BLASTX nr result
ID: Cheilocostus21_contig00044599
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00044599
(556 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKI52678.1| hypothetical protein CRG98_026938, partial [Punic... 151 4e-58
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa... 145 3e-53
gb|OTG07182.1| putative zinc finger, CCHC-type [Helianthus annuus] 142 4e-53
dbj|BAA22288.1| polyprotein [Oryza australiensis] 142 4e-53
gb|KYP68472.1| Retrovirus-related Pol polyprotein from transposo... 145 4e-53
gb|KYP31134.1| Retrovirus-related Pol polyprotein from transposo... 144 1e-52
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e... 137 4e-52
gb|PPZ39290.1| hypothetical protein C5P26_25665, partial [Escher... 140 1e-51
gb|PNX87842.1| retrotransposon protein putative Ty1-copia subcla... 137 3e-51
gb|PPZ05609.1| hypothetical protein C5P41_24865, partial [Escher... 139 4e-51
gb|PPY93112.1| hypothetical protein C5P31_25365, partial [Escher... 138 6e-51
gb|PKI73953.1| hypothetical protein CRG98_005646 [Punica granatum] 145 9e-51
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D... 140 1e-50
gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Ja... 136 2e-50
gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subc... 136 2e-50
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc... 136 3e-50
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group] 136 3e-50
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc... 137 5e-50
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group] 137 5e-50
gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subc... 134 6e-50
>gb|PKI52678.1| hypothetical protein CRG98_026938, partial [Punica granatum]
Length = 331
Score = 151 bits (382), Expect(2) = 4e-58
Identities = 72/106 (67%), Positives = 86/106 (81%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFLNG L EDVYM Q E F+ A KVCKL+R IYGL QAS+S+N RFD+A K++ F
Sbjct: 185 KTAFLNGNLLEDVYMTQPEGFVDPHSAEKVCKLQRSIYGLKQASRSWNFRFDDAIKEFGF 244
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWLG 3
KNED+ CVYKK+SGS++IFL+LYVD+ILLIGNDIP+L VK WLG
Sbjct: 245 NKNEDEPCVYKKVSGSIVIFLVLYVDDILLIGNDIPSLQSVKTWLG 290
Score = 101 bits (251), Expect(2) = 4e-58
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = -2
Query: 489 EGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDYEIWQIDVKNCF 310
+GN++T+K RLVAKGF+QVHGVDYDETFS VAM KSI ILLAIAAY+DYEIWQ+DVK F
Sbjct: 129 DGNVITFKRRLVAKGFRQVHGVDYDETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAF 188
>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
19.29) [Arabidopsis thaliana]
emb|CAB80804.1| putative retrotransposon protein [Arabidopsis thaliana]
Length = 964
Score = 145 bits (367), Expect(2) = 3e-53
Identities = 70/106 (66%), Positives = 84/106 (79%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFLNG LEE VYM Q E F + A KVCKL R IYGL QAS+S+N+RF+EA K++DF
Sbjct: 555 KTAFLNGNLEEHVYMTQPEGFTVPEAARKVCKLHRSIYGLKQASRSWNLRFNEAIKEFDF 614
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWLG 3
I+NE++ CVYKK SGS + FL+LYVD+ILL+GNDIP L VK WLG
Sbjct: 615 IRNEEEPCVYKKTSGSAVAFLVLYVDDILLLGNDIPLLQSVKTWLG 660
Score = 90.9 bits (224), Expect(2) = 3e-53
