BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00044628
         (2392 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY74722.1| putative ribonuclease H protein [Ananas comosus]        84   7e-35
ref|XP_020096969.1| uncharacterized protein LOC109716078, partia...    84   8e-35
ref|XP_020088996.1| uncharacterized protein LOC109710675 [Ananas...    73   2e-26
gb|KYP65324.1| Putative ribonuclease H protein At1g65750 family ...    67   1e-18
gb|PNX94425.1| ribonuclease H, partial [Trifolium pratense]            97   1e-16
gb|OMO80909.1| reverse transcriptase [Corchorus capsularis]            94   1e-15
gb|PKA46284.1| Putative ribonuclease H protein [Apostasia shenzh...    66   3e-15
gb|OAY77744.1| putative ribonuclease H protein [Ananas comosus]        84   4e-14
gb|KYP70239.1| Putative ribonuclease H protein At1g65750 family ...    83   6e-14
gb|KYP45885.1| Putative ribonuclease H protein At1g65750 family ...    82   4e-13
ref|XP_021666740.1| uncharacterized protein LOC110654914 [Hevea ...    85   4e-13
gb|PRQ45578.1| putative RNA-directed DNA polymerase [Rosa chinen...    82   8e-13
gb|OAY76175.1| putative ribonuclease H protein [Ananas comosus]        83   9e-13
gb|OAY83559.1| putative ribonuclease H protein, partial [Ananas ...    83   2e-12
ref|XP_024190144.1| uncharacterized protein LOC112194121 [Rosa c...    82   2e-12
gb|PNY14872.1| ribonuclease H, partial [Trifolium pratense]            64   3e-12
ref|XP_008776257.1| PREDICTED: uncharacterized protein LOC103696...    52   4e-12
gb|PRQ33081.1| putative RNA-directed DNA polymerase [Rosa chinen...    82   4e-12
gb|PKA53799.1| Putative ribonuclease H protein [Apostasia shenzh...    82   4e-12
ref|XP_016195172.1| uncharacterized protein LOC107636160 [Arachi...    78   5e-12

>gb|OAY74722.1| putative ribonuclease H protein [Ananas comosus]
          Length = 851

 Score = 84.0 bits (206), Expect(4) = 7e-35
 Identities = 43/126 (34%), Positives = 69/126 (54%)
 Frame = -2

Query: 1299 KRQVLQSLQFKEGLFPFKYLGAFIAPSPPSKATSRDVLSKLHSHLSNWKSILLSQAGQAT 1120
            K  V + L   +G  PFKYLG+ I+        S  ++ ++ S L++WK   LS AG+A 
Sbjct: 225  KNMVTRWLNLPKGTMPFKYLGSQISGKRVKVEQSNFLVERVRSKLTSWKKNALSLAGRAI 284

Query: 1119 LINSTILSTSIHALTPSWIPRTHTDNFNKVSCQFLWANLYPKKGLHLISWNLVISPKDSD 940
            LI +T+ +   + +T SWIP +  D   ++  +FLW     KKG+HLI+W+ +  P    
Sbjct: 285  LIRATLTAIPNYWMTASWIPDSVVDKITQIIRKFLWEKHGGKKGMHLIAWDNITKPLTEG 344

Query: 939  GLIIKD 922
            GL  ++
Sbjct: 345  GLSFRN 350



 Score = 83.2 bits (204), Expect(4) = 7e-35
 Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 1/176 (0%)
 Frame = -2

Query: 696 LNHAWCLDLSLSHKPSFFNVSYANRSLLVSNFLQEGSWRVQHIQAFSGPELSKIILGTPL 517
           L H W      S KP+F   +   +   ++  ++ G W    I+   G +L   I    L
Sbjct: 427 LEHPWLFTTPFSKKPTFIATNIGEKVQHINQIIENGEWCYNSIEGLVGEDLVDAITNLQL 486

Query: 516 PNLPDDDKWIWREDLLGCSFNNSAYDYLLRERLALEDPC-VGWRCLWSLAVTPRIKIFGW 340
              P  DKW+W     G +   S Y +L        D C  GW+ LW LAV PR+K F W
Sbjct: 487 GEGP--DKWVWSLHPQGKARAGSVYSFLNGH----TDNCWDGWKQLWGLAVAPRVKTFLW 540

Query: 339 KXXXXXXXXXXXLVKFRIDNAILCCFCKCDLDSIDHIFFRCVYAG*IFFIAF*VDW 172
           K           L +  +  + LC  C    ++I H+FF+C Y+  ++ I F +DW
Sbjct: 541 KYFWKRLPTKDFLQQRGLTQSNLCALCGEAAENIQHLFFQCRYSKEVWHI-FQLDW 595



 Score = 28.9 bits (63), Expect(4) = 7e-35
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -3

Query: 884 VLNHKNSIWVNLVNAKYGSIDPXXXXXXXXXXXSCRGLIKDMRALRNG 741
           +LN+ N  WV ++  KYG +DP           + R L   ++A++ G
Sbjct: 366 LLNNINLPWVRIMKGKYGELDPWKNPKLTTTSWAWRALNYTVQAIKLG 413



 Score = 23.5 bits (49), Expect(4) = 7e-35
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 143 YDGSWIFL-LPT*A-SLILTMFWHLWKARNDIIFN 45
           +DG W+   +P    ++I ++ W +WK+R   +FN
Sbjct: 605 HDGCWLTSKVPNDLKAMIASILWCIWKSRCATLFN 639


