARDYFNQNLSTYFQSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAHA 1090
Q+ A +K F++++ ++ N + YFQ II++ SC TP QN V+E+K HLL++A +
Sbjct: 295 QYDAHVKVFRSDNGGEFVNHSFHEYFQHHGIIHQTSCPQTPEQNGVSERKNRHLLDMARS 354
Query: 1089 LLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEILNNF 961
LL ++PK+ GEA+L A+++I RLPS L+ + P+E+L+N+
Sbjct: 355 LLLSANMPKYLWGEAVLCASHLINRLPSAPLQGRVPLEVLSNY 397
Score = 82.0 bits (201), Expect(3) = 2e-49
Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Frame = -1
Query: 1607 IWLYHLHFVYSCFRVLKVMFPNLFKGLDFSKIHCEICELAKHTSVSFPISNERSSQPFHL 1428
+WL+H + FRV+K P+LF G+ S +HCE C LAK S+P S S+ PF L
Sbjct: 180 VWLWHRRLGHPSFRVMKKSMPSLFLGISDSSLHCETCALAKSHRSSYPSSFHSSTMPFEL 239
Query: 1427 IYS-ILGSSTNLTFLGHGDSCL-IDYCTRVIWIFLLKQQSDVSTIIPYFHLLIKT 1269
I+S + G S + T G L ID TR+ W+ LLK + V + FH L++T
Sbjct: 240 IHSDVWGPSKHSTLSGMRYFVLFIDDFTRLSWVVLLKSKDSVFSAFRAFHSLVRT 294
Score = 73.9 bits (180), Expect(3) = 2e-49
Identities = 30/75 (40%), Positives = 51/75 (68%)
Frame = -2
Query: 961 FLYFKTSSVLTPKVFGRTAFVHIHNQLKGKLDPQAIKCIFLRYSSTQRGCKCYRPSSKKI 782
++ +S+ L +VFG A+VH++ + KLD +A+KC+F+ Y S Q+G KCY P S+K
Sbjct: 397 YVSIPSSNTLPARVFGCVAYVHLYKNQRSKLDARALKCVFVGYGSHQKGYKCYHPQSQKF 456
Query: 781 HIFADVTFAENCPFF 737
++ DV+F+E+ +F
Sbjct: 457 YVTMDVSFSEDACYF 471
Score = 82.0 bits (201), Expect = 2e-12
Identities = 41/102 (40%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Frame = -3
Query: 357 YPLSHYVSLKNISSNHRKFIVSLNTIAIPKTVFEALSKKAWRDAMKEEMIALEKK*NKTW 178
YP++ YVS +S + F+ L+++++P V +A+ + W AM EM ALEK N TW
Sbjct: 642 YPVAKYVSTHRLSKPYAAFVNQLSSVSLPSKVQDAMKDEKWMKAMTVEMDALEK--NCTW 699
Query: 177 DC*KTKREKHC--CKWIFTLKYKADGTLEWYKA*LVAKGYTQ 58
+ + K C+W++T+K+ +DG+++ YKA LVAKGYTQ
Sbjct: 700 ELVSLPQGKKTVGCRWVYTVKHNSDGSVDRYKARLVAKGYTQ 741
>gb|PRQ55789.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1127
Score = 91.7 bits (226), Expect(3) = 4e-49
Identities = 42/103 (40%), Positives = 71/103 (68%)
Frame = -3
Query: 1269 QFRAKIKRFKTNDARDYFNQNLSTYFQSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAHA 1090
Q+ A +K F++++ ++ N + YFQ II++ SC TP QN V+E+K HLL++A +
Sbjct: 242 QYDAHVKVFRSDNGGEFVNHSFHEYFQHHGIIHQTSCPQTPEQNGVSERKNRHLLDMARS 301
Query: 1089 LLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEILNNF 961
LL ++PK+ GEA+L A+++I RLPS L+ + P+E+L+N+
Sbjct: 302 LLLSANMPKYLWGEAVLCASHLINRLPSAPLQGRVPLEVLSNY 344
Score = 82.0 bits (201), Expect(3) = 4e-49
Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Frame = -1
Query: 1607 IWLYHLHFVYSCFRVLKVMFPNLFKGLDFSKIHCEICELAKHTSVSFPISNERSSQPFHL 1428
+WL+H + FRV+K P+LF G+ S +HCE C LAK S+P S S+ PF L
Sbjct: 127 VWLWHRRLGHPSFRVMKKSMPSLFLGISDSSLHCETCALAKSHRSSYPSSFHSSTMPFEL 186
Query: 1427 IYS-ILGSSTNLTFLGHGDSCL-IDYCTRVIWIFLLKQQSDVSTIIPYFHLLIKT 1269
