BLASTX nr result
ID: Cheilocostus21_contig00046287
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00046287
(1163 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAW30012.1| polyprotein, partial [Citrus yellow mosaic virus] 181 6e-50
gb|ACH86211.1| unknown [Citrus yellow mosaic virus] 188 5e-49
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus] 187 1e-48
ref|NP_569153.1| unknown [Citrus yellow mosaic virus] >gi|164169... 187 1e-48
gb|ATZ69472.1| ORF3 polyprotein [Cacao swollen shoot Ghana K virus] 187 1e-48
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus] 187 1e-48
gb|AER00538.1| ORF III [Citrus yellow mosaic virus] 186 3e-48
gb|ATZ69445.1| ORF3 polyprotein [Cacao swollen shoot Togo A virus] 186 4e-48
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus] 185 6e-48
emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao s... 185 8e-48
gb|AER00544.1| ORF III [Citrus yellow mosaic virus] 184 1e-47
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1] 184 2e-47
gb|ASG91844.1| polyprotein [Cacao swollen shoot virus] 184 2e-47
gb|AIK01820.1| ORF3 [Piper yellow mottle virus] 183 4e-47
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus] 182 5e-47
gb|ATZ69463.1| ORF3 polyprotein [Cacao swollen shoot CE virus] 182 7e-47
gb|ASG91836.1| polyprotein [Cacao swollen shoot virus] 182 7e-47
gb|ASG91864.1| polyprotein [Cacao swollen shoot virus] 182 7e-47
gb|ASG91886.1| polyprotein [Cacao swollen shoot virus] 182 7e-47
gb|ASG91880.1| polyprotein [Cacao swollen shoot virus] 182 7e-47
>gb|AAW30012.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 357
Score = 181 bits (459), Expect = 6e-50
Identities = 80/115 (69%), Positives = 103/115 (89%)
Frame = -1
Query: 980 LLSELKGQGYIGENPLRYWSKNQIKCFLDIKNPDLIIEDKPLKHLTPQNKEAFTRHIQAL 801
L+ ELK QGYIGE P++YW+KN++ C LDIKN D++IED+PLKH+TPQ +E+F +H++AL
Sbjct: 153 LIQELKAQGYIGEEPMKYWAKNKVVCHLDIKNSDMVIEDRPLKHVTPQMEESFRKHVEAL 212
Query: 800 LTIGVIRPSKSRHRTTAIIVNSGTTIDPVSKQEIKGKERMVFNYKRLNDNTNKDR 636
L IG IRPSKSRHRTTAI+V+SGT+IDP++ +E+KGKERMVFNYKRLND TNKD+
Sbjct: 213 LKIGAIRPSKSRHRTTAIMVSSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQ 267
>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
Length = 1490
Score = 188 bits (478), Expect = 5e-49
Identities = 84/115 (73%), Positives = 104/115 (90%)
Frame = -1
Query: 980 LLSELKGQGYIGENPLRYWSKNQIKCFLDIKNPDLIIEDKPLKHLTPQNKEAFTRHIQAL 801
L+ ELK QGYIGE P++YW+KN++ C LDIKNPD++IED+PLKH+TPQ +E+F RH++AL
Sbjct: 867 LIQELKAQGYIGEEPMKYWAKNRVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRRHVEAL 926
Query: 800 LTIGVIRPSKSRHRTTAIIVNSGTTIDPVSKQEIKGKERMVFNYKRLNDNTNKDR 636
