BLASTX nr result

ID: Cheilocostus21_contig00045083 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00045083
         (454 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009384115.2| PREDICTED: myb-related protein Myb4-like [Mu...    56   4e-06
ref|XP_009386595.1| PREDICTED: transcription factor RAX2 [Musa a...    55   5e-06

>ref|XP_009384115.2| PREDICTED: myb-related protein Myb4-like [Musa acuminata subsp.
           malaccensis]
          Length = 378

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 55/159 (34%), Positives = 72/159 (45%), Gaps = 43/159 (27%)
 Frame = -1

Query: 403 FHPNSVDLEGIPMVPSYFPASFIP----PLPNLIAFGGEQQSCSSS-------------- 278
           F  ++ DLEGIP+  S+   S +        NLI FGG+  SCSSS              
Sbjct: 236 FSSSAPDLEGIPI--SHLLNSLVAHPTHQSGNLIVFGGDHHSCSSSDGSSIQIGYGRDFN 293

Query: 277 ---------VGFESYLHGNGLES------GGG------EVTGCNFGEVKPAAAEVCPIAD 161
                    +GFES+L+G GLE+      GGG         G +FGEVKP  A  CP   
Sbjct: 294 HGLYNGRENMGFESHLYG-GLETEKLLLVGGGGGGCEASSIGYSFGEVKPTIA--CPTD- 349

Query: 160 VAC----FNGKNSSTTAVASAGMGMGSCFRNLARAMYHC 56
            AC     +G++ + T          + FRN+A AMYHC
Sbjct: 350 -ACHGLYLDGRSGAAT---------DTSFRNIASAMYHC 378


>ref|XP_009386595.1| PREDICTED: transcription factor RAX2 [Musa acuminata subsp.
           malaccensis]
          Length = 273

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 46/136 (33%), Positives = 62/136 (45%), Gaps = 26/136 (19%)
 Frame = -1

Query: 385 DLEGIPMVPSYFPA---SFIPPL--------PNLIAFGGEQQSCSSSVG----------- 272
           DLEGIP+ PS F +   +F  PL         NLI FGG+Q SCSSS G           
Sbjct: 150 DLEGIPIHPSLFDSLTPTFFSPLCQRPAYQSGNLIMFGGDQPSCSSSDGSSIHTGYGSEH 209

Query: 271 --FESYLHGNGLESGGGEVTGCNFGEVKPAAAEVCPI--ADVACFNGKNSSTTAVASAGM 104
              E++LH   L  G   +    +   +P+    CP+   D    + K+S+T        
Sbjct: 210 MSSENHLHEKLLPCGEASL---RYEFDEPSQLHACPVDAFDKLYLDSKSSAT-------- 258

Query: 103 GMGSCFRNLARAMYHC 56
            M    RN+ARA+YHC
Sbjct: 259 -MDMSLRNMARAIYHC 273


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