I+S + G S + T G L ID TR+ W+ LLK + V + FH L++T
Sbjct: 187 IHSDVWGPSKHSTLSGMRYFVLFIDDFTRLSWVVLLKSKDSVFSAFRAFHSLVRT 241
Score = 73.2 bits (178), Expect(3) = 4e-49
Identities = 30/75 (40%), Positives = 50/75 (66%)
Frame = -2
Query: 961 FLYFKTSSVLTPKVFGRTAFVHIHNQLKGKLDPQAIKCIFLRYSSTQRGCKCYRPSSKKI 782
++ +S+ L +VFG A+VH++ + KLD +A+KC+F+ Y S Q+G KCY P S+K
Sbjct: 344 YVSIPSSNTLPARVFGCVAYVHLYKNQRSKLDARALKCVFVGYGSHQKGYKCYHPQSQKF 403
Query: 781 HIFADVTFAENCPFF 737
++ DV+F E+ +F
Sbjct: 404 YVTMDVSFREDACYF 418
Score = 80.9 bits (198), Expect = 4e-12
Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
Frame = -3
Query: 357 YPLSHYVSLKNISSNHRKFIVSLNTIAIPKTVFEALSKKAWRDAMKEEMIALEKK*NKTW 178
YP++ YVS +S + F+ L+++++P V +A+ + W AM EM ALEK N TW
Sbjct: 589 YPVAKYVSTHRLSKPYAAFVNQLSSVSLPSKVQDAMKDEKWMKAMTVEMDALEK--NCTW 646
Query: 177 DC*KTKREKHC--CKWIFTLKYKADGTLEWYKA*LVAKGYTQ 58
+ K C+W++T+K+ +DG+++ YKA LVAKGYTQ
Sbjct: 647 ELVSLPPGKKTVGCRWVYTVKHNSDGSVDRYKARLVAKGYTQ 688
>emb|CAN75466.1| hypothetical protein VITISV_025054 [Vitis vinifera]
Length = 1576
Score = 97.4 bits (241), Expect(3) = 9e-49
Identities = 47/108 (43%), Positives = 75/108 (69%)
Frame = -3
Query: 1269 QFRAKIKRFKTNDARDYFNQNLSTYFQSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAHA 1090
QF++KI+ K+++ARDYFN L + + I++ SCV TP QN +AE+K HLL +A +
Sbjct: 747 QFQSKIQILKSDNARDYFNSILGEFLAQEGIVHLSSCVDTPQQNGIAERKNRHLLEVARS 806
Query: 1089 LLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEILNNFFFTSK 946
L+F +VPK + G+A+L AAY+I R+P +VL+ ++P + L F T++
Sbjct: 807 LMFSMNVPKLFWGQAVLTAAYLINRMPXRVLKFQTPCQTLLKSFPTTR 854
Score = 84.3 bits (207), Expect(3) = 9e-49
Identities = 38/81 (46%), Positives = 54/81 (66%)
Frame = -2
Query: 940 SVLTPKVFGRTAFVHIHNQLKGKLDPQAIKCIFLRYSSTQRGCKCYRPSSKKIHIFADVT 761
S + PK+FG + FVHI+ Q + K+DP+++KCIFL YSS Q+G KCY P ++K + DVT
Sbjct: 857 STVPPKIFGCSVFVHINQQHRSKJDPRSLKCIFLGYSSNQKGYKCYSPVTRKFYNSMDVT 916
Query: 760 FAENCPFFSKTYL*EETSINE 698
F E P++ K + E S E
Sbjct: 917 FFETXPYYPKNDIQGENSTXE 937
Score = 63.9 bits (154), Expect(3) = 9e-49
Identities = 44/124 (35%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = -1
Query: 1619 NKDTIWLYHLHFVYSCFRVLKVMFPNLFKGLDFSKIHCEICELAKHTSVSFPISNERSSQ 1440
N I L+H + LK +FP+LF S CEIC+L+K FPI + S
Sbjct: 629 NDSAIRLWHYRLGHPNVMYLKHLFPSLFNKNPQS-FECEICQLSKQVRSHFPIQPYKESS 687
Query: 1439 PFHLIYS-ILGSSTNLTFLG-HGDSCLIDYCTRVIWIFLLKQQSDVSTIIPYFHLLIKTN 1266
PF +I+S I G S G ID TR+ W+FL+K++S+ S I F +I+T
Sbjct: 688 PFSMIHSDIWGPSRIKNVTGTRWFVSFIDDHTRLTWVFLMKEKSETSQIFKNFKNMIQTQ 747
Query: 1265 LGLK 1254
K
Sbjct: 748 FQSK 751
Score = 87.4 bits (215), Expect(2) = 5e-15
Identities = 50/121 (41%), Positives = 72/121 (59%), Gaps = 2/121 (1%)
Frame = -3
