BLASTX nr result

ID: Cheilocostus21_contig00045942 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00045942
         (560 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009412230.1| PREDICTED: zinc finger CCCH domain-containin...    91   1e-17

>ref|XP_009412230.1| PREDICTED: zinc finger CCCH domain-containing protein 65 [Musa
           acuminata subsp. malaccensis]
          Length = 816

 Score = 90.5 bits (223), Expect = 1e-17
 Identities = 65/189 (34%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
 Frame = -1

Query: 551 LSLNELLKLKPQE-MSNTTNELTVEHQHKXXXXXXXXXXXXXXDKNLLNALMNSDSDEEV 375
           LS NE +  KPQ+ +S + NE   +HQ +               ++L +AL++ ++ EE+
Sbjct: 318 LSPNEQMLFKPQKNVSKSINETAEKHQQELLGFSMKQLE-----EDLADALVDPNNVEEI 372

Query: 374 EEGQIPGDFWNLDESELMVHQSAPLDGQKTEKGSSDTEVINNARHQYSPMPSGTDC---- 207
           EEGQIPGDFW+L+E+   VH +A L  QK ++GS  T+ +              DC    
Sbjct: 373 EEGQIPGDFWSLNETGPGVHHNALLQDQKLDEGSCHTDFLQK---------ESPDCLAKL 423

Query: 206 SSENILLREINLPKNYRLAETDGK-DGDGHLSLDVRQGNTERENICSNAPKMNVELQADD 30
           S +NI+ R   L ++    E + K DG+ +LS D R    E +  CSN P M  E Q   
Sbjct: 424 SGKNIMARNNKLKEDVLFMEINEKMDGNDYLSSDERHSIAEMKKSCSNVPVMYSEQQTTA 483

Query: 29  LHASISREE 3
           ++A  S EE
Sbjct: 484 VNAFGSCEE 492


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