L IG IRPSKSRHRTTAIIVNSGT+IDP++ +E+KGKERMVFNYKRLND TNKD+
Sbjct: 927 LKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQ 981
Score = 63.5 bits (153), Expect = 5e-07
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = -3
Query: 453 NKPSRVRWLSFVDYITGSGVEINFEHIEGRNNQLADXXXXXXXXXXXSEWPAENQL-IYL 277
NKPSRVRW++F D++TG G+ +N EHI+G+NN LAD +E +++ L
Sbjct: 1299 NKPSRVRWIAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDL 1358
Query: 276 ENLAAALQEVEDHP 235
L AALQE ++ P
Sbjct: 1359 GKLEAALQEKKEAP 1372
Score = 60.8 bits (146), Expect = 3e-06
Identities = 25/48 (52%), Positives = 40/48 (83%)
Frame = -1
Query: 1142 IKKFYDDYLSLSAKTGRLFTGTELSEKLWSKILGDLGKRIRQAFHEKY 999
I ++ +D++ ++AKTGR+F G ELSEKLW K+ GDLG+R+++A+ EK+
Sbjct: 303 IVQYLNDFMRIAAKTGRMFIGPELSEKLWLKMPGDLGQRMKKAYEEKH 350
>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
Length = 1968
Score = 187 bits (476), Expect = 1e-48
Identities = 83/115 (72%), Positives = 104/115 (90%)
Frame = -1
Query: 980 LLSELKGQGYIGENPLRYWSKNQIKCFLDIKNPDLIIEDKPLKHLTPQNKEAFTRHIQAL 801
L+ +LK QGYIGE P++YW+KNQ+ C LDIKNPD++IED+PLKH+TPQ +E+F +H++AL
Sbjct: 1345 LIQDLKAQGYIGEEPMKYWAKNQVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRKHVEAL 1404
Query: 800 LTIGVIRPSKSRHRTTAIIVNSGTTIDPVSKQEIKGKERMVFNYKRLNDNTNKDR 636
L IG IRPSKSRHRTTAIIVNSGT+IDP++ +E+KGKERMVFNYKRLND TNKD+
Sbjct: 1405 LKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQ 1459
Score = 63.5 bits (153), Expect = 5e-07
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = -3
Query: 453 NKPSRVRWLSFVDYITGSGVEINFEHIEGRNNQLADXXXXXXXXXXXSEWPAENQL-IYL 277
NKPSRVRW++F D++TG G+ +N EHI+G+NN LAD +E +++ L
Sbjct: 1777 NKPSRVRWIAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDL 1836
Query: 276 ENLAAALQEVEDHP 235
L AALQE ++ P
Sbjct: 1837 GRLEAALQEKKEAP 1850
Score = 60.8 bits (146), Expect = 4e-06
Identities = 25/48 (52%), Positives = 40/48 (83%)
Frame = -1
Query: 1142 IKKFYDDYLSLSAKTGRLFTGTELSEKLWSKILGDLGKRIRQAFHEKY 999
I ++ +D++ ++AKTGR+F G ELSEKLW K+ GDLG+R+++A+ EK+
Sbjct: 780 IVQYLNDFMRIAAKTGRMFIGPELSEKLWLKMPGDLGQRMKKAYEEKH 827
>ref|NP_569153.1| unknown [Citrus yellow mosaic virus]
gb|AAL18495.1|AF347695_3 unknown [Citrus yellow mosaic virus]
Length = 1983
Score = 187 bits (476), Expect = 1e-48
Identities = 83/115 (72%), Positives = 104/115 (90%)
Frame = -1
Query: 980 LLSELKGQGYIGENPLRYWSKNQIKCFLDIKNPDLIIEDKPLKHLTPQNKEAFTRHIQAL 801
L+ +LK QGYIGE P++YW+KNQ+ C LDIKNPD++IED+PLKH+TPQ +E+F +H++AL
Sbjct: 1360 LIQDLKAQGYIGEEPMKYWAKNQVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRKHVEAL 1419