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = -2
Query: 489 EGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDYEIWQIDVKNCF 310
+GNI YK LVAKG+KQVHG+DYDET+S VAM KSI ILLA AA++DYEIWQ+DVK F
Sbjct: 499 DGNIQIYKAGLVAKGYKQVHGIDYDETYSPVAMLKSIRILLATAAHYDYEIWQMDVKTAF 558
>gb|OTG07182.1| putative zinc finger, CCHC-type [Helianthus annuus]
Length = 1325
Score = 142 bits (357), Expect(2) = 4e-53
Identities = 66/106 (62%), Positives = 84/106 (79%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFLNG+L EDVYM Q + FI K ++VCKL + IYGL QAS+S+N+RFD+ K++ F
Sbjct: 913 KTAFLNGHLSEDVYMVQPDGFIDPKYPNRVCKLNKSIYGLKQASRSWNLRFDQKVKEFGF 972
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWLG 3
+KNED+ CVY+K SGS I FLILYVD+IL+IGN+IP L +K WLG
Sbjct: 973 VKNEDEPCVYRKASGSAISFLILYVDDILIIGNNIPMLKEIKHWLG 1018
Score = 94.4 bits (233), Expect(2) = 4e-53
Identities = 46/59 (77%), Positives = 49/59 (83%)
Frame = -2
Query: 486 GNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDYEIWQIDVKNCF 310
GNI TYK RLVAKGF Q G+DYDETFS VAM KSI ILLAIAAY+DYEIWQ+DVK F
Sbjct: 858 GNIQTYKARLVAKGFTQTQGIDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAF 916
>dbj|BAA22288.1| polyprotein [Oryza australiensis]
Length = 1317
Score = 142 bits (358), Expect(2) = 4e-53
Identities = 69/105 (65%), Positives = 84/105 (80%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFLNG L EDVYM Q + F+ + K+CKL++ IYGL QAS+S+NIRFDE K + F
Sbjct: 908 KTAFLNGNLSEDVYMIQPQGFVDPESPGKICKLQKSIYGLKQASRSWNIRFDEVIKGFGF 967
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWL 6
IKNE++ACVYKK+SGS I+FLILYVD+ILLIGNDIP L VK+ L
Sbjct: 968 IKNEEEACVYKKVSGSAIVFLILYVDDILLIGNDIPMLESVKSSL 1012
Score = 94.0 bits (232), Expect(2) = 4e-53
Identities = 45/60 (75%), Positives = 50/60 (83%)
Frame = -2
Query: 489 EGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDYEIWQIDVKNCF 310
+GN+ YK RLVAKGFKQ+ GVDYDETFS VAM KSI I+LAIAAY DYEIWQ+DVK F
Sbjct: 852 DGNVHIYKARLVAKGFKQIQGVDYDETFSPVAMLKSIRIILAIAAYFDYEIWQMDVKTAF 911
>gb|KYP68472.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 676
Score = 145 bits (365), Expect(2) = 4e-53
Identities = 68/105 (64%), Positives = 86/105 (81%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KT FLNG L+EDVYM Q E FI S D HKVCKL+R IYGL QAS+S+NI+F++ K++DF
Sbjct: 454 KTTFLNGELKEDVYMTQPEGFITSSDHHKVCKLERSIYGLKQASRSWNIQFNKTIKNFDF 513
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWL 6
++ E++ CVYK++SGS IIFL+LYVD+ILLIGNDIP+L K WL
Sbjct: 514 VRCEEEPCVYKRVSGSTIIFLMLYVDDILLIGNDIPSLQSTKIWL 558
Score = 91.3 bits (225), Expect(2) = 4e-53
Identities = 43/71 (60%), Positives = 55/71 (77%)
Frame = -2
Query: 522 CIY*HNEGMAWEGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDY 343
C + + + + +G + TYK RLVAKG++Q G+DYDETFS +AM KSI ILLAIAAY+DY
Sbjct: 387 CKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDETFSPMAMLKSIRILLAIAAYYDY 446
Query: 342 EIWQIDVKNCF 310
EIWQ+DVK F
Sbjct: 447 EIWQMDVKTTF 457
>gb|KYP31134.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 830
Score = 144 bits (364), Expect(2) = 1e-52
Identities = 68/105 (64%), Positives = 87/105 (82%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFLNG L+EDVYM Q E FI S + HKVCKL+R IYGL QAS+S+NI+F++ K++DF
Sbjct: 722 KTAFLNGELKEDVYMTQPEGFITSSNHHKVCKLERSIYGLKQASRSWNIQFNKTIKNFDF 781