>ref|XP_020096969.1| uncharacterized protein LOC109716078, partial [Ananas comosus]
          Length = 1220

 Score = 83.6 bits (205), Expect(4) = 8e-35
 Identities = 43/122 (35%), Positives = 67/122 (54%)
 Frame = -2

Query: 1299 KRQVLQSLQFKEGLFPFKYLGAFIAPSPPSKATSRDVLSKLHSHLSNWKSILLSQAGQAT 1120
            K  V + L   +G  PFKYLG+ I+        S  ++ ++ S L++WK   LS AG+A 
Sbjct: 752  KNMVTRWLNLPKGTMPFKYLGSQISGKRVKVEQSNFLVERVRSKLTSWKKNALSLAGRAI 811

Query: 1119 LINSTILSTSIHALTPSWIPRTHTDNFNKVSCQFLWANLYPKKGLHLISWNLVISPKDSD 940
            LI +T+ +   + +T SWIP +  D   ++  +FLW     KKG+HLI+W+ +  P    
Sbjct: 812  LIRATLTAIPNYWMTASWIPDSVVDKITQIIRKFLWEKHGGKKGMHLIAWDNITKPLTEG 871

Query: 939  GL 934
            GL
Sbjct: 872  GL 873



 Score = 83.2 bits (204), Expect(4) = 8e-35
 Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 1/176 (0%)
 Frame = -2

Query: 696  LNHAWCLDLSLSHKPSFFNVSYANRSLLVSNFLQEGSWRVQHIQAFSGPELSKIILGTPL 517
            L H W      S KP+F   +   +   ++  ++ G W    I+   G +L   I    L
Sbjct: 954  LEHPWLFTTPFSKKPTFIATNIGEKVQHINQIIENGEWCYNSIEGLVGEDLVDAITNLQL 1013

Query: 516  PNLPDDDKWIWREDLLGCSFNNSAYDYLLRERLALEDPC-VGWRCLWSLAVTPRIKIFGW 340
               P  DKW+W     G +   S Y +L        D C  GW+ LW LAV PR+K F W
Sbjct: 1014 GEGP--DKWVWSLHPQGKARAGSVYSFLNGH----TDNCWDGWKQLWGLAVAPRVKTFLW 1067

Query: 339  KXXXXXXXXXXXLVKFRIDNAILCCFCKCDLDSIDHIFFRCVYAG*IFFIAF*VDW 172
            K           L +  +  + LC  C    ++I H+FF+C Y+  ++ I F +DW
Sbjct: 1068 KYFWKRLPTKDFLQQRGLTQSNLCALCGEAAENIQHLFFQCRYSKEVWHI-FQLDW 1122



 Score = 28.9 bits (63), Expect(4) = 8e-35
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -3

Query: 884  VLNHKNSIWVNLVNAKYGSIDPXXXXXXXXXXXSCRGLIKDMRALRNG 741
            +LN+ N  WV ++  KYG +DP           + R L   ++A++ G
Sbjct: 893  LLNNINLPWVRIMKGKYGELDPWKNPKLTTTSWAWRALNYTVQAIKLG 940



 Score = 23.5 bits (49), Expect(4) = 8e-35
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 143  YDGSWIFL-LPT*A-SLILTMFWHLWKARNDIIFN 45
            +DG W+   +P    ++I ++ W +WK+R   +FN
Sbjct: 1132 HDGCWLTSKVPNDLKAMIASILWCIWKSRCATLFN 1166


>ref|XP_020088996.1| uncharacterized protein LOC109710675 [Ananas comosus]
          Length = 1113

 Score = 72.8 bits (177), Expect(4) = 2e-26
 Identities = 42/129 (32%), Positives = 67/129 (51%)
 Frame = -2

Query: 1308 RNSKRQVLQSLQFKEGLFPFKYLGAFIAPSPPSKATSRDVLSKLHSHLSNWKSILLSQAG 1129
            R+ KR++ + L  +EG  P  YLG  +           D  +K+ S L++WK   LSQAG
Sbjct: 484  RDLKRRIHRKLGMQEGSIPLTYLGIKLGYGKQLLRDYDDFQAKVDSRLASWKRNSLSQAG 543

Query: 1128 QATLINSTILSTSIHALTPSWIPRTHTDNFNKVSCQFLWANLYPKKGLHLISWNLVISPK 949
            +  LINS + + S H      + +  T++ ++    FLW     KK LHL+ W+ V + +
Sbjct: 544  RLVLINSVLGAMSNHIFANFAVSKGVTNSLSRKIRDFLWEKRNNKKSLHLLKWDSVTTAR 603

Query: 948  DSDGLIIKD 922
             + GL I+D
Sbjct: 604  VNGGLGIRD 612



 Score = 63.2 bits (152), Expect(4) = 2e-26
 Identities = 42/164 (25%), Positives = 65/164 (39%)
 Frame = -2

Query: 699  ILNHAWCLDLSLSHKPSFFNVSYANRSLLVSNFLQEGSWRVQHIQAFSGPELSKIILGTP 520
            I +  W   + LS KP++ N++       V+  ++ G+W    +  + GP L+  I    
Sbjct: 690  IWDDPWIFSIPLSWKPTYINMNVRFGKKKVARLIRAGNWNYDRLVEWFGPILAHNICKII 749