Query: 800 LTIGVIRPSKSRHRTTAIIVNSGTTIDPVSKQEIKGKERMVFNYKRLNDNTNKDR 636
L IG IRPSKSRHRTTAIIVNSGT+IDP++ +E+KGKERMVFNYKRLND TNKD+
Sbjct: 1420 LKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQ 1474
Score = 63.5 bits (153), Expect = 5e-07
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = -3
Query: 453 NKPSRVRWLSFVDYITGSGVEINFEHIEGRNNQLADXXXXXXXXXXXSEWPAENQL-IYL 277
NKPSRVRW++F D++TG G+ +N EHI+G+NN LAD +E +++ L
Sbjct: 1792 NKPSRVRWIAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDL 1851
Query: 276 ENLAAALQEVEDHP 235
L AALQE ++ P
Sbjct: 1852 GKLEAALQEKKEAP 1865
Score = 60.8 bits (146), Expect = 4e-06
Identities = 25/48 (52%), Positives = 40/48 (83%)
Frame = -1
Query: 1142 IKKFYDDYLSLSAKTGRLFTGTELSEKLWSKILGDLGKRIRQAFHEKY 999
I ++ +D++ ++AKTGR+F G ELSEKLW K+ GDLG+R+++A+ EK+
Sbjct: 795 IVQYLNDFMRIAAKTGRMFIGPELSEKLWLKMPGDLGQRMKKAYEEKH 842
>gb|ATZ69472.1| ORF3 polyprotein [Cacao swollen shoot Ghana K virus]
Length = 1881
Score = 187 bits (475), Expect = 1e-48
Identities = 88/128 (68%), Positives = 106/128 (82%)
Frame = -1
Query: 1019 QAFHEKYLTTIQPLLSELKGQGYIGENPLRYWSKNQIKCFLDIKNPDLIIEDKPLKHLTP 840
Q+ +K +Q LL +LK QGYIGENPL+YW+ N+I C LDIKNPDLIIEDKP+KHLTP
Sbjct: 1270 QSHQQKLSPALQELLVQLKQQGYIGENPLKYWANNKILCQLDIKNPDLIIEDKPIKHLTP 1329
Query: 839 QNKEAFTRHIQALLTIGVIRPSKSRHRTTAIIVNSGTTIDPVSKQEIKGKERMVFNYKRL 660
++ F +H++ALL IGVIRPSKS+HRTTA IV SGT+IDP++KQ I GKERMVFNYKRL
Sbjct: 1330 AMEQKFQKHVKALLDIGVIRPSKSKHRTTAFIVESGTSIDPITKQAIHGKERMVFNYKRL 1389
Query: 659 NDNTNKDR 636
NDNT KD+
Sbjct: 1390 NDNTEKDQ 1397
>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
Length = 1967
Score = 187 bits (475), Expect = 1e-48
Identities = 83/115 (72%), Positives = 104/115 (90%)
Frame = -1
Query: 980 LLSELKGQGYIGENPLRYWSKNQIKCFLDIKNPDLIIEDKPLKHLTPQNKEAFTRHIQAL 801
L+ ELK QGYIGE P++YW+KN++ C LDIKNPD++IED+PLKH+TPQ +E+F +H++AL
Sbjct: 1344 LIQELKAQGYIGEEPMKYWAKNKVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRKHVEAL 1403
Query: 800 LTIGVIRPSKSRHRTTAIIVNSGTTIDPVSKQEIKGKERMVFNYKRLNDNTNKDR 636
L IG IRPSKSRHRTTAIIVNSGT+IDP++ +E+KGKERMVFNYKRLND TNKD+
Sbjct: 1404 LKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQ 1458
Score = 64.3 bits (155), Expect = 3e-07
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Frame = -3
Query: 453 NKPSRVRWLSFVDYITGSGVEINFEHIEGRNNQLADXXXXXXXXXXXSEWPAENQL-IYL 277
NKPSRVRW++F D++TG G+ +N EHI+G+NN LAD +E +++ L
Sbjct: 1776 NKPSRVRWIAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDL 1835
Query: 276 ENLAAALQEVEDHPTQAVLQQLQQTMEIMEPLLLPTIRNWTSSSEDKRTSSVWMKKMPLK 97
L AALQE ++ P + + + + + L T S RT S K P+K
Sbjct: 1836 GKLEAALQEKKEAPQAMHAEYVSLLTKSADRITLSLCS--TRGSSLSRTYSCRPGKEPMK 1893