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWL 6
++ E++ CVYK++SGS IIFL+LYVD+ILLIGNDIP+L K WL
Sbjct: 782 VRCEEEPCVYKRVSGSTIIFLMLYVDDILLIGNDIPSLQSTKIWL 826
Score = 90.1 bits (222), Expect(2) = 1e-52
Identities = 42/71 (59%), Positives = 55/71 (77%)
Frame = -2
Query: 522 CIY*HNEGMAWEGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDY 343
C + + + + +G + TYK RLVAKG++Q G+DYDETFS +AM KSI ILLAIAAY+DY
Sbjct: 655 CKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDETFSPMAMLKSIRILLAIAAYYDY 714
Query: 342 EIWQIDVKNCF 310
EIW++DVK F
Sbjct: 715 EIWKMDVKTAF 725
>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 137 bits (346), Expect(2) = 4e-52
Identities = 67/105 (63%), Positives = 82/105 (78%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFLNG L EDVYM Q E F+ +A KVCKL++ IYGL QAS+S+NIRFDE K + F
Sbjct: 904 KTAFLNGKLSEDVYMTQPEGFVDPNNASKVCKLQKSIYGLKQASRSWNIRFDEEIKRFGF 963
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWL 6
+KN+++ CVY K+SGS ++ LILYVD+ILLIGNDIP L VKA L
Sbjct: 964 VKNKEEPCVYMKVSGSTLVILILYVDDILLIGNDIPMLESVKASL 1008
Score = 95.1 bits (235), Expect(2) = 4e-52
Identities = 46/71 (64%), Positives = 56/71 (78%)
Frame = -2
Query: 522 CIY*HNEGMAWEGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDY 343
C + + + + +GN+ +K RLVAKGF+QV GVDYDETFSLVAM KSI I+LAIAAY DY
Sbjct: 837 CKWIYKKKIDMDGNVHIHKARLVAKGFRQVQGVDYDETFSLVAMLKSIRIILAIAAYFDY 896
Query: 342 EIWQIDVKNCF 310
EIWQ+DVK F
Sbjct: 897 EIWQMDVKTAF 907
>gb|PPZ39290.1| hypothetical protein C5P26_25665, partial [Escherichia coli]
Length = 284
Score = 140 bits (352), Expect(2) = 1e-51
Identities = 68/105 (64%), Positives = 82/105 (78%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFLNGY+EE+++M Q F S+D KVCKLKR IYGL QAS+S+NIRFDEA K + F
Sbjct: 173 KTAFLNGYIEENIFMEQPRGF-ESQDGSKVCKLKRSIYGLKQASRSWNIRFDEAIKSFGF 231
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWL 6
IKNED+ CVYKK+S S I FL+LYVD+ILL+GND L +K WL
Sbjct: 232 IKNEDEPCVYKKVSDSAITFLVLYVDDILLMGNDTGMLTTIKVWL 276
Score = 90.9 bits (224), Expect(2) = 1e-51
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = -2
Query: 489 EGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDYEIWQIDVKNCF 310
+G + TYK RLVAKGF+Q G+DY+ETFS VAM KSI ILLAIAAY+DYEIWQ+DVK F
Sbjct: 117 DGKVETYKARLVAKGFRQRQGIDYEETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAF 176
>gb|PNX87842.1| retrotransposon protein putative Ty1-copia subclass, partial
[Trifolium pratense]
Length = 511
Score = 137 bits (344), Expect(2) = 3e-51
Identities = 65/105 (61%), Positives = 82/105 (78%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFLNG L+E+VYM Q E F D +KVCKL+R IYGL QAS+S+NIRF+ + ++F
Sbjct: 206 KTAFLNGELKEEVYMTQPEGFTSLSDHNKVCKLQRSIYGLKQASRSWNIRFNNTIEKFNF 265
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWL 6
+K E++ CVYKKISGS IIFL+LYVD+ILL GNDIP++ K WL
Sbjct: 266 VKCEEEPCVYKKISGSSIIFLVLYVDDILLFGNDIPSMQSTKVWL 310
Score = 92.8 bits (229), Expect(2) = 3e-51
Identities = 44/71 (61%), Positives = 55/71 (77%)
Frame = -2
Query: 522 CIY*HNEGMAWEGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDY 343
C + + + + +G + TYK RLVAKG++Q G+DYDETFS VAM KSI ILLAIAAY+DY
