BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00045522
         (1346 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY13477.1| retrovirus-related Pol polyprotein from transposo...    67   4e-16
gb|PNY13478.1| beta-galactosidase [Trifolium pratense]                 67   4e-16
gb|PNX71168.1| beta-galactosidase [Trifolium pratense]                 64   5e-16
gb|PNX96430.1| retrovirus-related Pol polyprotein from transposo...    65   9e-16
gb|PNX86057.1| beta-galactosidase [Trifolium pratense]                 66   9e-16
gb|PRQ42837.1| putative RNA-directed DNA polymerase [Rosa chinen...    65   2e-15
gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]                       65   2e-15
gb|PRQ55789.1| putative RNA-directed DNA polymerase [Rosa chinen...    65   2e-15
gb|PRQ31964.1| putative RNA-directed DNA polymerase [Rosa chinen...    66   2e-15
ref|XP_021800104.1| uncharacterized protein LOC110744441 [Prunus...    65   3e-15
gb|PRQ35370.1| putative RNA-directed DNA polymerase [Rosa chinen...    65   3e-15
gb|OTF86030.1| putative ribonuclease H-like domain-containing pr...    67   1e-14
gb|PRQ56600.1| putative RNA-directed DNA polymerase [Rosa chinen...    67   1e-14
gb|PNX83829.1| beta-galactosidase [Trifolium pratense]                 65   2e-14
gb|PRQ27705.1| putative linoleate 9S-lipoxygenase [Rosa chinensis]     65   3e-14
dbj|GAU31450.1| hypothetical protein TSUD_72310 [Trifolium subte...    67   4e-14
gb|PRQ31062.1| putative RNA-directed DNA polymerase [Rosa chinen...    62   4e-14
gb|KYP49029.1| Retrovirus-related Pol polyprotein from transposo...    62   5e-14
gb|PRQ60643.1| putative RNA-directed DNA polymerase [Rosa chinen...    61   6e-14
dbj|GAU48207.1| hypothetical protein TSUD_304870 [Trifolium subt...    67   1e-13

>gb|PNY13477.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 1100

 Score = 66.6 bits (161), Expect(2) = 4e-16
 Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
           WD+VT     KT  CR+ +TIK+  +G     KA+L  + YT    VDY ET + +AKLN
Sbjct: 616 WDVVTLPSGKKTVGCRWVFTIKHKADGSVERYKARLVAKGYTQSYGVDYQETFAPVAKLN 675

Query: 169 SVHVIFSLGTNLSWKMFQMYVK 234
           +V ++ SL  N  W + Q  VK
Sbjct: 676 TVRILLSLAANQDWPLLQFDVK 697



 Score = 48.1 bits (113), Expect(2) = 4e-16
 Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
 Frame = +3

Query: 231 KSAFLYCDFIKEVYMEQPS*VCNSGVDV----VCKLKKAIYHFKQSSRA*FQKLLK 386
           K+AFL+ + ++E+YM+ P  + +S +D     VCKLKKA+Y  KQS RA F +  K
Sbjct: 697 KNAFLHGEILEEIYMDSPPGMTDSMIDSNGMKVCKLKKALYGLKQSPRAWFGRFTK 752


>gb|PNY13478.1| beta-galactosidase [Trifolium pratense]
          Length = 498

 Score = 66.6 bits (161), Expect(2) = 4e-16
 Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
           WD+VT     KT  CR+ +TIK+  +G     KA+L  + YT    VDY ET + +AKLN
Sbjct: 14  WDVVTLPSGKKTVGCRWVFTIKHKADGSVERYKARLVAKGYTQSYGVDYQETFAPVAKLN 73

Query: 169 SVHVIFSLGTNLSWKMFQMYVK 234
           +V ++ SL  N  W + Q  VK
Sbjct: 74  TVRILLSLAANQDWPLLQFDVK 95



 Score = 48.1 bits (113), Expect(2) = 4e-16
 Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
 Frame = +3

Query: 231 KSAFLYCDFIKEVYMEQPS*VCNSGVDV----VCKLKKAIYHFKQSSRA*FQKLLK 386
           K+AFL+ + ++E+YM+ P  + +S +D     VCKLKKA+Y  KQS RA F +  K
Sbjct: 95  KNAFLHGEILEEIYMDSPPGMTDSMIDSNGMKVCKLKKALYGLKQSPRAWFGRFTK 150


