BLASTX nr result

ID: Cheilocostus21_contig00045362 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00045362
         (827 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009391100.2| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing...   106   1e-22
ref|XP_009417798.1| PREDICTED: RING-H2 finger protein ATL43-like...    98   1e-19
ref|XP_008799433.1| PREDICTED: RING-H2 finger protein ATL43 [Pho...    86   2e-15
ref|XP_010927112.1| PREDICTED: RING-H2 finger protein ATL43-like...    86   3e-15
ref|XP_010929293.1| PREDICTED: RING-H2 finger protein ATL43-like...    80   2e-13
gb|OAY80179.1| RING-H2 finger protein ATL43 [Ananas comosus]           71   2e-10

>ref|XP_009391100.2| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL43-like
           [Musa acuminata subsp. malaccensis]
          Length = 461

 Score =  106 bits (265), Expect = 1e-22
 Identities = 63/106 (59%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
 Frame = +2

Query: 2   PTDLLFLRREMIITDSGRFSASKV--DXXXXXXXXXXXXXXXKCASEIAGVRCMPNGVET 175
           PTDLLFLRREMIIT+SGRFSASK                   +CASEIAGV  MP+G   
Sbjct: 359 PTDLLFLRREMIITESGRFSASKAVRALSSSTAPGDADAAASRCASEIAGVHRMPSG--R 416

Query: 176 VSAAGVGGARRIAEEERTLRRWLGFASIRTAARWSGRRERVNGPES 313
            +  G GGARR AEEERTLRRW+GFA++RT AR  GRRE  N PE+
Sbjct: 417 ANPTGAGGARRAAEEERTLRRWMGFAAMRT-ARGLGRRESGNRPET 461


>ref|XP_009417798.1| PREDICTED: RING-H2 finger protein ATL43-like [Musa acuminata subsp.
           malaccensis]
          Length = 401

 Score = 97.8 bits (242), Expect = 1e-19
 Identities = 57/106 (53%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
 Frame = +2

Query: 2   PTDLLFLRREMIITDSGRFSASKV--DXXXXXXXXXXXXXXXKCASEIAGVRCMPNGVET 175
           PTD+LFLRREMIIT+SGRFSASK                   +CAS IAGV  +P     
Sbjct: 302 PTDMLFLRREMIITESGRFSASKAVRALSSPAAVVDEELDASRCASGIAGVGRVP----- 356

Query: 176 VSAAGVGGARRIAEEERTLRRWLGFASIRTAARWSGRRERVNGPES 313
            S    GGARR+AEEERTLRRWLGF+++RTA RW  +RE  N  E+
Sbjct: 357 -SYGATGGARRLAEEERTLRRWLGFSAMRTAVRWLWKRESGNRLET 401


>ref|XP_008799433.1| PREDICTED: RING-H2 finger protein ATL43 [Phoenix dactylifera]
          Length = 419

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 52/105 (49%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2   PTDLLFLRREMIITDSGRFSASKVD-XXXXXXXXXXXXXXXKCASEIAGVRCMPNGVETV 178
           P+DLLFLR EMIITDSGRFSAS+                  +CASEI G+  +     + 
Sbjct: 321 PSDLLFLRSEMIITDSGRFSASRAGRVSGSSSGRGRDVISPRCASEITGITRL-----ST 375

Query: 179 SAAGVGGARRIAEEERTLRRWLGFASIRTAARWSGRRERVNGPES 313
            A   G ARR+ EEERT+RRWL FA+ RT ARW G RE  +GP +
Sbjct: 376 RARSGGCARRVEEEERTMRRWLAFAAKRT-ARWLGSRESDHGPNT 419


>ref|XP_010927112.1| PREDICTED: RING-H2 finger protein ATL43-like [Elaeis guineensis]
          Length = 422

 Score = 85.5 bits (210), Expect = 3e-15
 Identities = 53/101 (52%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   PTDLLFLRREMIITDSGRFSASKVDXXXXXXXXXXXXXXX-KCASEIAGVRCMPNGVETV 178
           P+DLLFLR EMIITDSGRFSAS+                  +CASEI G R  P    + 
Sbjct: 322 PSDLLFLRSEMIITDSGRFSASRAGRASGSSTGGGRDVISARCASEITGRRRPPIRAHS- 380

Query: 179 SAAGVGGARRIAEEERTLRRWLGFASIRTAARWSGRRERVN 301
              G GGARR  EEERT+RRWLGFA+ R  ARW G R+  N
Sbjct: 381 --GGGGGARREVEEERTMRRWLGFAAKR-RARWLGSRDGAN 418


>ref|XP_010929293.1| PREDICTED: RING-H2 finger protein ATL43-like [Elaeis guineensis]
          Length = 419

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 55/105 (52%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
 Frame = +2

Query: 2   PTDLLFLRREMIITDSGRFSASKVD-XXXXXXXXXXXXXXXKCASEIAGVRCMPNGVETV 178
           P+DLLFLR EMIITDSGRFSAS+                  +CASEI G+  +P    T 
Sbjct: 321 PSDLLFLRSEMIITDSGRFSASRAGRVSGSSLGGGGDVISARCASEITGISRLP----TR 376

Query: 179 SAAGVGGARRIAEEERTLRRWLGFASIRTAARWSGRRERVNGPES 313
           S +G G AR   EEERT+RRWL FA+ RT ARW G RE  NG  S
Sbjct: 377 SRSG-GCARWGEEEERTMRRWLAFAAKRT-ARWLGSRE--NGSRS 417


>gb|OAY80179.1| RING-H2 finger protein ATL43 [Ananas comosus]
          Length = 384

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 51/103 (49%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
 Frame = +2

Query: 2   PTDLLFLRREMIITDSGRFSASKVDXXXXXXXXXXXXXXXKCASEIAGV-RCMPNGVETV 178
           P+DLLFLR EMIITDSGRFSAS+                 +C SE+AGV R  P      
Sbjct: 293 PSDLLFLRSEMIITDSGRFSASRA----AGASGGEVVSGARCLSELAGVSRIAP------ 342

Query: 179 SAAGVGGARRIAEEERTLRRWLGFASIRTAARWSGRRERVNGP 307
           S AG G A R  EE   +RRWLGFA+ RT ARW       NGP
Sbjct: 343 SRAG-GWASRTEEERSVMRRWLGFAAKRT-ARWLRGPPGDNGP 383


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