Sbjct: 139 CKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDETFSPVAMIKSIRILLAIAAYYDY 198
Query: 342 EIWQIDVKNCF 310
EIWQ+DVK F
Sbjct: 199 EIWQMDVKTAF 209
>gb|PPZ05609.1| hypothetical protein C5P41_24865, partial [Escherichia coli]
Length = 859
Score = 139 bits (349), Expect(2) = 4e-51
Identities = 67/105 (63%), Positives = 82/105 (78%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KT FLNGY+EE+++M Q + F S+D KVCKLKR IYGL QAS+S+NIRFDEA K + F
Sbjct: 510 KTTFLNGYIEENIFMEQPKGF-ESQDGSKVCKLKRSIYGLKQASRSWNIRFDEAIKSFGF 568
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWL 6
IKNED+ CVYKK+S S I FL+LYVD+ILL+GND L +K WL
Sbjct: 569 IKNEDEPCVYKKVSDSAITFLVLYVDDILLMGNDTGMLTTIKVWL 613
Score = 90.5 bits (223), Expect(2) = 4e-51
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = -2
Query: 489 EGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDYEIWQIDVKNCF 310
+G + TYK RLVAKGF+Q G+DY+ETFS VAM KSI ILLAIAAY+DYEIWQ+DVK F
Sbjct: 454 DGKVETYKARLVAKGFRQRQGIDYEETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTTF 513
>gb|PPY93112.1| hypothetical protein C5P31_25365, partial [Escherichia coli]
Length = 813
Score = 138 bits (347), Expect(2) = 6e-51
Identities = 67/105 (63%), Positives = 82/105 (78%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFLNGY+EE+++M Q + F S+D KVCKLKR IYGL QA +S+NIRFDEA K + F
Sbjct: 419 KTAFLNGYIEENIFMEQPKGF-ESQDGSKVCKLKRSIYGLKQALRSWNIRFDEAIKSFGF 477
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWL 6
IKNED+ CVYKK+S S I FL+LYVD+ILL+GND L +K WL
Sbjct: 478 IKNEDEPCVYKKVSDSAITFLVLYVDDILLMGNDTGMLTTIKVWL 522
Score = 90.9 bits (224), Expect(2) = 6e-51
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = -2
Query: 489 EGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDYEIWQIDVKNCF 310
+G + TYK RLVAKGF+Q G+DY+ETFS VAM KSI ILLAIAAY+DYEIWQ+DVK F
Sbjct: 363 DGKVETYKARLVAKGFRQRQGIDYEETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAF 422
>gb|PKI73953.1| hypothetical protein CRG98_005646 [Punica granatum]
Length = 291
Score = 145 bits (366), Expect(2) = 9e-51
Identities = 73/105 (69%), Positives = 83/105 (79%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFLNGY+EED++M Q + F SKD KVCKLKR IYGL Q S+S+N RFDEA K + F
Sbjct: 95 KTAFLNGYIEEDIFMDQPKGF-ESKDKSKVCKLKRSIYGLKQVSRSWNRRFDEAVKSFGF 153
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWL 6
IKNED+ CVYKK SGSMI FL+LYVD+ILLIGNDI L VK WL
Sbjct: 154 IKNEDEPCVYKKASGSMIAFLVLYVDDILLIGNDIGMLTSVKVWL 198
Score = 82.8 bits (203), Expect(2) = 9e-51
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = -2
Query: 489 EGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDYEIWQIDVKNCF 310
+G + TYK RLVAKG++Q GVDY+ETF V+M KSI I+LAIAA++DYE+WQ+DVK F
Sbjct: 39 DGKVETYKARLVAKGYRQKLGVDYEETFLPVSMLKSIRIMLAIAAHYDYEVWQMDVKTAF 98
>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
Length = 1303
Score = 140 bits (352), Expect(2) = 1e-50
Identities = 67/106 (63%), Positives = 85/106 (80%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFLNG L EDVYM Q E F+ +K +KVCKL+R IYGL QAS+S+N+ F E K++ F
Sbjct: 891 KTAFLNGKLTEDVYMNQPEGFVDAKYPNKVCKLERSIYGLKQASRSWNLCFHEKVKEFGF 950
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWLG 3
++ED++CVY K SGS++ FL+LYVD+ILL+GNDIPTL VKAWLG