Query: 519  LPNLPDDDKWIWREDLLGCSFNNSAYDYLLRERLALEDPCVGWRCLWSLAVTPRIKIFGW 340
            L      D+WIW     G     S Y ++ +     +     W  LWSL V PR+K F W
Sbjct: 750  LSPDNGSDEWIWAPKKDGKPSVKSIYHHINQGFYVPQ--ATKWIVLWSLPVAPRVKNFLW 807

Query: 339  KXXXXXXXXXXXLVKFRIDNAILCCFCKCDLDSIDHIFFRCVYA 208
            K                   +  C +C    D  +HIF  C+ A
Sbjct: 808  KLLWNRLPTNERCYSLNSAPSPFCIYCSTPEDQ-NHIFLDCINA 850



 Score = 29.6 bits (65), Expect(4) = 2e-26
 Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 8/64 (12%)
 Frame = -3

Query: 227  FLDVFMLDRFFSSLSELIGIDFNAFSGWYDGSWIFLLPT*A--------SLILTMFWHLW 72
            FLD     R + ++    GI F+    W    WI      A        +LI   FW +W
Sbjct: 844  FLDCINARRIWDAVMSSTGILFSFNGDWITEEWIDEGKNLAVVQQQFIRALIANTFWQIW 903

Query: 71   KARN 60
            K RN
Sbjct: 904  KERN 907



 Score = 25.0 bits (53), Expect(4) = 2e-26
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 884 VLNHKNSIWVNLVNAKYGSIDP 819
           VLN+   +WV LV  KY    P
Sbjct: 628 VLNNNEPLWVKLVRDKYRGFHP 649


>gb|KYP65324.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 729

 Score = 66.6 bits (161), Expect(4) = 1e-18
 Identities = 33/109 (30%), Positives = 57/109 (52%)
 Frame = -2

Query: 1248 KYLGAFIAPSPPSKATSRDVLSKLHSHLSNWKSILLSQAGQATLINSTILSTSIHALTPS 1069
            +YLG  +       A    V+ +++  L+ WK  LL++AG+  LINS + S  ++++   
Sbjct: 143  RYLGIPMFHGKAKIADFHHVIDRINDCLATWKGRLLNKAGRLCLINSVVTSIPLYSMQSL 202

Query: 1068 WIPRTHTDNFNKVSCQFLWANLYPKKGLHLISWNLVISPKDSDGLIIKD 922
            W+P+   +  N+ S   LWA     +   L+ WN V  PK+  GL I++
Sbjct: 203  WLPQAVCNRINQASRTMLWAKAGSSRYWSLVGWNTVTRPKEFGGLGIRE 251



 Score = 50.4 bits (119), Expect(4) = 1e-18
 Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 1/145 (0%)
 Frame = -2

Query: 639 VSYANRSLLVSNFLQEGSWRVQHIQAFSGPELSKIILGTPLPNLP-DDDKWIWREDLLGC 463
           V  ++   +V++  Q+G+W    +      EL   I   P+P+ P   D + W  D  GC
Sbjct: 345 VHISDTDRIVAHCWQQGAWNFDSLFTRLPMELVNRIQQVPIPSSPAGADMFSWAGDSSGC 404

Query: 462 SFNNSAYDYLLRERLALEDPCVGWRCLWSLAVTPRIKIFGWKXXXXXXXXXXXLVKFRID 283
               S + +L      L DP   W+ +W L V  +IK   W+                +D
Sbjct: 405 YTAASGFRFLFSPDHGLADPV--WKRVWKLHVPEKIKFLLWQGLHSSIPTNHFCSLRHLD 462

Query: 282 NAILCCFCKCDLDSIDHIFFRCVYA 208
           +   C  C C  ++I H    C ++
Sbjct: 463 SVGSCPRCSCPQETILHAIRDCPHS 487



 Score = 23.9 bits (50), Expect(4) = 1e-18
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = -3

Query: 146 WYDGSWIFLLPT*ASLILTMFWHLWKARNDIIFN 45
           W+ G  +   P    L + ++W +W+ RN+++F+
Sbjct: 510 WFKG--VITNPASKKLAIVIWW-IWRLRNNMVFH 540



 Score = 22.7 bits (47), Expect(4) = 1e-18
 Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
 Frame = -3

Query: 887 DVLNHKNSIWVNLVNAKY-GSIDPXXXXXXXXXXXSCRGLIKDMRALRNGFFKK 729
           D+L+     WV ++ AKY                     ++K +  LR GFF K
Sbjct: 266 DLLHSPQKPWVKILQAKYLHGASVLQAKKANGASQVWNSIVKALPYLRQGFFPK 319


>gb|PNX94425.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1176

 Score = 96.7 bits (239), Expect = 1e-16
 Identities = 93/379 (24%), Positives = 150/379 (39%), Gaps = 18/379 (4%)
 Frame = -2

Query: 1290 VLQSLQFKEGLFPFKYLGAFIAPSPPSKATSRDVLSKLHSHLSNWKSILLSQAGQATLIN 1111
            ++  L+FK G  PF YLG  +    P  +  + +  K+HS LS WK+ LLS AG+  L+ 
Sbjct: 679  IVNLLKFKLGTLPFNYLGVPLFKGKPKASWLQPIADKIHSKLSAWKASLLSMAGRVQLVR 738