>gb|PNX71168.1| beta-galactosidase [Trifolium pratense]
          Length = 667

 Score = 64.3 bits (155), Expect(2) = 5e-16
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
           WD+VT     KT  CR+ +TIK+  +G     KA+L  + YT    VDY ET + +AKLN
Sbjct: 187 WDLVTLPRGKKTVGCRWVFTIKHKADGTIDRYKARLVAKGYTQSYGVDYQETFAPVAKLN 246

Query: 169 SVHVIFSLGTNLSWKMFQMYVK 234
           +V ++ S+  N  W + Q  VK
Sbjct: 247 TVRILLSVAANQDWPLLQFDVK 268



 Score = 50.1 bits (118), Expect(2) = 5e-16
 Identities = 24/52 (46%), Positives = 35/52 (67%)
 Frame = +3

Query: 231 KSAFLYCDFIKEVYMEQPS*VCNSGVDVVCKLKKAIYHFKQSSRA*FQKLLK 386
           K+AFL+ + ++E+YM+ P  + +S    VCKLKKA+Y  KQS RA F +  K
Sbjct: 268 KNAFLHGEILEEIYMDTPPGMVDSNGSKVCKLKKALYGLKQSPRAWFGRFTK 319


>gb|PNX96430.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 1101

 Score = 65.5 bits (158), Expect(2) = 9e-16
 Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
           WD+V      KT  C++ +TIK+ P+G     KA+L  + YT    VDY ET + +AKLN
Sbjct: 727 WDLVQLPPGKKTVGCKWVFTIKHKPDGTIERYKARLVAKGYTQSYGVDYQETFAPVAKLN 786

Query: 169 SVHVIFSLGTNLSWKMFQMYVK 234
           +V ++ SL  N +W + Q  VK
Sbjct: 787 TVRILLSLAANQNWPLLQFDVK 808



 Score = 48.1 bits (113), Expect(2) = 9e-16
 Identities = 25/52 (48%), Positives = 34/52 (65%)
 Frame = +3

Query: 231 KSAFLYCDFIKEVYMEQPS*VCNSGVDVVCKLKKAIYHFKQSSRA*FQKLLK 386
           K+AFL+ D I+E+YM+ P    ++    VCKLKKA+Y  KQS RA F +  K
Sbjct: 808 KNAFLHGDIIEEIYMDPPPGTKHTTGMEVCKLKKALYGLKQSPRAWFGRFTK 859


>gb|PNX86057.1| beta-galactosidase [Trifolium pratense]
          Length = 494

 Score = 65.9 bits (159), Expect(2) = 9e-16
 Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
           WD+VT     KT  C++ YTIK+  +G     KA+L  + YT    VDY ET + +AKLN
Sbjct: 14  WDLVTLPKGKKTVGCKWVYTIKHKADGTIERYKARLVAKGYTQSYGVDYQETFAPVAKLN 73

Query: 169 SVHVIFSLGTNLSWKMFQMYVK 234
           +V ++ SL  N  W + Q  VK
Sbjct: 74  TVRILLSLAANQDWPLLQFDVK 95



 Score = 47.8 bits (112), Expect(2) = 9e-16
 Identities = 23/52 (44%), Positives = 35/52 (67%)
 Frame = +3

Query: 231 KSAFLYCDFIKEVYMEQPS*VCNSGVDVVCKLKKAIYHFKQSSRA*FQKLLK 386
           K+AFL+ + ++E+YM+ P  + +S    VCKL+KA+Y  KQS RA F +  K
Sbjct: 95  KNAFLHGEILEEIYMDLPPGMIDSNEMKVCKLRKALYGLKQSPRAWFGRFTK 146


>gb|PRQ42837.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1231

 Score = 65.5 bits (158), Expect(2) = 2e-15
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
           W++V+     KT  CR+ YT+K+N +G     KA+L  + YT    VDY ET + +AK+N
Sbjct: 750 WELVSLPPGKKTVGCRWVYTVKHNSDGSVDRYKARLVAKGYTQKYGVDYDETFAPVAKIN 809

Query: 169 SVHVIFSLGTNLSWKMFQMYVK 234
           ++ V+ SL  NL W + Q  VK
Sbjct: 810 TIRVLLSLAANLDWPLQQFDVK 831



 Score = 47.4 bits (111), Expect(2) = 2e-15
 Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
 Frame = +3