Sbjct: 951 SRSEDESCVYVKASGSIVTFLVLYVDDILLMGNDIPTLQDVKAWLG 996
Score = 87.8 bits (216), Expect(2) = 1e-50
Identities = 42/60 (70%), Positives = 48/60 (80%)
Frame = -2
Query: 489 EGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDYEIWQIDVKNCF 310
+G + T+K RLVAKGF Q GVDYDETFS VA KSI I+LAIAA+HDYEIWQ+DVK F
Sbjct: 835 DGKVHTFKARLVAKGFTQTPGVDYDETFSPVAKIKSIRIMLAIAAFHDYEIWQMDVKTAF 894
>gb|AAM74249.1|AC074355_11 Putative retroelement [Oryza sativa Japonica Group]
Length = 700
Score = 136 bits (343), Expect(2) = 2e-50
Identities = 66/105 (62%), Positives = 83/105 (79%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFL+G L+EDVYM Q + F+ + A K+CKL++ IYGL QAS+S+NIRFDE K F
Sbjct: 462 KTAFLSGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVIKALGF 521
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWL 6
+KNE++ CVYKKI+GS ++FLILYVD+ILLIGNDIP L VK L
Sbjct: 522 VKNEEEPCVYKKINGSALMFLILYVDDILLIGNDIPMLESVKTSL 566
Score = 90.5 bits (223), Expect(2) = 2e-50
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = -2
Query: 489 EGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDYEIWQIDVKNCF 310
+GN+ YK RLVAKGF+Q+ GV+YDETFS VAM KSI I+LAIAAY DYEIWQ+DVK F
Sbjct: 406 DGNVHIYKARLVAKGFRQIQGVNYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAF 465
>gb|AAP52343.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 655
Score = 136 bits (343), Expect(2) = 2e-50
Identities = 66/105 (62%), Positives = 83/105 (79%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFL+G L+EDVYM Q + F+ + A K+CKL++ IYGL QAS+S+NIRFDE K F
Sbjct: 417 KTAFLSGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVIKALGF 476
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWL 6
+KNE++ CVYKKI+GS ++FLILYVD+ILLIGNDIP L VK L
Sbjct: 477 VKNEEEPCVYKKINGSALMFLILYVDDILLIGNDIPMLESVKTSL 521
Score = 90.5 bits (223), Expect(2) = 2e-50
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = -2
Query: 489 EGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDYEIWQIDVKNCF 310
+GN+ YK RLVAKGF+Q+ GV+YDETFS VAM KSI I+LAIAAY DYEIWQ+DVK F
Sbjct: 361 DGNVHIYKARLVAKGFRQIQGVNYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAF 420
>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1142
Score = 136 bits (343), Expect(2) = 3e-50
Identities = 66/101 (65%), Positives = 80/101 (79%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFLNG L+EDVYM Q + F+ + A K+CKL++ IYGL QAS+S+NIRFDE K F
Sbjct: 831 KTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKALGF 890
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVV 18
+KNE+ CVYKKISGS ++FLILYVD+ILLIGNDIP L V
Sbjct: 891 VKNEEVPCVYKKISGSALVFLILYVDDILLIGNDIPMLESV 931
Score = 90.1 bits (222), Expect(2) = 3e-50
Identities = 43/60 (71%), Positives = 49/60 (81%)
Frame = -2
Query: 489 EGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDYEIWQIDVKNCF 310
+GN+ YK RLVAKGF+Q+ GVDYDETF VAM KSI I+LAIAAY DYEIWQ+DVK F
Sbjct: 775 DGNVHIYKARLVAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAF 834
>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1084
Score = 136 bits (343), Expect(2) = 3e-50
Identities = 66/101 (65%), Positives = 80/101 (79%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFLNG L+EDVYM Q + F+ + A K+CKL++ IYGL QAS+S+NIRFDE K F