Query: 1110 STILSTSIHALTPSWIPRTHTDNFNKVSCQFLWANLYPKKGLHLISWNLVISPKDSDGLI 931
            S + S  I+++T    P +      K    F+W+    K+ L  I+W  +  P    GL 
Sbjct: 739  SVVQSMLIYSITLYSWPASLIKKIEKDVKNFIWSGDVDKRKLVTIAWKKLCRPFSQGGLN 798

Query: 930  IKDFSYLYVASNAKGCPQP*E*HLG*PGQC*IW-------FY*PLVSFR-------IQFH 793
            I+  S L  ASN K C                W        +  L+  R       I  H
Sbjct: 799  IRSLSNLNKASNLKLC----------------WSLFNSQSSWAKLLQARVLRGRKIIHHH 842

Query: 792  VLEL*GLD*RHEGSQEWFLQXXXXXXXXXXNILNHAWCLDLSLSHKPSFFNV-SYANRSL 616
            +        + E S  +             N  N  WC  +        FN+ S+ +++L
Sbjct: 843  IFSSIWSSIKEETSTIFENSIWLLGTGTDINFWNDNWCGSI----LSEVFNIPSHISQAL 898

Query: 615  --LVSNFLQEGSWRVQHIQAFSGPELSKIILGTPLPNLPDDDKWIWREDLLGCSFNNSAY 442
               VS+++  G W +    +     +S ++    +P +P  DK +W+    G    N AY
Sbjct: 899  TSTVSDYIHNGQWNLPPQLSRQFTAISFLVHQVTIPTVPSKDKLLWKHTDSGELQMNDAY 958

Query: 441  DYLLRERLALEDPCVGW-RCLWSLAVTPRIKIFGWKXXXXXXXXXXXLVKFRIDNAILCC 265
             + ++    L+D  + W + +WS  + P   I  W+           L         +C 
Sbjct: 959  CFKMQ---PLQD--LHWAKVIWSPDIPPSKSILAWRLMHNKVPTDENLKSRGCYLPSMCN 1013

Query: 264  FCKCDLDSIDHIFFRCVYA 208
             C    +S  HIFF C +A
Sbjct: 1014 LCCKSEESSFHIFFECEFA 1032


>gb|OMO80909.1| reverse transcriptase [Corchorus capsularis]
          Length = 2568

 Score = 93.6 bits (231), Expect = 1e-15
 Identities = 56/148 (37%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
 Frame = -2

Query: 1320 INYARNS----KRQVLQSLQFKEGLFPFKYLGAFIAPSPPSKATSRDVLSKLHSHLSNWK 1153
            I ++RN+    K  +  +L F+      KYLG  I+   PSK T   ++ K+++ L+ WK
Sbjct: 2095 ILFSRNTDPVLKNAIADNLGFEAVKDLGKYLGFPISNKRPSKQTCHFIIEKINNKLAGWK 2154

Query: 1152 SILLSQAGQATLINSTILSTSIHALTPSWIPRTHTDNFNKVSCQFLWANLYPKKGLHLIS 973
            S  LS AG ATLINSTI STS + +    +P    +  + +   FLW +   KK LHLIS
Sbjct: 2155 SKFLSLAGIATLINSTIFSTSAYYMQAMKLPAATLNQIDSICKNFLWGSTAEKKKLHLIS 2214

Query: 972  WNLVISPKDSDGLIIKDFSYLYVASNAK 889
            W +    KD  GL +K+  +L +A  AK
Sbjct: 2215 WEIATLHKDQGGLSLKEAKHLNLAYMAK 2242


>gb|PKA46284.1| Putative ribonuclease H protein [Apostasia shenzhenica]
          Length = 1186

 Score = 66.2 bits (160), Expect(3) = 3e-15
 Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
 Frame = -2

Query: 1290 VLQSLQFKEGLFPFKYLGA-FIAPSPPSKATSRDVLSKLHSHLSNWKSILLSQAGQATLI 1114
            V+  +Q     F F  L + +I  + P K    +++SK+ S +S W   +LS AG+ TLI
Sbjct: 551  VMACIQCPRFAFMFNGLKSPWITAAKPVKNDFANLISKIRSQISLWGVRMLSLAGRLTLI 610

Query: 1113 NSTILSTSIHALTPSWIPRTHTDNFNKVSCQFLWANLYPKKGLHLISWNLVISPKDSDGL 934
            NS + S  ++ ++ +++P++      ++   FLW       GLH ++W  +  PK + GL
Sbjct: 611  NSVLSSIPVYVMSHTFVPQSVLYAIEQIIRHFLWNGTVNHYGLHYVNWEKIAKPKLAGGL 670

Query: 933  IIKDFS 916
             I  FS
Sbjct: 671  GIHQFS 676



 Score = 43.9 bits (102), Expect(3) = 3e-15
 Identities = 37/168 (22%), Positives = 62/168 (36%)
 Frame = -2

Query: 699  ILNHAWCLDLSLSHKPSFFNVSYANRSLLVSNFLQEGSWRVQHIQAFSGPELSKIILGTP 520
            +L+  W  ++ +   P+F N +  +    VS FLQ G W    +       L K I   P
Sbjct: 749  VLHDPWITNVPIIRWPTFIN-TLRDPPDHVSEFLQNGIWNETKLLQHFDAALVKRITSLP 807

Query: 519  LPNLPDDDKWIWREDLLGCSFNNSAYDYLLRERLALEDPCVGWRCLWSLAVTPRIKIFGW 340
                   D W+W+         +  Y  L     ++      W  +W L   PR + F W
Sbjct: 808  CLQNSAHDIWVWQSTETEKPPTSQVYKNL----FSVSGCHTAW--VWKLRTQPRFQTFLW 861