Score = 59.7 bits (143), Expect = 8e-06
Identities = 25/48 (52%), Positives = 39/48 (81%)
Frame = -1
Query: 1142 IKKFYDDYLSLSAKTGRLFTGTELSEKLWSKILGDLGKRIRQAFHEKY 999
I ++ +D++ ++AKTGR F G ELSEKLW K+ GDLG+R+++A+ EK+
Sbjct: 779 IVQYLNDFMRIAAKTGRTFIGPELSEKLWLKMPGDLGQRMKKAYEEKH 826
>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
Length = 1982
Score = 186 bits (472), Expect = 3e-48
Identities = 82/115 (71%), Positives = 103/115 (89%)
Frame = -1
Query: 980 LLSELKGQGYIGENPLRYWSKNQIKCFLDIKNPDLIIEDKPLKHLTPQNKEAFTRHIQAL 801
L+ +LK QGYIGE P++YW+KNQ+ C LDIKNPD++IED+PLKH+TPQ +E+F +H++AL
Sbjct: 1359 LIQDLKAQGYIGEEPMKYWAKNQVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRKHVEAL 1418
Query: 800 LTIGVIRPSKSRHRTTAIIVNSGTTIDPVSKQEIKGKERMVFNYKRLNDNTNKDR 636
L IG IRPSKSRHRTTAII NSGT+IDP++ +E+KGKERMVFNYKRLND TNKD+
Sbjct: 1419 LKIGAIRPSKSRHRTTAIIANSGTSIDPITGKEVKGKERMVFNYKRLNDLTNKDQ 1473
Score = 63.5 bits (153), Expect = 5e-07
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = -3
Query: 453 NKPSRVRWLSFVDYITGSGVEINFEHIEGRNNQLADXXXXXXXXXXXSEWPAENQL-IYL 277
NKPSRVRW++F D++TG G+ +N EHI+G+NN LAD +E +++ L
Sbjct: 1791 NKPSRVRWIAFTDFLTGLGIPVNIEHIDGKNNHLADALSRLVTGFVFAEPQCQDKFQDDL 1850
Query: 276 ENLAAALQEVEDHP 235
L AALQE ++ P
Sbjct: 1851 GKLEAALQEKKEAP 1864
Score = 60.8 bits (146), Expect = 4e-06
Identities = 25/48 (52%), Positives = 40/48 (83%)
Frame = -1
Query: 1142 IKKFYDDYLSLSAKTGRLFTGTELSEKLWSKILGDLGKRIRQAFHEKY 999
I ++ +D++ ++AKTGR+F G ELSEKLW K+ GDLG+R+++A+ EK+
Sbjct: 794 IVQYLNDFMRIAAKTGRMFIGPELSEKLWLKMPGDLGQRMKKAYEEKH 841
>gb|ATZ69445.1| ORF3 polyprotein [Cacao swollen shoot Togo A virus]
Length = 1862
Score = 186 bits (471), Expect = 4e-48
Identities = 86/130 (66%), Positives = 108/130 (83%)
Frame = -1
Query: 1025 IRQAFHEKYLTTIQPLLSELKGQGYIGENPLRYWSKNQIKCFLDIKNPDLIIEDKPLKHL 846
+ Q K T +Q LL++LK QG+IG+NP+++W+ N+I C LDIKNPDL+IEDKP+KHL
Sbjct: 1271 VAQTQQTKLSTELQQLLAQLKEQGFIGDNPMKHWAANKILCKLDIKNPDLVIEDKPIKHL 1330
Query: 845 TPQNKEAFTRHIQALLTIGVIRPSKSRHRTTAIIVNSGTTIDPVSKQEIKGKERMVFNYK 666
TP ++ F+RH+QALL IGVIRPSKS+HRTTA IV SGTTIDPV+K+ + GKERMVFNYK
Sbjct: 1331 TPAMEKQFSRHVQALLDIGVIRPSKSKHRTTAFIVESGTTIDPVTKKTVHGKERMVFNYK 1390
Query: 665 RLNDNTNKDR 636
RLNDNT KD+
Sbjct: 1391 RLNDNTEKDQ 1400
>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
Length = 1976
Score = 185 bits (470), Expect = 6e-48
Identities = 83/115 (72%), Positives = 103/115 (89%)
Frame = -1
Query: 980 LLSELKGQGYIGENPLRYWSKNQIKCFLDIKNPDLIIEDKPLKHLTPQNKEAFTRHIQAL 801
L+ ELK QGYIGE P++YW+KNQ+ C LDIKNPD++IED+PLKH+TPQ + +F +H++AL
