BLASTX nr result

ID: Cheilocostus21_contig00045654 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00045654
         (752 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009417278.1| PREDICTED: H/ACA ribonucleoprotein complex n...    86   2e-15

>ref|XP_009417278.1| PREDICTED: H/ACA ribonucleoprotein complex non-core subunit
           NAF1-like [Musa acuminata subsp. malaccensis]
          Length = 676

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 64/144 (44%), Positives = 78/144 (54%), Gaps = 2/144 (1%)
 Frame = -1

Query: 527 EWFVDIDPFLMSAEEAKVADSGGLDSNKADLSVCAVMPGDPSSEISAIGVKGEFLCSSIG 348
           EW +D D F M  +EAKV D  GLD NK + S   +   D +++ S  G K E LCSSI 
Sbjct: 36  EWLIDPDQFFMLGDEAKVPDPTGLDPNKVE-SAGPLDTDDFATKRSYPGAKEEILCSSID 94

Query: 347 EGIKNVSLVEACDQNPNDVAIFEMVACEHTVHKTDVTCGLVDAN-ATVRSCVDGSDESEV 171
           E ++NVSLVEA D N N+V + E  A E T  K D      +AN A V S   GS E +V
Sbjct: 95  ERMQNVSLVEASDGNANNVTVLEGAASEATA-KIDAG----EANVAMVSSGAGGSKERDV 149

Query: 170 AKEYTELIKDNEVNKT-CVSSLVK 102
           A   T L K N  N+    S LVK
Sbjct: 150 ANGCTALTKANGANEAHAASGLVK 173


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