Query: 339  KXXXXXXXXXXXLVKFRIDNAILCCFCKCDLDSIDHIFFRCVYAG*IF 196
            +           L   R+     C +   + +++ HIF  C +A  +F
Sbjct: 862  RVCMDSLPTFDWLTSRRLSVIQNCPWGCAEPENLSHIFCNCPFAKNVF 909



 Score = 22.3 bits (46), Expect(3) = 3e-15
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 878 NHKNSIWVNLVNAKYGSIDP 819
           NH+ ++WV    AKYG+ +P
Sbjct: 693 NHQ-TLWVPFFQAKYGNRNP 711


>gb|OAY77744.1| putative ribonuclease H protein [Ananas comosus]
          Length = 241

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 48/121 (39%), Positives = 64/121 (52%)
 Frame = -2

Query: 1263 GLFPFKYLGAFIAPSPPSKATSRDVLSKLHSHLSNWKSILLSQAGQATLINSTILSTSIH 1084
            G FPF YLG  I+P     +   D+L K +  L++WK  LLSQAG+  LI ST+ +   +
Sbjct: 9    GSFPFTYLGVKISPRKLRASDCNDLLVKTNKKLAHWKRDLLSQAGRLVLIKSTLSAIPTY 68

Query: 1083 ALTPSWIPRTHTDNFNKVSCQFLWANLYPKKGLHLISWNLVISPKDSDGLIIKDFSYLYV 904
             L+   IP    D   K+   FLW      KGLHLISW  V +  ++ GL I+D   L  
Sbjct: 69   WLSNCTIPLGMVDQLTKIMRSFLWEKSDCTKGLHLISWGKVTNATNAGGLGIRDLRTLQP 128

Query: 903  A 901
            A
Sbjct: 129  A 129


>gb|KYP70239.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 1157

 Score = 82.8 bits (203), Expect(2) = 6e-14
 Identities = 43/141 (30%), Positives = 75/141 (53%)
 Frame = -2

Query: 1305 NSKRQVLQSLQFKEGLFPFKYLGAFIAPSPPSKATSRDVLSKLHSHLSNWKSILLSQAGQ 1126
            N   ++  S  F++     KYLG  +  S  ++AT   ++ K+   L+NWK+  LS AG+
Sbjct: 834  NVINEISSSFSFQQAENLGKYLGIPLHHSRVNRATYSGIIEKVTQRLNNWKAKSLSFAGR 893

Query: 1125 ATLINSTILSTSIHALTPSWIPRTHTDNFNKVSCQFLWANLYPKKGLHLISWNLVISPKD 946
             TL  S + +   + +   W+PR   D+ +K + QFLW +    K +H +SW+++  PK+
Sbjct: 894  LTLTKSFLTALPSYTMQTVWLPRNICDDIDKKNRQFLWGDTSHNKKVHTVSWSVICQPKN 953

Query: 945  SDGLIIKDFSYLYVASNAKGC 883
              GL I++   + +A   K C
Sbjct: 954  QGGLGIRNMRDMNMAFMMKNC 974



 Score = 25.8 bits (55), Expect(2) = 6e-14
 Identities = 7/21 (33%), Positives = 16/21 (76%)
 Frame = -3

Query: 884  VLNHKNSIWVNLVNAKYGSID 822
            ++  K+ +WV ++++KYG +D
Sbjct: 977  MITEKDKLWVQVLSSKYGCLD 997


>gb|KYP45885.1| Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 1192

 Score = 82.0 bits (201), Expect(2) = 4e-13
 Identities = 42/141 (29%), Positives = 74/141 (52%)
 Frame = -2

Query: 1305 NSKRQVLQSLQFKEGLFPFKYLGAFIAPSPPSKATSRDVLSKLHSHLSNWKSILLSQAGQ 1126
            N + ++  S  F+      KYLG  +  S  ++AT   ++ K+   L+NWK+  LS AG+
Sbjct: 819  NVRNEISSSFGFQRAENLGKYLGIPLHHSRVNRATHSGIIEKVTQRLNNWKAKSLSFAGR 878

Query: 1125 ATLINSTILSTSIHALTPSWIPRTHTDNFNKVSCQFLWANLYPKKGLHLISWNLVISPKD 946
             TL  S + +   + +   W+PR   D+ +K + QFLW +    K +H +SW+++  PK+
Sbjct: 879  LTLTKSVLTALPSYTMQTVWLPRNICDDIDKKNRQFLWGDTSHNKKVHTVSWSVICQPKN 938

Query: 945  SDGLIIKDFSYLYVASNAKGC 883
               L I++   + +A   K C
Sbjct: 939  QGALGIRNMRDMNMAFMMKNC 959



 Score = 23.9 bits (50), Expect(2) = 4e-13
 Identities = 6/21 (28%), Positives = 15/21 (71%)
 Frame = -3

Query: 884  VLNHKNSIWVNLVNAKYGSID 822
            ++   + +WV ++++KYG +D
Sbjct: 962  MITENDKLWVQVLSSKYGCLD 982


>ref|XP_021666740.1| uncharacterized protein LOC110654914 [Hevea brasiliensis]
          Length = 653