Sbjct: 1352 LIQELKAQGYIGEEPMKYWAKNQVVCHLDIKNPDMVIEDRPLKHVTPQMEGSFRKHVEAL 1411
Query: 800 LTIGVIRPSKSRHRTTAIIVNSGTTIDPVSKQEIKGKERMVFNYKRLNDNTNKDR 636
L IG IRPSKSRHRTTAIIVNSGT+IDP++ +E+KGKERMVFNYKRLND TNKD+
Sbjct: 1412 LKIGAIRPSKSRHRTTAIIVNSGTSIDPLTGKEVKGKERMVFNYKRLNDLTNKDQ 1466
Score = 60.8 bits (146), Expect = 4e-06
Identities = 25/48 (52%), Positives = 40/48 (83%)
Frame = -1
Query: 1142 IKKFYDDYLSLSAKTGRLFTGTELSEKLWSKILGDLGKRIRQAFHEKY 999
I ++ +D++ ++AKTGR+F G ELSEKLW K+ GDLG+R+++A+ EK+
Sbjct: 787 IVQYLNDFMRIAAKTGRMFIGPELSEKLWLKMPGDLGQRMKKAYEEKH 834
Score = 60.8 bits (146), Expect = 4e-06
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = -3
Query: 453 NKPSRVRWLSFVDYITGSGVEINFEHIEGRNNQLAD 346
NKPSRVRW++F D++TG G+ +N EHI+G+NN LAD
Sbjct: 1785 NKPSRVRWIAFTDFLTGLGIPVNIEHIDGKNNHLAD 1820
>emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao swollen shoot Togo A
virus]
Length = 1868
Score = 185 bits (469), Expect = 8e-48
Identities = 86/123 (69%), Positives = 105/123 (85%)
Frame = -1
Query: 1004 KYLTTIQPLLSELKGQGYIGENPLRYWSKNQIKCFLDIKNPDLIIEDKPLKHLTPQNKEA 825
K T +Q LL++LK QG+IGENP+++W+ N+I C LDIKNPDL+IEDKP+KHLTP ++
Sbjct: 1279 KLSTKLQKLLAQLKEQGFIGENPMKHWAANKILCKLDIKNPDLVIEDKPIKHLTPAMEKQ 1338
Query: 824 FTRHIQALLTIGVIRPSKSRHRTTAIIVNSGTTIDPVSKQEIKGKERMVFNYKRLNDNTN 645
F RH+QALL IGVIRPSKS+HRTTA IV SGTTIDPV+K+ + GKERMVFNYKRLNDNT
Sbjct: 1339 FKRHVQALLDIGVIRPSKSKHRTTAFIVESGTTIDPVTKKTVHGKERMVFNYKRLNDNTE 1398
Query: 644 KDR 636
KD+
Sbjct: 1399 KDQ 1401
>gb|AER00544.1| ORF III [Citrus yellow mosaic virus]
Length = 1976
Score = 184 bits (468), Expect = 1e-47
Identities = 86/126 (68%), Positives = 106/126 (84%)
Frame = -1
Query: 1013 FHEKYLTTIQPLLSELKGQGYIGENPLRYWSKNQIKCFLDIKNPDLIIEDKPLKHLTPQN 834
F +K+ IQ ELK QGYIGE P++YW+ Q+ C LDIKNPD++IED+PLKH+TPQ
Sbjct: 1345 FQQKFAGIIQ----ELKAQGYIGEEPMKYWTIKQVVCHLDIKNPDMVIEDRPLKHVTPQM 1400
Query: 833 KEAFTRHIQALLTIGVIRPSKSRHRTTAIIVNSGTTIDPVSKQEIKGKERMVFNYKRLND 654
+E+F RH++ALL IG IRPSKSRHRTTAIIVNSGT+IDP++ +E+KGKERMVFNYKRLND
Sbjct: 1401 EESFRRHVEALLKIGAIRPSKSRHRTTAIIVNSGTSIDPITGKEVKGKERMVFNYKRLND 1460
Query: 653 NTNKDR 636
TNKD+
Sbjct: 1461 LTNKDQ 1466
Score = 60.8 bits (146), Expect = 4e-06
Identities = 25/48 (52%), Positives = 40/48 (83%)
Frame = -1
Query: 1142 IKKFYDDYLSLSAKTGRLFTGTELSEKLWSKILGDLGKRIRQAFHEKY 999
I ++ +D++ ++AKTGR+F G ELSEKLW K+ GDLG+R+++A+ EK+
Sbjct: 787 IVQYLNDFMRIAAKTGRMFIGPELSEKLWLKMPGDLGQRMKKAYEEKH 834
>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
Length = 1846
Score = 184 bits (467), Expect = 2e-47
Identities = 93/163 (57%), Positives = 117/163 (71%), Gaps = 3/163 (1%)
Frame = -1
