BLASTX nr result
ID: Cheilocostus21_contig00045416
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00045416
(605 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1] 71 1e-10
ref|YP_009229919.1| polyprotein [Blackberry Virus F] >gi|6892539... 65 1e-08
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus] 64 3e-08
gb|ABQ45368.1| polyprotein, partial [Citrus yellow mosaic virus] 62 3e-08
gb|ABN15089.1| polyprotein, partial [Citrus yellow mosaic virus] 62 3e-08
gb|ABN15090.1| polyprotein, partial [Citrus yellow mosaic virus] 62 3e-08
ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discolor... 64 4e-08
gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration... 63 6e-08
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus] 63 6e-08
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus] 63 6e-08
gb|ACH86211.1| unknown [Citrus yellow mosaic virus] 62 9e-08
gb|AER00538.1| ORF III [Citrus yellow mosaic virus] 62 9e-08
ref|NP_569153.1| unknown [Citrus yellow mosaic virus] >gi|164169... 62 9e-08
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus] 62 2e-07
gb|ABQ45369.1| polyprotein, partial [Citrus yellow mosaic virus] 59 3e-07
gb|ASA40120.1| ORF3 [Dioscorea bacilliform virus] 60 5e-07
gb|ANG56366.1| protease, partial [Fig badnavirus 1] 59 1e-06
gb|ANG56364.1| protease, partial [Fig badnavirus 1] 59 1e-06
gb|ANG56363.1| protease, partial [Fig badnavirus 1] 59 1e-06
gb|ANG56362.1| protease, partial [Fig badnavirus 1] 59 1e-06
>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
Length = 1846
Score = 70.9 bits (172), Expect = 1e-10
Identities = 34/66 (51%), Positives = 48/66 (72%)
Frame = -1
Query: 596 LYEETTSHITVA*EAQGPKLIKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTI 417
L EE + + V E + K+++NMLYN + I+IPGI KFS+KAILDTGAT +D+ +I
Sbjct: 1039 LQEEKVNKVAVQEEQRPKKMVRNMLYNFIISIDIPGIDKFSVKAILDTGATTCCIDQESI 1098
Query: 416 PEEALD 399
P+EAL+
Sbjct: 1099 PKEALE 1104
>ref|YP_009229919.1| polyprotein [Blackberry Virus F]
gb|AHX37579.1| polyprotein [Blackberry Virus F]
Length = 1948
Score = 65.1 bits (157), Expect = 1e-08
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = -1
Query: 605 SLMLYEETTSHITVA*EAQGPKLIKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDK 426
++ + EET+ T + G K+I N LYN+ V+I IPG+ FS++AILDTGAT VDK
Sbjct: 1108 AMAITEETSLSSTTEAPSHGRKVI-NRLYNMVVNINIPGVKPFSVRAILDTGATTCCVDK 1166
Query: 425 GTIPEEALDVS 393
G +P EAL+ S
Sbjct: 1167 GAVPAEALEKS 1177
>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
Length = 1976
Score = 63.9 bits (154), Expect = 3e-08
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Frame = -1
Query: 587 ETTSHITVA*EAQGPKL--IKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTIP 414
E T+ I + Q K +KNMLYN+ V IEIPGIP F++KAILDTGAT +D ++P
Sbjct: 1157 EETTRIVAHGDTQVTKTRPVKNMLYNMDVRIEIPGIPAFTVKAILDTGATTCCIDSRSVP 1216
Query: 413 EEALD 399
++AL+
Sbjct: 1217 KDALE 1221
>gb|ABQ45368.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 207
Score = 62.0 bits (149), Expect = 3e-08
Identities = 27/46 (58%), Positives = 38/46 (82%)
Frame = -1
Query: 536 IKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTIPEEALD 399
+KNMLYN+ V +EIPGIP F++KAILDTGAT +D ++P++AL+
Sbjct: 9 VKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVPKDALE 54
>gb|ABN15089.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 226
Score = 62.0 bits (149), Expect = 3e-08
Identities = 27/46 (58%), Positives = 38/46 (82%)
Frame = -1
Query: 536 IKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTIPEEALD 399
+KNMLYN+ V +EIPGIP F++KAILDTGAT +D ++P++AL+
Sbjct: 29 VKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVPKDALE 74
>gb|ABN15090.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 226
Score = 62.0 bits (149), Expect = 3e-08
Identities = 27/46 (58%), Positives = 38/46 (82%)
Frame = -1
Query: 536 IKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTIPEEALD 399
+KNMLYN+ V +EIPGIP F++KAILDTGAT +D ++P++AL+
Sbjct: 29 VKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVPKDALE 74
>ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
emb|CDN68224.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1830
Score = 63.5 bits (153), Expect = 4e-08
Identities = 27/60 (45%), Positives = 44/60 (73%)
Frame = -1
Query: 572 ITVA*EAQGPKLIKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTIPEEALDVS 393
+ +A + +L+KNMLYN ++ EIP +PKF ++AILDTGA+ V++G +P+EA++ S
Sbjct: 1031 VLIAGAEERKRLVKNMLYNFDIEFEIPDVPKFKVRAILDTGASTCCVNEGAVPKEAIEDS 1090
>gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1789
Score = 62.8 bits (151), Expect = 6e-08
Identities = 26/50 (52%), Positives = 40/50 (80%)
Frame = -1
Query: 542 KLIKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTIPEEALDVS 393
+L+KNMLYN ++ EIP +PKF ++AILDTGA+ V++G +P+EA++ S
Sbjct: 1077 RLVKNMLYNFDIEFEIPDVPKFKVRAILDTGASTCCVNEGAVPKEAIEDS 1126
>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
Length = 1967
Score = 62.8 bits (151), Expect = 6e-08
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Frame = -1