 Score = 84.7 bits (208), Expect = 4e-13
 Identities = 37/92 (40%), Positives = 60/92 (65%)
 Frame = -2

Query: 1209 KATSRDVLSKLHSHLSNWKSILLSQAGQATLINSTILSTSIHALTPSWIPRTHTDNFNKV 1030
            +A+   +L KLHS L+ WK+ LL++AG+ TL+ ST+ +  ++ +   W P T  D+ +++
Sbjct: 332  RASFTHILDKLHSRLAGWKNKLLNKAGRLTLVQSTLSTIPLYTMQTCWFPATVCDDIDRL 391

Query: 1029 SCQFLWANLYPKKGLHLISWNLVISPKDSDGL 934
              +FLW +L   KG+HL+SW  V SPK + GL
Sbjct: 392  CRRFLWGSLDEGKGIHLVSWESVTSPKKAGGL 423


>gb|PRQ45578.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 379

 Score = 82.0 bits (201), Expect = 8e-13
 Identities = 43/120 (35%), Positives = 67/120 (55%)
 Frame = -2

Query: 1248 KYLGAFIAPSPPSKATSRDVLSKLHSHLSNWKSILLSQAGQATLINSTILSTSIHALTPS 1069
            KYLG  +  S  +K T   +  K+ + LS+WKS  LS AG+ TL+NS   S  I+ +  +
Sbjct: 159  KYLGMPLIHSRVNKHTYNGIFDKVQNRLSSWKSKALSMAGRLTLVNSVTSSIPIYTMQTA 218

Query: 1068 WIPRTHTDNFNKVSCQFLWANLYPKKGLHLISWNLVISPKDSDGLIIKDFSYLYVASNAK 889
             +P +  D  +K++  F+W +   +K +HL+SW++V  PK   GL IK    +  A  AK
Sbjct: 219  KLPMSLCDKLDKLNRDFIWGDTTDRKKIHLVSWDVVCQPKQLGGLGIKKTEVMNQAMLAK 278


>gb|OAY76175.1| putative ribonuclease H protein [Ananas comosus]
          Length = 484

 Score = 82.8 bits (203), Expect = 9e-13
 Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
 Frame = -2

Query: 1323 VINYARNSKRQVLQSLQFKEGLFPFKYLGAFIAPSPPSKATSRDVLSKLHSHLSNWKSIL 1144
            V+N A  S   +  SL    G FP  YLG  ++P+         ++ K H  LS WKS L
Sbjct: 24   VVNLAEPSHASLANSLNCSMGHFPLTYLGLPLSPAKLPTCAFNSLIDKFHKRLSGWKSAL 83

Query: 1143 LSQAGQATLINSTILSTSIHALTPSWIPRTHTDNFNKVSCQFLW--ANLYPKKGLHLISW 970
            LS AG+  LINS + +  IH L+   +P+       ++  +FLW  ++   ++G+ L++W
Sbjct: 84   LSPAGRVVLINSVLTNLPIHYLSVFILPKAINHQLGELLRRFLWRKSSCPIREGVPLVTW 143

Query: 969  NLVISPKDSDGLIIKDFSY 913
            ++V  PK   GL I +  Y
Sbjct: 144  DIVARPKALGGLGIANIYY 162


>gb|OAY83559.1| putative ribonuclease H protein, partial [Ananas comosus]
          Length = 652

 Score = 82.8 bits (203), Expect = 2e-12
 Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
 Frame = -2

Query: 1323 VINYARNSKRQVLQSLQFKEGLFPFKYLGAFIAPSPPSKATSRDVLSKLHSHLSNWKSIL 1144
            V+N A  S   +  S     G FP  YLG  ++P+         ++ K H  LS WKS L
Sbjct: 217  VVNLAEPSHASLANSFNCSMGHFPLTYLGLPLSPTKLPTCAFNSLIDKFHKRLSGWKSAL 276

Query: 1143 LSQAGQATLINSTILSTSIHALTPSWIPRTHTDNFNKVSCQFLW--ANLYPKKGLHLISW 970
            LS AG+  LINS + +  IH L+   +P+       ++  +FLW  ++   K+G+ L++W
Sbjct: 277  LSPAGRVVLINSVLTNLPIHYLSIFILPKAINHQLRELQRRFLWRKSSCPIKEGVPLVAW 336

Query: 969  NLVISPKDSDGLIIKDFSY 913
            ++V  PK   GL I +  Y
Sbjct: 337  DIVARPKALGGLGIANIYY 355


>ref|XP_024190144.1| uncharacterized protein LOC112194121 [Rosa chinensis]
          Length = 1002

 Score = 82.0 bits (201), Expect(2) = 2e-12
 Identities = 45/120 (37%), Positives = 68/120 (56%)
 Frame = -2

Query: 1248 KYLGAFIAPSPPSKATSRDVLSKLHSHLSNWKSILLSQAGQATLINSTILSTSIHALTPS 1069
            KYLG  +  S  +K T  +++ K+H  L  WKS  LS AG+ TLINS   S  I+ +  +
Sbjct: 546  KYLGVPLLHSRVTKLTYSEMIDKVHGRLCGWKSKTLSMAGRLTLINSVTASIPIYTMQTA 605

Query: 1068 WIPRTHTDNFNKVSCQFLWANLYPKKGLHLISWNLVISPKDSDGLIIKDFSYLYVASNAK 889
             IP +  D  +K++  FLW +   K+ +HL++W+ V  PK+  GL IK  + +  A  AK
Sbjct: 606  KIPLSTCDALDKLNRDFLWGDSDDKRKIHLVNWDNVCKPKNRGGLGIKRTTDMNKAMLAK 665