Query: 1115 SLSAKTGRLFTGTELSEKLWS---KILGDLGKRIRQAFHEKYLTTIQPLLSELKGQGYIG 945
S S + R+ E+LW + ++GK E +L + L+++LK GYIG
Sbjct: 1188 SQSTEIARMLQEDVDDEELWQIQEAVYINIGKS-----RESFLKRFEALINQLKEAGYIG 1242
Query: 944 ENPLRYWSKNQIKCFLDIKNPDLIIEDKPLKHLTPQNKEAFTRHIQALLTIGVIRPSKSR 765
ENPL++W KN++ C LDIKNPD IIEDKPLKHLTP KE+F RH +ALL +GVIRPSKSR
Sbjct: 1243 ENPLQHWEKNRVVCQLDIKNPDFIIEDKPLKHLTPSMKESFRRHTEALLKLGVIRPSKSR 1302
Query: 764 HRTTAIIVNSGTTIDPVSKQEIKGKERMVFNYKRLNDNTNKDR 636
HRTTA+IV SGT +DPV+ +E +GKERMVFNYKRLND TNKD+
Sbjct: 1303 HRTTAMIVQSGTAVDPVTGKETRGKERMVFNYKRLNDLTNKDQ 1345
Score = 78.6 bits (192), Expect = 7e-12
Identities = 42/86 (48%), Positives = 51/86 (59%)
Frame = -3
Query: 456 QNKPSRVRWLSFVDYITGSGVEINFEHIEGRNNQLADXXXXXXXXXXXSEWPAENQLIYL 277
QNKPSRVRWLSF DYITG GV INFEHIEG++N LAD W + L
Sbjct: 1662 QNKPSRVRWLSFTDYITGVGVPINFEHIEGKDNLLADNLSRLVSTLCLG-WSTPEKEQQL 1720
Query: 276 ENLAAALQEVEDHPTQAVLQQLQQTM 199
+ L A++EV P + + QL QT+
Sbjct: 1721 QFLETAMEEVRQKPNKDISLQLNQTI 1746
>gb|ASG91844.1| polyprotein [Cacao swollen shoot virus]
Length = 1871
Score = 184 bits (466), Expect = 2e-47
Identities = 86/125 (68%), Positives = 103/125 (82%)
Frame = -1
Query: 1010 HEKYLTTIQPLLSELKGQGYIGENPLRYWSKNQIKCFLDIKNPDLIIEDKPLKHLTPQNK 831
H +Q L+ +LK QGYIGENPL+YW+ N+I C LDIKNP+LIIEDKP+KHLTP +
Sbjct: 1280 HHTLSPEVQDLIEKLKMQGYIGENPLKYWANNKILCHLDIKNPELIIEDKPIKHLTPVME 1339
Query: 830 EAFTRHIQALLTIGVIRPSKSRHRTTAIIVNSGTTIDPVSKQEIKGKERMVFNYKRLNDN 651
+ F +H+QALL IGVIRPSKS+HRTTA IV SGT+IDPV+K+ I GKERMVFNYKRLNDN
Sbjct: 1340 QKFKKHVQALLDIGVIRPSKSKHRTTAFIVESGTSIDPVTKRAIHGKERMVFNYKRLNDN 1399
Query: 650 TNKDR 636
T KD+
Sbjct: 1400 TEKDQ 1404
>gb|AIK01820.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 183 bits (464), Expect = 4e-47
Identities = 95/169 (56%), Positives = 120/169 (71%), Gaps = 3/169 (1%)
Frame = -1
Query: 1133 FYDDYLSLSAKTGRLFTGTE-LSEKLWSKILGDL--GKRIRQAFHEKYLTTIQPLLSELK 963
FY + A+ G TE +SE+ + ++ G I F KY Q L+ ++K
Sbjct: 1301 FYKYVTKIMAQQGNAMVRTEVISEEEEYSAVEEVCTGTVIHPEFGNKY----QKLIEDMK 1356
Query: 962 GQGYIGENPLRYWSKNQIKCFLDIKNPDLIIEDKPLKHLTPQNKEAFTRHIQALLTIGVI 783
QGYIGE+P++YW KNQ+ C L+IKNPDLIIED+PLKH+TP +F +HI ALL I VI
Sbjct: 1357 NQGYIGEDPMKYWQKNQVTCKLEIKNPDLIIEDRPLKHVTPAMHASFLKHIDALLKIKVI 1416
Query: 782 RPSKSRHRTTAIIVNSGTTIDPVSKQEIKGKERMVFNYKRLNDNTNKDR 636
RPSKSRHRT A IVNSGT+IDPV+ +E+KGKER+VFNYKRLNDNTNKD+
Sbjct: 1417 RPSKSRHRTCAFIVNSGTSIDPVTGKEVKGKERLVFNYKRLNDNTNKDQ 1465
Score = 66.6 bits (161), Expect = 5e-08
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = -1
Query: 1133 FYDDYLSLSAKTGRLFTGTELSEKLWSKILGDLGKRIRQAFHEKY 999
F +DYL L+AKTGR+F GTELSEKLW K+ G+LG+RI++AF KY
