BLASTX nr result

ID: Cheilocostus21_contig00045359 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00045359
         (579 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY74397.1| putative ribonuclease H protein, partial [Ananas ...    62   1e-08
gb|PRQ37611.1| putative reverse transcriptase zinc-binding domai...    61   1e-07
gb|OAY77330.1| Serine/threonine-protein kinase STY46 [Ananas com...    58   1e-06
gb|OAY69027.1| LINE-1 retrotransposable element ORF2 protein [An...    57   3e-06
gb|OAY82706.1| putative ribonuclease H protein [Ananas comosus]        56   4e-06
ref|XP_020109325.1| uncharacterized protein LOC109724810 [Ananas...    57   4e-06
ref|XP_021844830.1| uncharacterized protein LOC110784683 [Spinac...    57   5e-06
gb|OAY67736.1| putative ribonuclease H protein [Ananas comosus]        56   8e-06

>gb|OAY74397.1| putative ribonuclease H protein, partial [Ananas comosus]
          Length = 148

 Score = 61.6 bits (148), Expect = 1e-08
 Identities = 33/83 (39%), Positives = 50/83 (60%)
 Frame = -1

Query: 336 TNGLPLIKSVYHTPLMNGNVQEPKGKSWNNLWTLRTTLKIKIFG*KLLHKKLLTFDRLSR 157
           ++G   +KSVY   L +G +++ +    + +W LR  LK+K+F   +L K+ LT D L +
Sbjct: 67  SDGRFTVKSVYSL-LNDGGLRDARS---SKIWGLRVPLKVKVFTWIVLKKRPLTADNLLK 122

Query: 156 FGLKDKTICMFCGQESETVEHLF 88
            G    T+CM CG E ETV+HLF
Sbjct: 123 RGWSGNTVCMLCGSEEETVDHLF 145


>gb|PRQ37611.1| putative reverse transcriptase zinc-binding domain-containing
           protein [Rosa chinensis]
          Length = 308

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
 Frame = -1

Query: 267 KGKSWNNLWTLRTTLKIKIFG*KLLHKKLLTFDRLSRFGLKDKTICMFCGQESETVEHLF 88
           + K  N LW L    KIKIFG  LL  +L T DRLSRFG+ +   C+ C +++ET +HLF
Sbjct: 229 QSKLINKLWKLNVQPKIKIFGWLLLRGRLKTRDRLSRFGIINDNSCLLCNRDNETADHLF 288

Query: 87  QPSSCNF---L*RICNFN 43
               C F   + R+ N N
Sbjct: 289 --GYCEFTKEVWRLANIN 304


>gb|OAY77330.1| Serine/threonine-protein kinase STY46 [Ananas comosus]
          Length = 277

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/77 (40%), Positives = 49/77 (63%)
 Frame = -1

Query: 318 IKSVYHTPLMNGNVQEPKGKSWNNLWTLRTTLKIKIFG*KLLHKKLLTFDRLSRFGLKDK 139
           +KS Y + L +G +++  G+S + +W +R  LK+K+F   +L K+ LT D L + G    
Sbjct: 143 VKSAY-SMLNDGGLRD--GRS-SKIWRIRVPLKVKVFSWIVLKKRPLTADNLLKRGWTGN 198

Query: 138 TICMFCGQESETVEHLF 88
           T+C+ CG E ETV+HLF
Sbjct: 199 TVCVLCGTEEETVDHLF 215


>gb|OAY69027.1| LINE-1 retrotransposable element ORF2 protein [Ananas comosus]
          Length = 753

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 30/77 (38%), Positives = 47/77 (61%)
 Frame = -1

Query: 318 IKSVYHTPLMNGNVQEPKGKSWNNLWTLRTTLKIKIFG*KLLHKKLLTFDRLSRFGLKDK 139
           +KSVY + L +G +++ + K    +W+ R  LK+K+F   +L K+ LT D L + G    
Sbjct: 631 VKSVY-SMLNDGGLRDDRSK----IWSFRVPLKVKVFTWIVLKKRPLTADNLLKRGWTGN 685

Query: 138 TICMFCGQESETVEHLF 88
           T+C+ C  E ETV+HLF
Sbjct: 686 TVCVLCESEEETVDHLF 702


>gb|OAY82706.1| putative ribonuclease H protein [Ananas comosus]
          Length = 200

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 29/77 (37%), Positives = 47/77 (61%)
 Frame = -1

Query: 318 IKSVYHTPLMNGNVQEPKGKSWNNLWTLRTTLKIKIFG*KLLHKKLLTFDRLSRFGLKDK 139
           IKS Y + L +G  ++ +    + +W L+  LK+K+F   +L K++LT D L + G  D 
Sbjct: 76  IKSTY-SALTDGGTRDARA---SYIWKLKIPLKVKVFSWLVLKKRMLTRDTLVKRGWLDD 131

Query: 138 TICMFCGQESETVEHLF 88
           +IC+ CG   E+V+HLF
Sbjct: 132 SICVLCGSGEESVDHLF 148


>ref|XP_020109325.1| uncharacterized protein LOC109724810 [Ananas comosus]
          Length = 562

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 32/83 (38%), Positives = 47/83 (56%)
 Frame = -1

Query: 336 TNGLPLIKSVYHTPLMNGNVQEPKGKSWNNLWTLRTTLKIKIFG*KLLHKKLLTFDRLSR 157
           +N L  +KS Y   L +G  ++P     N +W L   LK+K+F    L K+L T D L++
Sbjct: 452 SNRLFSVKSTY-LALTDGGTRDP---GLNEIWGLHIPLKVKVFCWLALKKRLPTTDLLAK 507

Query: 156 FGLKDKTICMFCGQESETVEHLF 88
            G    T+C+ CG E E+V+HLF
Sbjct: 508 RGWVGNTVCVLCGVEDESVDHLF 530


>ref|XP_021844830.1| uncharacterized protein LOC110784683 [Spinacia oleracea]
          Length = 737

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
 Frame = -1

Query: 330 GLPLIKSVYHTPLMNGNVQEP---KGKSWNNLWTLRTTLKIKIFG*KLLHKKLLTFDRLS 160
           G P +KS+Y+  +M  N+Q P   K K W  LW      K +IF  +LL++ + T  RL 
Sbjct: 380 GQPTVKSIYNQLIMEKNLQTPLDNKDKFWKRLWKSELIPKWRIFTWRLLNEAIATRSRLR 439

Query: 159 RFGLKDKTICMFCGQESETVEHLFQPSSCNFL*RICNFNLGAWK 28
           + G+  +  C+ C +  E  +HLF         R C  +   WK
Sbjct: 440 KRGMMVEDCCVLCKKSQENDKHLF---------RDCPISSHVWK 474


>gb|OAY67736.1| putative ribonuclease H protein [Ananas comosus]
          Length = 326

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 31/83 (37%), Positives = 48/83 (57%)
 Frame = -1

Query: 336 TNGLPLIKSVYHTPLMNGNVQEPKGKSWNNLWTLRTTLKIKIFG*KLLHKKLLTFDRLSR 157
           T+G   +KS Y + L +G V++      + +W L+  LK K+FG  +L K+ LT D L +
Sbjct: 209 TDGQFSVKSAY-SALTDGGVRDA---CVSKIWELKIPLKFKVFGWLVLKKRTLTRDILVK 264

Query: 156 FGLKDKTICMFCGQESETVEHLF 88
            G+ +   C+ CG   ETV+HLF
Sbjct: 265 RGISNDPTCVLCGTHEETVDHLF 287


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