Query: 231  KSAFLYCDFIKEVYMEQPS*VCNS-GVDVVCKLKKAIYHFKQSSRA*FQKLLKLAYNI 401
            K+AFL+ D  +EVYM+ P     S G  VVCKLKK++Y  KQS RA F +  K    I
Sbjct: 831  KNAFLHGDLHEEVYMDLPPGYGTSTGEQVVCKLKKSLYGLKQSPRAWFGRFTKFMKKI 888


>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
          Length = 1180

 Score = 65.5 bits (158), Expect(2) = 2e-15
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
           W++V+     KT  CR+ YT+K+N +G     KA+L  + YT    VDY ET + +AK+N
Sbjct: 699 WELVSLPQGKKTVGCRWVYTVKHNSDGSVDRYKARLVAKGYTQKYGVDYDETFAPVAKIN 758

Query: 169 SVHVIFSLGTNLSWKMFQMYVK 234
           ++ V+ SL  NL W + Q  VK
Sbjct: 759 TIRVLLSLAANLDWPLQQFDVK 780



 Score = 47.4 bits (111), Expect(2) = 2e-15
 Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
 Frame = +3

Query: 231 KSAFLYCDFIKEVYMEQPS*VCNS-GVDVVCKLKKAIYHFKQSSRA*FQKLLKLAYNI 401
           K+AFL+ D  +EVYM+ P     S G  VVCKLKK++Y  KQS RA F +  K    I
Sbjct: 780 KNAFLHGDLHEEVYMDLPPGYGTSTGEQVVCKLKKSLYGLKQSPRAWFGRFTKFMKKI 837


>gb|PRQ55789.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1127

 Score = 65.5 bits (158), Expect(2) = 2e-15
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
           W++V+     KT  CR+ YT+K+N +G     KA+L  + YT    VDY ET + +AK+N
Sbjct: 646 WELVSLPPGKKTVGCRWVYTVKHNSDGSVDRYKARLVAKGYTQKYGVDYDETFAPVAKIN 705

Query: 169 SVHVIFSLGTNLSWKMFQMYVK 234
           ++ V+ SL  NL W + Q  VK
Sbjct: 706 TIRVLLSLAANLDWPLQQFDVK 727



 Score = 47.4 bits (111), Expect(2) = 2e-15
 Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
 Frame = +3

Query: 231 KSAFLYCDFIKEVYMEQPS*VCNS-GVDVVCKLKKAIYHFKQSSRA*FQKLLKLAYNI 401
           K+AFL+ D  +EVYM+ P     S G  VVCKLKK++Y  KQS RA F +  K    I
Sbjct: 727 KNAFLHGDLHEEVYMDLPPGYGTSTGEQVVCKLKKSLYGLKQSPRAWFGRFTKFMKKI 784


>gb|PRQ31964.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1480

 Score = 66.2 bits (160), Expect(2) = 2e-15
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
           W++V+     KT  CR+ YT+K+N +G     KA+L  + YT    VDY ET + +AK+N
Sbjct: 704 WELVSLPLGKKTVGCRWVYTVKHNSDGSVDRYKARLVAKGYTQKYGVDYDETFAPVAKIN 763

Query: 169 SVHVIFSLGTNLSWKMFQMYVK 234
           ++ V+ SL  NL W + Q  VK
Sbjct: 764 TIRVLLSLAANLDWPLQQFDVK 785



 Score = 46.2 bits (108), Expect(2) = 2e-15
 Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
 Frame = +3

Query: 231 KSAFLYCDFIKEVYMEQPS*VCNS-GVDVVCKLKKAIYHFKQSSRA*FQKLLKLAYNI 401
           K+AFL+ D  +EVYM+ P     S G  VVC+LKK++Y  KQS RA F +  K    I
Sbjct: 785 KNAFLHGDLHEEVYMDLPPGYGTSTGEQVVCRLKKSLYGLKQSPRAWFGRFTKFMKKI 842


>ref|XP_021800104.1| uncharacterized protein LOC110744441 [Prunus avium]
          Length = 774