Sbjct: 773 KTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYGLKQASRSWNIRFDEVVKALGF 832
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVV 18
+KNE+ CVYKKISGS ++FLILYVD+ILLIGNDIP L V
Sbjct: 833 VKNEEVPCVYKKISGSALVFLILYVDDILLIGNDIPMLESV 873
Score = 90.1 bits (222), Expect(2) = 3e-50
Identities = 43/60 (71%), Positives = 49/60 (81%)
Frame = -2
Query: 489 EGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDYEIWQIDVKNCF 310
+GN+ YK RLVAKGF+Q+ GVDYDETF VAM KSI I+LAIAAY DYEIWQ+DVK F
Sbjct: 717 DGNVHIYKARLVAKGFRQIQGVDYDETFLPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAF 776
>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1248
Score = 137 bits (346), Expect(2) = 5e-50
Identities = 67/105 (63%), Positives = 82/105 (78%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFLNG L+EDVYM Q + F+ + A K+CKL++ IY L QAS+S+NIRFDE K F
Sbjct: 857 KTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYRLKQASRSWNIRFDEVVKALGF 916
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWL 6
+KNE++ CVYKKISGS ++FLILYVD+ILLIGNDIP L VK L
Sbjct: 917 VKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVKTSL 961
Score = 88.2 bits (217), Expect(2) = 5e-50
Identities = 42/60 (70%), Positives = 48/60 (80%)
Frame = -2
Query: 489 EGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDYEIWQIDVKNCF 310
+G + Y RLVAKGF+Q+ GVDYDETFS VAM KSI I+LAIAAY DYEIWQ+DVK F
Sbjct: 801 DGTVHIYNARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAF 860
>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1161
Score = 137 bits (346), Expect(2) = 5e-50
Identities = 67/105 (63%), Positives = 82/105 (78%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFLNG L+EDVYM Q + F+ + A K+CKL++ IY L QAS+S+NIRFDE K F
Sbjct: 770 KTAFLNGNLDEDVYMTQPKGFVDPQSAKKICKLQKSIYRLKQASRSWNIRFDEVVKALGF 829
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWL 6
+KNE++ CVYKKISGS ++FLILYVD+ILLIGNDIP L VK L
Sbjct: 830 VKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVKTSL 874
Score = 88.2 bits (217), Expect(2) = 5e-50
Identities = 42/60 (70%), Positives = 48/60 (80%)
Frame = -2
Query: 489 EGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDYEIWQIDVKNCF 310
+G + Y RLVAKGF+Q+ GVDYDETFS VAM KSI I+LAIAAY DYEIWQ+DVK F
Sbjct: 714 DGTVHIYNARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAF 773
>gb|ABF97393.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1073
Score = 134 bits (338), Expect(2) = 6e-50
Identities = 66/105 (62%), Positives = 81/105 (77%)
Frame = -3
Query: 320 KTAFLNGYLEEDVYMAQLESFIHSKDAHKVCKLKRFIYGLNQASQSYNIRFDEAAKDYDF 141
KTAFLNG +EDVYM Q + F+ + A +CKL++ IYGL QAS+S+NIRFDE K F
Sbjct: 838 KTAFLNGNHDEDVYMTQPKGFVDLQSAKMICKLQKSIYGLKQASRSWNIRFDELVKALGF 897
Query: 140 IKNEDDACVYKKISGSMIIFLILYVDNILLIGNDIPTLHVVKAWL 6
+KNE++ CVYKKISGS ++FLILYVD+ILLIGNDIP L VK L
Sbjct: 898 LKNEEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVKTSL 942
Score = 90.9 bits (224), Expect(2) = 6e-50
Identities = 43/60 (71%), Positives = 50/60 (83%)
Frame = -2
Query: 489 EGNIVTYKDRLVAKGFKQVHGVDYDETFSLVAMFKSILILLAIAAYHDYEIWQIDVKNCF 310
+GN+ YK RLVAKGF+Q+ GVDYDETFS VAM KSI I+LAIAAY DYEIWQ++VK F
Sbjct: 782 DGNVHIYKARLVAKGFRQIQGVDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMEVKTAF 841