Sbjct: 766 FLNDYLRLAAKTGRMFIGTELSEKLWMKLPGNLGRRIKEAFDIKY 810
Score = 62.8 bits (151), Expect = 9e-07
Identities = 37/110 (33%), Positives = 53/110 (48%)
Frame = -3
Query: 453 NKPSRVRWLSFVDYITGSGVEINFEHIEGRNNQLADXXXXXXXXXXXSEWPAENQLIYLE 274
NKPSRVRW+ F DYITG G+++ F+HI+G+ N LAD +W +I
Sbjct: 1783 NKPSRVRWIGFTDYITGLGIDVKFQHIDGKENSLAD-SLSRLTCSLIRQWHHLEPVI--T 1839
Query: 273 NLAAALQEVEDHPTQAVLQQLQQTMEIMEPLLLPTIRNWTSSSEDKRTSS 124
+ AAL + +PT + L+Q L W SS+ + S
Sbjct: 1840 TMEAALVQERQNPTPGSTRALKQA--------LHQANQWLSSTNSTKMPS 1881
>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
Length = 1979
Score = 182 bits (463), Expect = 5e-47
Identities = 82/115 (71%), Positives = 103/115 (89%)
Frame = -1
Query: 980 LLSELKGQGYIGENPLRYWSKNQIKCFLDIKNPDLIIEDKPLKHLTPQNKEAFTRHIQAL 801
L+ ELK QGYIGE P++YW+KNQ+ C LDIKNPD++IED+PLKH+TPQ +E+F +H++AL
Sbjct: 1354 LIQELKAQGYIGEEPMKYWAKNQVVCHLDIKNPDMVIEDRPLKHVTPQMEESFRKHVEAL 1413
Query: 800 LTIGVIRPSKSRHRTTAIIVNSGTTIDPVSKQEIKGKERMVFNYKRLNDNTNKDR 636
L IG IRPSKSRHRTTAIIVNSGT+I+P++ +E+KGKERMVF YKRLND TNKD+
Sbjct: 1414 LKIGAIRPSKSRHRTTAIIVNSGTSINPLTGKEVKGKERMVFIYKRLNDLTNKDQ 1468
Score = 60.8 bits (146), Expect = 4e-06
Identities = 25/48 (52%), Positives = 40/48 (83%)
Frame = -1
Query: 1142 IKKFYDDYLSLSAKTGRLFTGTELSEKLWSKILGDLGKRIRQAFHEKY 999
I ++ +D++ ++AKTGR+F G ELSEKLW K+ GDLG+R+++A+ EK+
Sbjct: 787 IVQYLNDFMRIAAKTGRMFIGPELSEKLWLKMPGDLGQRMKKAYEEKH 834
Score = 60.8 bits (146), Expect = 4e-06
Identities = 23/36 (63%), Positives = 31/36 (86%)
Frame = -3
Query: 453 NKPSRVRWLSFVDYITGSGVEINFEHIEGRNNQLAD 346
NKPSRVRW++F D++TG G+ +N EHI+G+NN LAD
Sbjct: 1788 NKPSRVRWIAFTDFLTGLGIPVNIEHIDGKNNHLAD 1823
>gb|ATZ69463.1| ORF3 polyprotein [Cacao swollen shoot CE virus]
Length = 1822
Score = 182 bits (462), Expect = 7e-47
Identities = 86/125 (68%), Positives = 103/125 (82%)
Frame = -1
Query: 1010 HEKYLTTIQPLLSELKGQGYIGENPLRYWSKNQIKCFLDIKNPDLIIEDKPLKHLTPQNK 831
H +Q LL +LK QGYIGENPL+YW+ N+I C LDIKNP+LIIEDKP+KHLTP +
Sbjct: 1214 HHSLSPDLQDLLQKLKMQGYIGENPLKYWANNKILCHLDIKNPNLIIEDKPIKHLTPLME 1273
Query: 830 EAFTRHIQALLTIGVIRPSKSRHRTTAIIVNSGTTIDPVSKQEIKGKERMVFNYKRLNDN 651
+ F +HI+ALL IGVIRPSKS+HRTTA +V SGT+IDPV+K+ I GKERMVFNYKRLNDN
Sbjct: 1274 QKFQKHIKALLDIGVIRPSKSKHRTTAFLVESGTSIDPVTKKTIHGKERMVFNYKRLNDN 1333
Query: 650 TNKDR 636
T KD+
Sbjct: 1334 TEKDQ 1338
>gb|ASG91836.1| polyprotein [Cacao swollen shoot virus]
Length = 1841
Score = 182 bits (462), Expect = 7e-47
Identities = 86/125 (68%), Positives = 103/125 (82%)
Frame = -1
Query: 1010 HEKYLTTIQPLLSELKGQGYIGENPLRYWSKNQIKCFLDIKNPDLIIEDKPLKHLTPQNK 831
H +Q LL +LK QGYIGENPL+YW+ N+I C LDIKNP+LIIEDKP+KHLTP +