 Score = 65.1 bits (157), Expect(2) = 3e-15
 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
           W++V      K   CR+ YT+KY  +G     KA+L  + YT    +DY+ET + +AK+N
Sbjct: 125 WEMVQLPQGMKPVGCRWIYTVKYKADGSIDRYKARLVAKGYTQTYGIDYHETFAPVAKIN 184

Query: 169 SVHVIFSLGTNLSWKMFQMYVK 234
           +V V+ SL  NL W + Q  VK
Sbjct: 185 TVRVLMSLAANLDWPLLQYDVK 206



 Score = 47.0 bits (110), Expect(2) = 3e-15
 Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
 Frame = +3

Query: 231 KSAFLYCDFIKEVYMEQPS*VCNS-GVDVVCKLKKAIYHFKQSSRA*F 371
           K+AFL+ D  +EVYME P  +  + G + VCKLKK++Y  KQS RA F
Sbjct: 206 KNAFLHGDLQEEVYMEPPPGISTTFGPNTVCKLKKSLYGLKQSPRAWF 253


>gb|PRQ35370.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1132

 Score = 65.5 bits (158), Expect(2) = 3e-15
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
           W++V+     KT  CR+ YT+K+N +G     KA+L  + YT    VDY ET + +AK+N
Sbjct: 651 WELVSLPPGKKTVGCRWVYTVKHNSDGSVDKYKARLVAKGYTQKYGVDYDETFAPVAKIN 710

Query: 169 SVHVIFSLGTNLSWKMFQMYVK 234
           ++ V+ SL  NL W + Q  VK
Sbjct: 711 TIRVLLSLAANLDWPLQQFDVK 732



 Score = 46.2 bits (108), Expect(2) = 3e-15
 Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
 Frame = +3

Query: 231 KSAFLYCDFIKEVYMEQPS*VCNS-GVDVVCKLKKAIYHFKQSSRA*FQKLLKLAYNI 401
           K+AFL+ D  +EVYM+ P     S G  VVC+LKK++Y  KQS RA F +  K    I
Sbjct: 732 KNAFLHGDLHEEVYMDLPPGYGTSTGEQVVCRLKKSLYGLKQSPRAWFGRFTKFMKKI 789


>gb|OTF86030.1| putative ribonuclease H-like domain-containing protein [Helianthus
            annuus]
          Length = 1532

 Score = 67.0 bits (162), Expect(2) = 1e-14
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1    WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
            W+    L   KT  CR+ +TIKY P+G     KA+L  + YT    +DY ET S +AK+N
Sbjct: 1047 WEKCALLVGKKTVGCRWVFTIKYKPDGTIERYKARLVAKGYTQTYGIDYSETFSPVAKIN 1106

Query: 169  SVHVIFSLGTNLSWKMFQMYVK 234
            ++ V+FS+  N  W + Q  VK
Sbjct: 1107 TIRVLFSVAANKGWPLHQFDVK 1128



 Score = 42.7 bits (99), Expect(2) = 1e-14
 Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
 Frame = +3

Query: 231  KSAFLYCDFIKEVYMEQP-S*VCNSGVDVVCKLKKAIYHFKQSSRA*F 371
            K+AFL+ +  +EVYME P     N G   VC+LKK++Y  KQS RA F
Sbjct: 1128 KNAFLHGELKEEVYMEAPHGFTVNFGEREVCRLKKSLYGLKQSPRAWF 1175


>gb|PRQ56600.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1518

 Score = 67.4 bits (163), Expect(2) = 1e-14
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1    WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
            W++V+     KT  CR+ YT+K+N NG     KA+L  + YT    VDY ET + +AK+N
Sbjct: 1068 WELVSLPPGKKTVGCRWVYTVKHNSNGSVDRYKARLVAKGYTQKYGVDYDETFAPVAKIN 1127

Query: 169  SVHVIFSLGTNLSWKMFQMYVK 234
            ++ V+ SL  NL W + Q  VK
Sbjct: 1128 TIRVLLSLAANLDWPLQQFDVK 1149



 Score = 42.4 bits (98), Expect(2) = 1e-14
 Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
 Frame = +3

Query: 231  KSAFLYCDFIKEVYMEQPS*VCNSGVD-VVCKLKKAIYHFKQSSRA*F 371
            K+AFL+ D  +EVYM+ P     S  + VVCKL+K++Y  KQS RA F
Sbjct: 1149 KNAFLHGDLHEEVYMDLPPGYGTSSKEQVVCKLQKSLYGLKQSPRAWF 1196


