BLASTX nr result
ID: Cheilocostus21_contig00044932
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00044932
(764 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009393341.1| PREDICTED: pentatricopeptide repeat-containi... 55 9e-10
ref|XP_010931851.1| PREDICTED: pentatricopeptide repeat-containi... 53 1e-09
ref|XP_008784653.1| PREDICTED: pentatricopeptide repeat-containi... 52 4e-09
ref|XP_020100895.1| pentatricopeptide repeat-containing protein ... 46 5e-07
gb|OAY83741.1| Pentatricopeptide repeat-containing protein, chlo... 46 5e-07
ref|XP_024166319.1| pentatricopeptide repeat-containing protein ... 41 1e-06
>ref|XP_009393341.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Musa acuminata subsp. malaccensis]
Length = 711
Score = 55.1 bits (131), Expect(3) = 9e-10
Identities = 34/75 (45%), Positives = 43/75 (57%)
Frame = -2
Query: 472 LK*GVMVHASNLFDDMSERDNIVPCSTMVSGAAGPAAQEVIFDLFLSSWREASGCHSLRT 293
LK G+MV A +LFDDM +R N V S M+SG + E F+LF W E S S R
Sbjct: 184 LKCGMMVDARHLFDDMPDR-NTVSWSIMISGLVEVGSYEEAFNLFFLMWEEVSDA-SPRM 241
Query: 292 LMTIIRSASDFGFLL 248
TIIR+ + GF+L
Sbjct: 242 FATIIRATAGLGFIL 256
Score = 31.2 bits (69), Expect(3) = 9e-10
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -3
Query: 705 ASNFCIHIEKVAFLKRYDQALNF--*LRSGDRIAA 607
+S F HIEK+ F KRY++AL LRSG + A
Sbjct: 101 SSAFFDHIEKLVFFKRYEEALELFEILRSGGNLVA 135
Score = 25.0 bits (53), Expect(3) = 9e-10
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 575 SLRAADSVLWHMIGESFEFDQQVSER 498
S+R +V HMI F+FDQ + R
Sbjct: 153 SVREVKTVFQHMIETGFKFDQYMRNR 178
>ref|XP_010931851.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Elaeis guineensis]
Length = 718
Score = 53.1 bits (126), Expect(3) = 1e-09
Identities = 32/72 (44%), Positives = 42/72 (58%)
Frame = -2
Query: 472 LK*GVMVHASNLFDDMSERDNIVPCSTMVSGAAGPAAQEVIFDLFLSSWREASGCHSLRT 293
LK G++ A LFD+M ER NIV +TM++G + E FDLFL W E SG R
Sbjct: 190 LKCGMLADARRLFDEMPER-NIVSWNTMITGLVDSGSYEEAFDLFLLMWWETSGV-GPRM 247
Query: 292 LMTIIRSASDFG 257
TIIR+++ G
Sbjct: 248 FATIIRASAGLG 259
Score = 29.6 bits (65), Expect(3) = 1e-09
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 705 ASNFCIHIEKVAFLKRYDQAL 643
AS C IEK+ F KRY++AL
Sbjct: 108 ASGLCSQIEKLVFFKRYEEAL 128
Score = 28.1 bits (61), Expect(3) = 1e-09
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 587 ICLKSLRAADSVLWHMIGESFEFDQQVSER 498
I L S+RA +V HM FEFDQ + R
Sbjct: 155 INLGSVRAVKTVFLHMTESGFEFDQYMRNR 184
>ref|XP_008784653.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Phoenix dactylifera]
ref|XP_008784654.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Phoenix dactylifera]
ref|XP_008784656.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Phoenix dactylifera]
ref|XP_017697403.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Phoenix dactylifera]
ref|XP_017697404.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Phoenix dactylifera]
ref|XP_017697405.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Phoenix dactylifera]
ref|XP_017697406.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Phoenix dactylifera]
Length = 709
Score = 52.0 bits (123), Expect(3) = 4e-09
Identities = 30/72 (41%), Positives = 41/72 (56%)
Frame = -2
Query: 472 LK*GVMVHASNLFDDMSERDNIVPCSTMVSGAAGPAAQEVIFDLFLSSWREASGCHSLRT 293
LK G++ A LFD+M ER NIV +TM++G + E FDLF WRE S R