Sbjct: 1232 HHNLSPDLQDLLQKLKMQGYIGENPLKYWANNKILCHLDIKNPNLIIEDKPIKHLTPLME 1291
Query: 830 EAFTRHIQALLTIGVIRPSKSRHRTTAIIVNSGTTIDPVSKQEIKGKERMVFNYKRLNDN 651
+ F +HI+ALL IGVIRPSKS+HRTTA +V SGT+IDPV+K+ I GKERMVFNYKRLNDN
Sbjct: 1292 QKFQKHIKALLEIGVIRPSKSKHRTTAFLVESGTSIDPVTKKTIHGKERMVFNYKRLNDN 1351
Query: 650 TNKDR 636
T KD+
Sbjct: 1352 TEKDQ 1356
>gb|ASG91864.1| polyprotein [Cacao swollen shoot virus]
Length = 1845
Score = 182 bits (462), Expect = 7e-47
Identities = 91/156 (58%), Positives = 117/156 (75%), Gaps = 1/156 (0%)
Frame = -1
Query: 1100 TGRLFTGTELSEKLWSKILGDLGKRIR-QAFHEKYLTTIQPLLSELKGQGYIGENPLRYW 924
T +F E +E+ S++ + + QA +K +Q L+ LK QG+IGENP+++W
Sbjct: 1209 TEPIFETEEETEEFDSEVHQQIVSHVAAQAQQQKLDPKLQQLMERLKDQGFIGENPMQHW 1268
Query: 923 SKNQIKCFLDIKNPDLIIEDKPLKHLTPQNKEAFTRHIQALLTIGVIRPSKSRHRTTAII 744
+KN+I C LDIKNPDLIIEDKP+KHLTP ++ F +H++ALL IGVIRPSKS+HRTTA I
Sbjct: 1269 AKNKILCRLDIKNPDLIIEDKPIKHLTPAMEKQFQKHVKALLDIGVIRPSKSKHRTTAFI 1328
Query: 743 VNSGTTIDPVSKQEIKGKERMVFNYKRLNDNTNKDR 636
V SGT IDPV+K+ I GKERMVFNYKRLNDNT KD+
Sbjct: 1329 VESGTVIDPVTKKTIHGKERMVFNYKRLNDNTEKDQ 1364
>gb|ASG91886.1| polyprotein [Cacao swollen shoot virus]
Length = 1847
Score = 182 bits (462), Expect = 7e-47
Identities = 91/156 (58%), Positives = 117/156 (75%), Gaps = 1/156 (0%)
Frame = -1
Query: 1100 TGRLFTGTELSEKLWSKILGDLGKRIR-QAFHEKYLTTIQPLLSELKGQGYIGENPLRYW 924
T +F E +E+ S++ + + QA +K +Q L+ LK QG+IGENP+++W
Sbjct: 1211 TEPIFETEEETEEFDSEVHQQIVSHVAAQAQQQKLDPKLQQLMERLKDQGFIGENPMQHW 1270
Query: 923 SKNQIKCFLDIKNPDLIIEDKPLKHLTPQNKEAFTRHIQALLTIGVIRPSKSRHRTTAII 744
+KN+I C LDIKNPDLIIEDKP+KHLTP ++ F +H++ALL IGVIRPSKS+HRTTA I
Sbjct: 1271 AKNKILCRLDIKNPDLIIEDKPIKHLTPAMEKQFLKHVKALLDIGVIRPSKSKHRTTAFI 1330
Query: 743 VNSGTTIDPVSKQEIKGKERMVFNYKRLNDNTNKDR 636
V SGT IDPV+K+ I GKERMVFNYKRLNDNT KD+
Sbjct: 1331 VESGTVIDPVTKKTIHGKERMVFNYKRLNDNTEKDQ 1366
>gb|ASG91880.1| polyprotein [Cacao swollen shoot virus]
Length = 1847
Score = 182 bits (462), Expect = 7e-47
Identities = 91/156 (58%), Positives = 117/156 (75%), Gaps = 1/156 (0%)
Frame = -1
Query: 1100 TGRLFTGTELSEKLWSKILGDLGKRIR-QAFHEKYLTTIQPLLSELKGQGYIGENPLRYW 924
T +F E +E+ S++ + + QA +K +Q L+ LK QG+IGENP+++W
Sbjct: 1211 TEPIFETEEETEEFDSEVHQQIVSHVAAQAQQQKLDPKLQQLMERLKDQGFIGENPMQHW 1270
Query: 923 SKNQIKCFLDIKNPDLIIEDKPLKHLTPQNKEAFTRHIQALLTIGVIRPSKSRHRTTAII 744
+KN+I C LDIKNPDLIIEDKP+KHLTP ++ F +H++ALL IGVIRPSKS+HRTTA I
Sbjct: 1271 AKNKILCRLDIKNPDLIIEDKPIKHLTPAMEKQFQKHVKALLDIGVIRPSKSKHRTTAFI 1330
Query: 743 VNSGTTIDPVSKQEIKGKERMVFNYKRLNDNTNKDR 636
V SGT IDPV+K+ I GKERMVFNYKRLNDNT KD+
Sbjct: 1331 VESGTVIDPVTKKTIHGKERMVFNYKRLNDNTEKDQ 1366