>gb|PNX83829.1| beta-galactosidase [Trifolium pratense]
          Length = 543

 Score = 64.7 bits (156), Expect(2) = 2e-14
 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
           WD+V      K   CR+ YT+KY P+G     KA+L  + YT    +DY ET + +AK+N
Sbjct: 60  WDLVDCPKGKKPVGCRWVYTVKYKPDGEIERYKARLVAKGYTQAYGIDYTETFAPVAKIN 119

Query: 169 SVHVIFSLGTNLSWKMFQMYVK 234
           +V V+ SL  N  W + Q  VK
Sbjct: 120 TVRVLLSLAANFDWPLQQFDVK 141



 Score = 44.3 bits (103), Expect(2) = 2e-14
 Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
 Frame = +3

Query: 231 KSAFLYCDFIKEVYMEQPS*VCNSG---VDVVCKLKKAIYHFKQSSRA*FQKLLK 386
           K+AFL+ + ++EVYM+ P   CN        VCKLKK++Y  KQS RA F +  K
Sbjct: 141 KNAFLHGELLEEVYMDLPP-GCNKSERHAQKVCKLKKSLYGLKQSPRAWFGRFTK 194


>gb|PRQ27705.1| putative linoleate 9S-lipoxygenase [Rosa chinensis]
          Length = 1268

 Score = 65.5 bits (158), Expect(2) = 3e-14
 Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
           W++V+     KT  CR+ YT+K+N +G     KA+L  + YT    VDY ET + +AK+N
Sbjct: 719 WELVSLPPGKKTVGCRWVYTVKHNSDGSVDRYKARLVAKGYTQKYSVDYDETFAPVAKIN 778

Query: 169 SVHVIFSLGTNLSWKMFQMYVK 234
           ++ V+ SL  NL W + Q  VK
Sbjct: 779 TIQVLLSLAANLDWPLQQFDVK 800



 Score = 43.1 bits (100), Expect(2) = 3e-14
 Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
 Frame = +3

Query: 231 KSAFLYCDFIKEVYMEQPS*VCNS-GVDVVCKLKKAIYHFKQSSRA*F 371
           K+AFL+ D  +EVYM+ P     S GV VVC+L+K+++  KQS RA F
Sbjct: 800 KNAFLHGDLNEEVYMDLPPGYGTSTGVKVVCRLRKSLHGLKQSPRAWF 847


>dbj|GAU31450.1| hypothetical protein TSUD_72310 [Trifolium subterraneum]
          Length = 1433

 Score = 66.6 bits (161), Expect(2) = 4e-14
 Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1    WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
            WD+V      K   CR+ YT+KY P+G     KA+L  + YT    +DY ET + +AK+N
Sbjct: 950  WDLVDCPKGKKPVGCRWVYTVKYKPDGEIERFKARLVAKGYTQAYGIDYTETFAPVAKIN 1009

Query: 169  SVHVIFSLGTNLSWKMFQMYVK 234
            +V V+ SL  NL W + Q  VK
Sbjct: 1010 TVRVLLSLAANLDWPLQQFDVK 1031



 Score = 41.6 bits (96), Expect(2) = 4e-14
 Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
 Frame = +3

Query: 231  KSAFLYCDFIKEVYMEQPS*VCNS---GVDVVCKLKKAIYHFKQSSRA*FQKLLK 386
            K+AFL+ + ++EVYM+ P   C+        VCKLKK++Y  KQS RA F +  K
Sbjct: 1031 KNAFLHRELLEEVYMDLPP-GCDKLERHAQKVCKLKKSLYGLKQSPRAWFGRFTK 1084


>gb|PRQ31062.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 417

 Score = 62.4 bits (150), Expect(2) = 4e-14
 Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
           W++V+     +T  CR+ +T+K+N +G     KA+L  + YT    VDY ET + +AK+N
Sbjct: 23  WELVSLPPGKQTVGCRWVFTVKHNSDGSVDRYKARLVAKGYTQKYGVDYDETFAPVAKIN 82

Query: 169 SVHVIFSLGTNLSWKMFQMYVK 234
           ++ V+ SL  NL W + Q  VK
Sbjct: 83  TIRVLLSLAANLDWPLQQFDVK 104



 Score = 45.8 bits (107), Expect(2) = 4e-14
 Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
 Frame = +3