Query: 414 IDLLIAIRKGTSEYTKRPLYPLSHYVSLKNISSNHRKFIVSLNTIAIPKTVFEALSKKAW 235
+++ IA RK T+ +P+ +++S +S R F S+ I +P+ + EA W
Sbjct: 1021 LNMPIAWRKEVKSCTQ---HPIGNFISYDKLSPTFRAFTSSITEIQVPQNIQEAFKYPKW 1077
Query: 234 RDAMKEEMIALEKK*NKTWDC*KTKREKHC--CKWIFTLKYKADGTLEWYKA*LVAKGYT 61
+ A+ EE+ ALEK N TW+ R K CKWIFT+KYKADG ++ YKA LVAKG+T
Sbjct: 1078 KAAVDEEVRALEK--NGTWEITDLPRGKKPVGCKWIFTVKYKADGNVDRYKARLVAKGFT 1135
Query: 60 Q 58
Q
Sbjct: 1136 Q 1136
Score = 24.3 bits (51), Expect(2) = 5e-15
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -1
Query: 71 KGTHKTYKVDYQETL-*LQKMNTV 3
KG ++Y +DYQET + K+NTV
Sbjct: 1132 KGFTQSYGIDYQETFAPVAKLNTV 1155
>gb|KYP41234.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1406
Score = 192 bits (489), Expect = 1e-48
Identities = 145/409 (35%), Positives = 196/409 (47%), Gaps = 4/409 (0%)
Frame = -3
Query: 1272 NQFRAKIKRFKTNDARDYFNQNLSTYFQSQDIIYE*SCVYTP*QNEVAEKKIGHLLNIAH 1093
NQF IKR ++++ +Y N + I++E +CV TP QN V E+K HLL +
Sbjct: 583 NQFGKNIKRIRSDNGTEYVNHEFINFLSHNGIVHELTCVNTPQQNRVVERKNRHLLEVIR 642
Query: 1092 ALLFQGSVPKFYQGEAILNAAYMITRLPSQVLENKSPMEILNNFFFTSKPLVFSHQRYLG 913
ALLFQ SVPK Y GEA+L A Y+I RLP+ +L SP+E L F +S + R G
Sbjct: 643 ALLFQMSVPKNYWGEAVLTATYLINRLPTHILNGISPIESLLTFVPSSSLISSLPSRVCG 702
Query: 912 VQPLFTSITN*KAN*ILKLSNAFFLGTLPLKGAANVTVHHPKKYIFLLMSHLLKIVLFSQ 733
S ++ K F G P H + +F+ M V F +
Sbjct: 703 CTVFVHSHHPNRSKLDPKALKCVFFG-YPSNKKGYKCYHPQSRRVFISMD-----VTFHE 756
Query: 732 KLIFRRR--LQ*MKTMLVSQLNHLKLFDLSLVPICRTEAKLEFS*THSESNFNQTTAYAK 559
F R LQ K + V L+ L L LSL + E + H+E + +
Sbjct: 757 TQSFYARGVLQGEKALGVEDLSFLSLPYLSLQD--AQDLSNEVTMVHNEEEAEE----EE 810
Query: 558 YPGFSQVY*KRKAIPE*IQVQESNLESGNEIMERYDLLSTQSMKTPANIDLLIAIRKGTS 379
F + Y +RK S LE + S + DL IA+RK
Sbjct: 811 DKFFGKKYERRKQ-------PTSALEQEKLSNPEVRIPEDNSEEVSITEDLPIALRKERR 863
Query: 378 EYTKRPLYPLSHYVSLKNISSNHRKFIVSLNTIAIPKTVFEALSKKAWRDAMKEEMIALE 199
K YP+S YV N+S HR FI +++ IP ++ EA+ + W AMKEEM ALE
Sbjct: 864 SCAK---YPISQYVCTNNLSDKHRSFIAAIDATEIPTSIQEAMKLEHWTQAMKEEMNALE 920
Query: 198 KK*NKTWDC*KTKREKHC--CKWIFTLKYKADGTLEWYKA*LVAKGYTQ 58
K N TW+ R+K C+WIFT+K+KADGT+E YKA LVAKGYTQ
Sbjct: 921 K--NSTWEIVDKPRDKKAVGCRWIFTVKHKADGTIERYKARLVAKGYTQ 967
Score = 87.0 bits (214), Expect = 5e-14
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 9/132 (6%)
Frame = -1
Query: 1607 IWLYHLHFVYSCFRVLKVMFPNLFKGLDFSKIHCEICELAKHTSVSFPISNERSSQPFHL 1428
IWL+H + F ++K +FP+LF +C+IC+L+KH S+PISN++S PF L
Sbjct: 470 IWLHHKRLGHPSFNIIKSLFPHLFTKESVESFNCDICQLSKHHRASYPISNKKSVSPFDL 529
Query: 1427 IY---------SILGSSTNLTFLGHGDSCLIDYCTRVIWIFLLKQQSDVSTIIPYFHLLI 1275
I+ SI G+ +TF ID CTRV W +L+K +S+V I F L+
Sbjct: 530 IHSDVWGLVVESISGAKWFVTF--------IDDCTRVTWTYLMKNKSEVFQIFVKFFRLV 581
Query: 1274 KTNLGLK*RGLR 1239
+ G + +R
Sbjct: 582 QNQFGKNIKRIR 593