Query: 587 ETTSHITVA*EAQGPKL--IKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTIP 414
E T+ I + Q K +KNMLYN+ V +EIPGIP F++KAILDTGAT +D ++P
Sbjct: 1149 EETTRIVAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVP 1208
Query: 413 EEALD 399
++AL+
Sbjct: 1209 KDALE 1213
>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
Length = 1979
Score = 62.8 bits (151), Expect = 6e-08
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Frame = -1
Query: 587 ETTSHITVA*EAQGPKL--IKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTIP 414
E T+ I + Q K +KNMLYN+ V +EIPGIP F++KAILDTGAT +D ++P
Sbjct: 1159 EETTRIVAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVP 1218
Query: 413 EEALD 399
++AL+
Sbjct: 1219 KDALE 1223
>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
Length = 1490
Score = 62.4 bits (150), Expect = 9e-08
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Frame = -1
Query: 587 ETTSHITVA*EAQGPKL--IKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTIP 414
E T+ I + Q K +KNMLYN+ V +EIPGIP F++KAILDTGAT +D ++P
Sbjct: 673 EETTRIIAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVP 732
Query: 413 EEALD 399
++AL+
Sbjct: 733 KDALE 737
>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
Length = 1982
Score = 62.4 bits (150), Expect = 9e-08
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Frame = -1
Query: 587 ETTSHITVA*EAQGPKL--IKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTIP 414
E T+ I + Q K +KNMLYN+ V +EIPGIP F++KAILDTGAT +D ++P
Sbjct: 1164 EETTRIIAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVP 1223
Query: 413 EEALD 399
++AL+
Sbjct: 1224 KDALE 1228
>ref|NP_569153.1| unknown [Citrus yellow mosaic virus]
gb|AAL18495.1|AF347695_3 unknown [Citrus yellow mosaic virus]
Length = 1983
Score = 62.4 bits (150), Expect = 9e-08
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Frame = -1
Query: 587 ETTSHITVA*EAQGPKL--IKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTIP 414
E T+ I + Q K +KNMLYN+ V +EIPGIP F++KAILDTGAT +D ++P
Sbjct: 1165 EETTRIIAHGDTQVTKTRPVKNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVP 1224
Query: 413 EEALD 399
++AL+
Sbjct: 1225 KDALE 1229
>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
Length = 1968
Score = 61.6 bits (148), Expect = 2e-07
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Frame = -1
Query: 587 ETTSHITVA*EAQGPKL--IKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTIP 414
E T+ I + Q K ++NMLYN+ V +EIPGIP F++KAILDTGAT +D ++P
Sbjct: 1150 EETTRIVAHGDTQVTKTRPVRNMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVP 1209
Query: 413 EEALD 399
++AL+
Sbjct: 1210 KDALE 1214
>gb|ABQ45369.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 196
Score = 58.9 bits (141), Expect = 3e-07
Identities = 26/44 (59%), Positives = 36/44 (81%)
Frame = -1
Query: 530 NMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTIPEEALD 399
NMLYN+ V +EIPGIP F++KAILDTGAT +D ++P++AL+
Sbjct: 1 NMLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVPKDALE 44
>gb|ASA40120.1| ORF3 [Dioscorea bacilliform virus]
Length = 2005
Score = 60.1 bits (144), Expect = 5e-07
Identities = 35/71 (49%), Positives = 42/71 (59%)
Frame = -1
Query: 596 LYEETTSHITVA*EAQGPKLIKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTI 417
L EE I A A P+ N LYNL +I IPG+P F L+AILDTGAT VD +
Sbjct: 1304 LIEEENEKICSAETAIRPRRGGNKLYNLTAEIIIPGVPPFKLRAILDTGATTCCVDIKAV 1363
Query: 416 PEEALDVSIDQ 384
P+EAL+ S Q
Sbjct: 1364 PKEALEESAFQ 1374
>gb|ANG56366.1| protease, partial [Fig badnavirus 1]
Length = 359
Score = 58.5 bits (140), Expect = 1e-06
Identities = 24/50 (48%), Positives = 38/50 (76%)
Frame = -1
Query: 542 KLIKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTIPEEALDVS 393
K +KNMLYN ++ EIP + +F ++AILDTGA+ +++G +P+EAL+ S
Sbjct: 119 KFVKNMLYNFDIEFEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEES 168
>gb|ANG56364.1| protease, partial [Fig badnavirus 1]
Length = 359
Score = 58.5 bits (140), Expect = 1e-06
Identities = 24/50 (48%), Positives = 38/50 (76%)
Frame = -1
Query: 542 KLIKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTIPEEALDVS 393
K +KNMLYN ++ EIP + +F ++AILDTGA+ +++G +P+EAL+ S
Sbjct: 119 KFVKNMLYNFDIEFEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEES 168
>gb|ANG56363.1| protease, partial [Fig badnavirus 1]
Length = 359
Score = 58.5 bits (140), Expect = 1e-06
Identities = 24/50 (48%), Positives = 38/50 (76%)
Frame = -1
Query: 542 KLIKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTIPEEALDVS 393
K +KNMLYN ++ EIP + +F ++AILDTGA+ +++G +P+EAL+ S
Sbjct: 119 KFVKNMLYNFDIEFEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEES 168
>gb|ANG56362.1| protease, partial [Fig badnavirus 1]
Length = 359
Score = 58.5 bits (140), Expect = 1e-06
Identities = 24/50 (48%), Positives = 38/50 (76%)
Frame = -1
Query: 542 KLIKNMLYNLKVDIEIPGIPKFSLKAILDTGATIYFVDKGTIPEEALDVS 393
K +KNMLYN ++ EIP + +F ++AILDTGA+ +++G +P+EAL+ S
Sbjct: 119 KFVKNMLYNFDIEFEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEES 168