Query: 231 KSAFLYCDFIKEVYMEQPS*VCNSGVD-VVCKLKKAIYHFKQSSRA*FQKLLKLAYNI 401
           K+AFL+ D  +EVYM+ P     S  + VVCKLKK++Y  KQS RA F +  K    I
Sbjct: 104 KNAFLHGDLHEEVYMDLPPGYGTSSKEQVVCKLKKSLYGLKQSPRAWFGRFTKFMKKI 161


>gb|KYP49029.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 184

 Score = 62.4 bits (150), Expect(2) = 5e-14
 Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
           W++VT     K   C++ YT+KY  +G     KA+L  + +T    VDY ET + +AK+N
Sbjct: 14  WELVTLPIGKKPVGCKWVYTVKYKADGSIERYKARLVAKGFTQTYGVDYLETFAPVAKMN 73

Query: 169 SVHVIFSLGTNLSWKMFQMYVK 234
           ++ VI SL  N  W + Q  VK
Sbjct: 74  TIRVILSLAANYGWNLEQFDVK 95



 Score = 45.4 bits (106), Expect(2) = 5e-14
 Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
 Frame = +3

Query: 231 KSAFLYCDFIKEVYMEQPS*VCNS-GVDVVCKLKKAIYHFKQSSRA*FQKLLKL 389
           K+AFL+ D  +E+YME PS        + VCKLKKA+Y  KQS  A F +  K+
Sbjct: 95  KNAFLHGDLEEEIYMEIPSGYSRDVAANTVCKLKKALYGLKQSPHAWFGRFTKV 148


>gb|PRQ60643.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 967

 Score = 61.2 bits (147), Expect(2) = 6e-14
 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
           W IV      K   CR+ Y  K++ +G     KA+L  R +T    VDY ET +H+AK+N
Sbjct: 487 WSIVQIPKGKKAVGCRWIYKTKFHSDGTVERHKARLMARGFTQTYGVDYKETFAHVAKMN 546

Query: 169 SVHVIFSLGTNLSWKMFQMYVK 234
           +V V+ S+  N +W ++QM VK
Sbjct: 547 TVRVLLSVAVNHAWPLYQMDVK 568



 Score = 46.2 bits (108), Expect(2) = 6e-14
 Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
 Frame = +3

Query: 231 KSAFLYCDFIKEVYMEQPS*VCNS-GVDVVCKLKKAIYHFKQSSRA*FQKLLKLAYNISI 407
           K+AFL+ D  +E+YM+ P     S   ++VCKL KAIY  KQS RA + KL  +   +  
Sbjct: 568 KNAFLHGDLEEEIYMKLPPGHSQSHDPNIVCKLHKAIYGLKQSPRAWYAKLSSVLEEVGF 627

Query: 408 H 410
           H
Sbjct: 628 H 628


>dbj|GAU48207.1| hypothetical protein TSUD_304870 [Trifolium subterraneum]
          Length = 1001

 Score = 66.6 bits (161), Expect(2) = 1e-13
 Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
 Frame = +1

Query: 1   WDIVTYLCNFKTTACRYAYTIKYNPNGFCSCLKAKLEDRIYT----VDYYETLSHMAKLN 168
           W +VT     KT  C++ +T+KYN +G     KA+L  + +T    +DY ET + +AKLN
Sbjct: 521 WSVVTLPDGKKTVGCKWVFTVKYNSDGSIERYKARLVAKGFTQTYGIDYSETFAPVAKLN 580

Query: 169 SVHVIFSLGTNLSWKMFQMYVK 234
           +V ++ SL  NL W + Q+ VK
Sbjct: 581 TVRILLSLAANLDWPLHQLDVK 602



 Score = 39.7 bits (91), Expect(2) = 1e-13
 Identities = 23/49 (46%), Positives = 29/49 (59%)
 Frame = +3

Query: 231 KSAFLYCDFIKEVYMEQPS*VCNSGVDVVCKLKKAIYHFKQSSRA*FQK 377
           K+AFL  D  +EVYM  P    +     VCKL K++Y  KQS RA F+K
Sbjct: 602 KNAFLNGDLEEEVYMNIPPGFEDRFGSNVCKLNKSLYGLKQSPRAWFEK 650