BLASTX nr result

ID: Cheilocostus21_contig00045014 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00045014
         (1111 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_024037590.1| uncharacterized protein LOC112097210 [Citrus...    53   2e-06
ref|XP_010667870.1| PREDICTED: uncharacterized protein LOC104884...    59   3e-06
gb|POE54632.1| putative ribonuclease h protein [Quercus suber]         58   9e-06

>ref|XP_024037590.1| uncharacterized protein LOC112097210 [Citrus clementina]
          Length = 1154

 Score = 53.1 bits (126), Expect(2) = 2e-06
 Identities = 26/96 (27%), Positives = 44/96 (45%)
 Frame = +2

Query: 212  WKLLWKLHVTPKVILFSWKLLLARLTISSFLAKIGLGNAKVCCFCTCGLDDEKHFLLSCS 391
            W+ +WKL +  KV +F W+     L  +  L K  +    +C  C C ++   H L+ C+
Sbjct: 838  WRFIWKLAIPEKVKIFLWRAAHDLLPTAENLWKKKVLQEPMCQSCHCHVETVSHALVECN 897

Query: 392  ATNYVWNFFSNQLNLDFIFRAD*VSGY*IFWLLGFW 499
                +W + +    L  ++R D      I W+L FW
Sbjct: 898  RARKIWRYSNLAEELRGVYRCD------IVWMLQFW 927



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +1

Query: 10  QEHAWKEDLILYLGGPILASAVLNTWLPPAT*DDVWSWREDTK 138
           ++  W+EDLIL    P  A A++   LP    +D   W  D K
Sbjct: 765 EKQQWREDLILQHFRPEDAEAIMQIPLPKRPKEDQLIWHYDKK 807


>ref|XP_010667870.1| PREDICTED: uncharacterized protein LOC104884866 [Beta vulgaris
           subsp. vulgaris]
          Length = 259

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 29/78 (37%), Positives = 43/78 (55%)
 Frame = +2

Query: 206 GGWKLLWKLHVTPKVILFSWKLLLARLTISSFLAKIGLGNAKVCCFCTCGLDDEKHFLLS 385
           G WK +W+  V PKV LF WKLL   L ++  LA+ G+   K C  C  G +  +H L+ 
Sbjct: 148 GVWKKVWRAKVAPKVKLFGWKLLHNGLPVNDNLARRGVIIDKQCPRCGDGEESVEHLLMQ 207

Query: 386 CSATNYVWNFFSNQLNLD 439
           C  +  VW F   +L+++
Sbjct: 208 CDVSKQVWYFSPLRLDME 225


>gb|POE54632.1| putative ribonuclease h protein [Quercus suber]
          Length = 306

 Score = 58.2 bits (139), Expect = 9e-06
 Identities = 33/101 (32%), Positives = 48/101 (47%)
 Frame = +2

Query: 212 WKLLWKLHVTPKVILFSWKLLLARLTISSFLAKIGLGNAKVCCFCTCGLDDEKHFLLSCS 391
           W  +WKL V PK+ LF WK    R+   S +      NA++C  CT  ++   H L  CS
Sbjct: 107 WLWIWKLKVPPKIKLFVWKCAYHRIPTKSIIFPHANLNARLCPRCT-DIETLIHVLRDCS 165

Query: 392 ATNYVWNFFSNQLNLDFIFRAD*VSGY*IFWLLGFWCLNSS 514
              ++W+ FS+ L +   FR +          L  WC N+S
Sbjct: 166 FARHIWSSFSSHLLISDFFRLE----------LHDWCKNNS 196


Top