BLASTX nr result

ID: Cheilocostus21_contig00045066 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00045066
         (459 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018673492.1| PREDICTED: transcription initiation factor T...    60   2e-07
ref|XP_018685033.1| PREDICTED: transcription initiation factor T...    60   2e-07
ref|XP_009411258.1| PREDICTED: transcription initiation factor T...    60   2e-07
ref|XP_022889776.1| transcription initiation factor TFIID subuni...    54   2e-06
gb|PKA64200.1| Dynein assembly factor with WDR repeat domains 1 ...    57   2e-06
gb|PIN00739.1| hypothetical protein CDL12_26758 [Handroanthus im...    55   3e-06
ref|XP_020677718.1| transcription initiation factor TFIID subuni...    55   8e-06
ref|XP_020677713.1| transcription initiation factor TFIID subuni...    55   8e-06

>ref|XP_018673492.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Musa acuminata subsp. malaccensis]
          Length = 579

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = -2

Query: 458 LLKAFPTRSTPVYALQFSRRNLLFAAGALQKC 363
           LLKA PT+STPVY LQFSRRNLLFAAGAL KC
Sbjct: 547 LLKALPTKSTPVYTLQFSRRNLLFAAGALSKC 578


>ref|XP_018685033.1| PREDICTED: transcription initiation factor TFIID subunit 5 isoform
           X2 [Musa acuminata subsp. malaccensis]
          Length = 657

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = -2

Query: 458 LLKAFPTRSTPVYALQFSRRNLLFAAGALQKC 363
           LLKA PT+STPVY LQFSRRNLLFAAGAL KC
Sbjct: 626 LLKALPTKSTPVYTLQFSRRNLLFAAGALSKC 657


>ref|XP_009411258.1| PREDICTED: transcription initiation factor TFIID subunit 5 isoform
           X1 [Musa acuminata subsp. malaccensis]
          Length = 658

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = -2

Query: 458 LLKAFPTRSTPVYALQFSRRNLLFAAGALQKC 363
           LLKA PT+STPVY LQFSRRNLLFAAGAL KC
Sbjct: 627 LLKALPTKSTPVYTLQFSRRNLLFAAGALSKC 658


>ref|XP_022889776.1| transcription initiation factor TFIID subunit 5-like [Olea europaea
           var. sylvestris]
          Length = 124

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = -2

Query: 455 LKAFPTRSTPVYALQFSRRNLLFAAGALQK 366
           LK  PT+STPVYALQFSRRNLLFAAGAL K
Sbjct: 93  LKTLPTKSTPVYALQFSRRNLLFAAGALTK 122


>gb|PKA64200.1| Dynein assembly factor with WDR repeat domains 1 [Apostasia
           shenzhenica]
          Length = 653

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/31 (87%), Positives = 29/31 (93%)
 Frame = -2

Query: 458 LLKAFPTRSTPVYALQFSRRNLLFAAGALQK 366
           LLKA PT+STPVY+LQFSRRNLLFAAGAL K
Sbjct: 622 LLKALPTKSTPVYSLQFSRRNLLFAAGALSK 652


>gb|PIN00739.1| hypothetical protein CDL12_26758 [Handroanthus impetiginosus]
          Length = 176

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = -2

Query: 455 LKAFPTRSTPVYALQFSRRNLLFAAGALQK 366
           LK  PT+STPVYALQFSRRNLLFAAGAL K
Sbjct: 145 LKTLPTKSTPVYALQFSRRNLLFAAGALSK 174


>ref|XP_020677718.1| transcription initiation factor TFIID subunit 5 isoform X2
           [Dendrobium catenatum]
          Length = 656

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -2

Query: 458 LLKAFPTRSTPVYALQFSRRNLLFAAGA 375
           LLKAFPT+STPVY LQFSRRNLLFAAGA
Sbjct: 624 LLKAFPTKSTPVYTLQFSRRNLLFAAGA 651


>ref|XP_020677713.1| transcription initiation factor TFIID subunit 5 isoform X1
           [Dendrobium catenatum]
 ref|XP_020677714.1| transcription initiation factor TFIID subunit 5 isoform X1
           [Dendrobium catenatum]
 ref|XP_020677715.1| transcription initiation factor TFIID subunit 5 isoform X1
           [Dendrobium catenatum]
 ref|XP_020677716.1| transcription initiation factor TFIID subunit 5 isoform X1
           [Dendrobium catenatum]
 ref|XP_020677717.1| transcription initiation factor TFIID subunit 5 isoform X1
           [Dendrobium catenatum]
          Length = 657

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 26/28 (92%), Positives = 27/28 (96%)
 Frame = -2

Query: 458 LLKAFPTRSTPVYALQFSRRNLLFAAGA 375
           LLKAFPT+STPVY LQFSRRNLLFAAGA
Sbjct: 625 LLKAFPTKSTPVYTLQFSRRNLLFAAGA 652


Top