BLASTX nr result

ID: Cheilocostus21_contig00044854 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00044854
         (464 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009387980.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...    55   5e-06

>ref|XP_009387980.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Musa acuminata
           subsp. malaccensis]
          Length = 416

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 35/72 (48%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
 Frame = -1

Query: 215 QSEREQRGVERQPSTRAGYFSRPQLGFLERQGSALRAEASPRPLDRR-SQLIKKYSYIPD 39
           QS+   R   R PS R G  +RP         +A       R LDRR SQLI+KY++IPD
Sbjct: 21  QSQPSMRRSSRDPSERQGTTTRP---------AASGPSTDHRSLDRRRSQLIQKYAFIPD 71

Query: 38  YYTSLDQVTAAL 3
            YTS+DQVTAAL
Sbjct: 72  NYTSVDQVTAAL 83


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