 Score = 21.2 bits (43), Expect(2) = 2e-12
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 884 VLNHKNSIWVNLVNAKY 834
           +L + +  W NL  AKY
Sbjct: 670 ILQNDDGFWCNLYKAKY 686


>gb|PNY14872.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1396

 Score = 63.5 bits (153), Expect(3) = 3e-12
 Identities = 33/108 (30%), Positives = 58/108 (53%)
 Frame = -2

Query: 1248 KYLGAFIAPSPPSKATSRDVLSKLHSHLSNWKSILLSQAGQATLINSTILSTSIHALTPS 1069
            KYLG  +      K    DV  ++ + L++WKS LL++ G+  L NS I S   + +  +
Sbjct: 1081 KYLGFKMLHGRIRKLDFVDVYDRVSTKLASWKSRLLNKPGRVVLANSVISSLPAYHMQIN 1140

Query: 1068 WIPRTHTDNFNKVSCQFLWANLYPKKGLHLISWNLVISPKDSDGLIIK 925
            W+P+   D+ ++   +F+W       G+HL+SWN +  P+   GL ++
Sbjct: 1141 WLPQGMCDDLDRTVRRFIWKGT-GDVGMHLVSWNKITQPRRLGGLGVR 1187



 Score = 36.2 bits (82), Expect(3) = 3e-12
 Identities = 23/103 (22%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
 Frame = -2

Query: 639  VSYANRSLLVSNFLQEGSWRVQHIQAFSGPELSKIILGTPLPNLPDD--DKWIWREDLLG 466
            V+  + S  + +   +GSW  Q++     P+ ++  + +  P + +   D W+W+   +G
Sbjct: 1281 VAIQDTSTKIKDVWYDGSWNFQNLYTIV-PDFARKEIVSLQPRIVNGIPDIWVWQSSSVG 1339

Query: 465  CSFNNSAYDYLLRERLALEDPCVGWRCLWSLAVTPRIKIFGWK 337
                  AY++LL E   + +    W+ +W L +   I+ F W+
Sbjct: 1340 IYTVKDAYNWLL-EPSGINNHS-NWQWIWRLTLPASIQFFIWQ 1380



 Score = 22.3 bits (46), Expect(3) = 3e-12
 Identities = 12/50 (24%), Positives = 20/50 (40%)
 Frame = -3

Query: 887  DVLNHKNSIWVNLVNAKYGSIDPXXXXXXXXXXXSCRGLIKDMRALRNGF 738
            ++LN  + +WV L   KY                    + K ++ LR+GF
Sbjct: 1203 EILNSPDKLWVKLFEEKYLKGRLIFKASVSGGSVIWNSVAKSIQRLRDGF 1252


>ref|XP_008776257.1| PREDICTED: uncharacterized protein LOC103696422 [Phoenix dactylifera]
          Length = 712

 Score = 52.4 bits (124), Expect(3) = 4e-12
 Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
 Frame = -2

Query: 1302 SKRQVLQSLQFKEGLFPFKYLGAFIAPSPPSKATSRDVLS---KLHSHLSNWKSILLSQA 1132
            ++  +L+ L   E      YLG    P    +   RD  +    +   L  W++  LS  
Sbjct: 249  ARHSILEILGVGEQEGTMTYLGI---PISGRRLRIRDCTALELSIRRRLEGWQAHTLSMM 305

Query: 1131 GQATLINSTILSTSIHALTPSWIPRTHTDNFNKVSCQFLWANLYPKKGLHLISWNLVISP 952
            G+ TL+ S + S  I+ L+ + IP     +  ++   F+W     + G+HL++W +V  P
Sbjct: 306  GRITLVRSVLTSVPIYLLSNAIIPVAVLRSLEQLFRSFIWGRRGGRDGIHLVAWEVVCQP 365

Query: 951  KDSDGL 934
              S GL
Sbjct: 366  TGSGGL 371



 Score = 45.4 bits (106), Expect(3) = 4e-12
 Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 11/172 (6%)
 Frame = -2

Query: 699 ILNHAWCLDLSLSHKPSFFNVSYANRSLLVSNFL--QEGSWRVQHIQAFSGPELSKIILG 526
           +L  +W  +  +   P+  + S       VS+ L  + G WR + I+   G +L++++L 
Sbjct: 450 VLEDSWVTEQPMCRMPTMVD-SARLAGWRVSDLLDSEAGGWREELIRETFGEQLAELVLT 508

Query: 525 TPLPNLPDDDKWIWRE---------DLLGCSFNNSAYDYLLRERLALEDPCVGWRCLWSL 373
            P+P   + D+ +W           DLLG         +       +ED   GW  +W L
Sbjct: 509 LPVPIGGESDRLVWMPTGRLRVRAIDLLGL--------FRSEPDRQIED---GW--IWRL 555

Query: 372 AVTPRIKIFGWKXXXXXXXXXXXLVKFRIDNAILCCFCKCDLDSIDHIFFRC 217
            + PR+ +F WK           LV   +  +  C  C    ++I+H+  +C
Sbjct: 556 RIHPRVALFIWKVAWGCLPTRSLLVHRGMRISQCCEVCADVEETIEHVLVQC 607