Sbjct: 181 LKCGMLADARRLFDEMPER-NIVSLNTMITGLVDSGSYEEAFDLFFLMWRELSDA-GPRM 238
Query: 292 LMTIIRSASDFG 257
T+IR+++ G
Sbjct: 239 FATVIRASAGLG 250
Score = 28.9 bits (63), Expect(3) = 4e-09
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3
Query: 705 ASNFCIHIEKVAFLKRYDQAL 643
AS C IEK+ F KRY++AL
Sbjct: 99 ASGLCGQIEKLVFFKRYEEAL 119
Score = 28.1 bits (61), Expect(3) = 4e-09
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 581 LKSLRAADSVLWHMIGESFEFDQQVSER 498
L+S+ A +V HMI FEFDQ + R
Sbjct: 148 LRSVGAVKTVFRHMIESGFEFDQYMRNR 175
>ref|XP_020100895.1| pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Ananas comosus]
Length = 708
Score = 46.2 bits (108), Expect(3) = 5e-07
Identities = 27/72 (37%), Positives = 42/72 (58%)
Frame = -2
Query: 472 LK*GVMVHASNLFDDMSERDNIVPCSTMVSGAAGPAAQEVIFDLFLSSWREASGCHSLRT 293
LK G++V A LFD+M ER + V +TM++G + E F+LFL +W+E R
Sbjct: 181 LKCGMLVDARRLFDEMPER-SAVSWTTMITGLIDAGSYEEAFELFLLTWQEQLDA-GPRM 238
Query: 292 LMTIIRSASDFG 257
T++R+A+ G
Sbjct: 239 FATVVRAAAGVG 250
Score = 30.0 bits (66), Expect(3) = 5e-07
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1
Query: 587 ICLKSLRAADSVLWHMIGESFEFDQQVSER 498
I L S+RAA V HM+ FEFDQ + R
Sbjct: 146 IGLGSIRAAKMVFRHMLDTDFEFDQYMRNR 175
Score = 25.4 bits (54), Expect(3) = 5e-07
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 711 TPASNFCIHIEKVAFLKRYDQAL 643
T +S+ C IEK F RY++AL
Sbjct: 97 TGSSSLCDQIEKWVFFGRYEEAL 119
>gb|OAY83741.1| Pentatricopeptide repeat-containing protein, chloroplastic [Ananas
comosus]
Length = 668
Score = 46.2 bits (108), Expect(3) = 5e-07
Identities = 27/72 (37%), Positives = 42/72 (58%)
Frame = -2
Query: 472 LK*GVMVHASNLFDDMSERDNIVPCSTMVSGAAGPAAQEVIFDLFLSSWREASGCHSLRT 293
LK G++V A LFD+M ER + V +TM++G + E F+LFL +W+E R
Sbjct: 181 LKCGMLVDARRLFDEMPER-SAVSWTTMITGLIDAGSYEEAFELFLLTWQEQLDA-GPRM 238
Query: 292 LMTIIRSASDFG 257
T++R+A+ G
Sbjct: 239 FATVVRAAAGVG 250
Score = 30.0 bits (66), Expect(3) = 5e-07
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -1
Query: 587 ICLKSLRAADSVLWHMIGESFEFDQQVSER 498
I L S+RAA V HM+ FEFDQ + R
Sbjct: 146 IGLGSIRAAKMVFRHMLDTDFEFDQYMRNR 175
Score = 25.4 bits (54), Expect(3) = 5e-07
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 711 TPASNFCIHIEKVAFLKRYDQAL 643
T +S+ C IEK F RY++AL
Sbjct: 97 TGSSSLCDQIEKWVFFGRYEEAL 119
>ref|XP_024166319.1| pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Rosa chinensis]
gb|PRQ23996.1| putative tetratricopeptide-like helical domain, DYW
domain-containing protein [Rosa chinensis]
Length = 708
Score = 41.2 bits (95), Expect(3) = 1e-06
Identities = 26/74 (35%), Positives = 40/74 (54%)
Frame = -2
Query: 472 LK*GVMVHASNLFDDMSERDNIVPCSTMVSGAAGPAAQEVIFDLFLSSWREASGCHSLRT 293
+K G+M+ A +LF++M ER N V +T++ G F LFL W E S S R
Sbjct: 182 VKCGMMIDARHLFEEMPER-NSVSWNTIIGGLVDCGEFVEAFGLFLDMWEEFSDGES-RI 239
Query: 292 LMTIIRSASDFGFL 251
T+IR+++ G +
Sbjct: 240 FATMIRASAGLGLI 253
Score = 30.0 bits (66), Expect(3) = 1e-06
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 587 ICLKSLRAADSVLWHMIGESFEFDQQVSER 498
I LKS+R V +MIG FE DQ + R
Sbjct: 147 ISLKSIRGVKRVFGYMIGNGFELDQYMRNR 176
Score = 28.9 bits (63), Expect(3) = 1e-06
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 720 QMLTPASNFCIHIEKVAFLKRYDQAL 643
Q+ P+S C IEK+ KRY +AL
Sbjct: 95 QIAVPSSGICSQIEKLVLYKRYREAL 120