 Score = 24.3 bits (51), Expect(3) = 4e-12
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 866 SIWVNLVNAKYGSIDP 819
           S+W +L+ AKYG++ P
Sbjct: 397 SMWASLMRAKYGALVP 412


>gb|PRQ33081.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1367

 Score = 82.0 bits (201), Expect = 4e-12
 Identities = 43/120 (35%), Positives = 67/120 (55%)
 Frame = -2

Query: 1248 KYLGAFIAPSPPSKATSRDVLSKLHSHLSNWKSILLSQAGQATLINSTILSTSIHALTPS 1069
            KYLG  +  S  +K T   +  K+ + LS+WKS  LS AG+ TL+NS   S  I+ +  +
Sbjct: 748  KYLGMPLIHSRVNKHTYNGIFDKVQNRLSSWKSKALSMAGRLTLVNSVTSSIPIYTMQTA 807

Query: 1068 WIPRTHTDNFNKVSCQFLWANLYPKKGLHLISWNLVISPKDSDGLIIKDFSYLYVASNAK 889
             +P +  D  +K++  F+W +   +K +HL+SW++V  PK   GL IK    +  A  AK
Sbjct: 808  KLPMSLCDKLDKLNRDFIWGDTTDRKKIHLVSWDVVCQPKQLGGLGIKKTEVMNQAMLAK 867


>gb|PKA53799.1| Putative ribonuclease H protein [Apostasia shenzhenica]
          Length = 882

 Score = 81.6 bits (200), Expect = 4e-12
 Identities = 93/407 (22%), Positives = 151/407 (37%), Gaps = 36/407 (8%)
 Frame = -2

Query: 1308 RNSKRQVLQSLQFKEGLFPFKYLGAFIAPSPPSKATSRDVLSKLHSHLSNWKSILLSQAG 1129
            R+ +R ++  L F + +    YLG  +    P K     ++SK+ S +S W   +LS AG
Sbjct: 249  RSRRRMLVNKLDFHQQV-QGTYLGIPLLFRKPVKNDFTSIISKIRSQISLWGIRMLSLAG 307

Query: 1128 QATLINSTILSTSIHALTPSWIPRTHTDNFNKVSCQFLWANLYPKKGLHLISWNLVISPK 949
            + TLINS + S  ++ ++ + +PR+      K+  QFLW       GLH ++W  +  PK
Sbjct: 308  RVTLINSVLSSIPLYVISHTHVPRSVLCCIEKLIRQFLWNGNLNHHGLHYVNWESITKPK 367

Query: 948  DSDGLIIKDFSYLYVASNAKGCPQP*E*HLG*PGQC*IWFY*PLVSFRIQFHVLEL*GLD 769
             S GL I  FS                           W    +V F +QF+        
Sbjct: 368  CSGGLGIHRFS--------------------------TWSQVLMVKFAVQFYT------- 394

Query: 768  *RHEGSQEWFLQXXXXXXXXXXNIL---NHAWCL-----DLSLS---------------H 658
             +H+     + Q          +     ++ W +     DL L                H
Sbjct: 395  -KHQSLWVSYFQAKYGNRDPIFSCNRGDSYVWKMICHSGDLVLQNMKRKIGSGVSCSVLH 453

Query: 657  KPSFFNV------SYANRSL----LVSNFLQEGSW-RVQHIQAFSGPELSKIILGTPLPN 511
             P   N+      +Y N  L     VS F Q G W   + +Q F    + +I   T LP 
Sbjct: 454  DPWISNIPIIRWPTYINSMLDSPNYVSEFFQHGVWNETKLLQHFDAALVKRI---TSLPR 510

Query: 510  LPD--DDKWIWREDLLGCSFNNSAYDYLLRERLALEDPCVGWRCLWSLAVTPRIKIFGWK 337
            L +   D W+W+               + ++          W  +W L   PR + F W+
Sbjct: 511  LQNSASDIWVWQ----STETEKIPTSKIYKDLFPASGCSTAW--VWKLKTQPRFQTFIWR 564

Query: 336  XXXXXXXXXXXLVKFRIDNAILCCFCKCDLDSIDHIFFRCVYAG*IF 196
                       LV  R+     C +   + ++ +HIF  C +A  +F
Sbjct: 565  ICLDSLPTSAWLVSRRLSATTNCPWGCDEPENSNHIFCNCPFARNVF 611


>ref|XP_016195172.1| uncharacterized protein LOC107636160 [Arachis ipaensis]
          Length = 277

 Score = 78.2 bits (191), Expect = 5e-12
 Identities = 39/109 (35%), Positives = 61/109 (55%)
 Frame = -2

Query: 1248 KYLGAFIAPSPPSKATSRDVLSKLHSHLSNWKSILLSQAGQATLINSTILSTSIHALTPS 1069
            +YLG  +  S  S+A+   V+ K+   L+NWK  LL++AG+  LINS   S  ++ +  S
Sbjct: 50   RYLGVNLNHSRTSRASFHSVIEKVRGRLANWKGRLLNKAGRLCLINSVAASIPVYHMQVS 109

Query: 1068 WIPRTHTDNFNKVSCQFLWANLYPKKGLHLISWNLVISPKDSDGLIIKD 922
            + P    D  + +  QFLW      +GL L++W  VI+PK   GL ++D
Sbjct: 110  FFPNWVCDKLSSMMRQFLWKGQVDGRGLSLVNWRTVITPKKFGGLGVRD 158