BLASTX nr result

ID: Cheilocostus21_contig00044452 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00044452
         (1216 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009402489.1| PREDICTED: protein CHUP1, chloroplastic isof...    58   5e-25
ref|XP_018681763.1| PREDICTED: protein CHUP1, chloroplastic isof...    54   5e-24
ref|XP_008805063.1| PREDICTED: protein CHUP1, chloroplastic [Pho...    47   1e-05

>ref|XP_009402489.1| PREDICTED: protein CHUP1, chloroplastic isoform X1 [Musa acuminata
           subsp. malaccensis]
          Length = 626

 Score = 57.8 bits (138), Expect(4) = 5e-25
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = +2

Query: 86  RAMKQELPLADHNASSPLPSAARGRVPRLKETPRADSAN 202
           RAMKQ+LP AD+  SSP+  AAR R PR+KETPR DSAN
Sbjct: 91  RAMKQDLPAADNKTSSPVLPAARARTPRMKETPRVDSAN 129



 Score = 47.8 bits (112), Expect(4) = 5e-25
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 21/177 (11%)
 Frame = +3

Query: 348 NREDAKVVE*YGWLQIA-------------EDGRNTEVEVLKGRLDRSAILVE------- 467
           NRE+AKVV  +   Q A             EDG +T++  L+ RLD S  L+        
Sbjct: 175 NREEAKVVGSHDVEQYARLRRRADTSCRGSEDGASTKMRELQTRLDESERLLRDSQSEVL 234

Query: 468 -LQNGVSALDLTHLR*RSYDPKC*IRVGEAEGRARPRCRRSKDHNPGED*SGGIRQKSGF 644
            L+  +  L + ++   S   K    + E+   A  + +  + H+  E        KSGF
Sbjct: 235 ALRAQIEKLQVLNVELESQKKK----LEESLSAAEAKIKVLEKHDQVESVI-----KSGF 285

Query: 645 SDVLELAQKMSDNTSEMEVIGDVI*KK*SLLMKPSNEVMDVQSKVVIKVAVPALITS 815
           S+V+E+ QK S N  +              ++KP  + + VQSK ++K  VP L TS
Sbjct: 286 SNVMEVVQKKSQNVKDKIQFS---------VLKPPTKAVGVQSKALVKKPVPPLPTS 333



 Score = 40.8 bits (94), Expect(4) = 5e-25
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = +1

Query: 214 GLKPRPKAAPLSASTTNRARESLRFSELRPAI 309
           GLK RPK A + AS TN AR+S+ F++LRPAI
Sbjct: 134 GLKARPKPASVDASGTNVARKSILFNKLRPAI 165



 Score = 38.1 bits (87), Expect(4) = 5e-25
 Identities = 34/86 (39%), Positives = 43/86 (50%)
 Frame = +1

Query: 868  SAANKASALVQLYYSLTKRDGKQSPRVMEVLAALFLAMHTEALSGSSNIDQ*IIYDKCFD 1047
            +A +K SALV+LY+SL+KRDGKQ             +M     S  SN  +  I  +   
Sbjct: 355  NAMHKPSALVELYHSLSKRDGKQG------------SMVNGGASPLSNNARNSIVGELQS 402

Query: 1048 TSSFK**CFHAIHLLA*IKADVEQKG 1125
             SS         HLLA IK+DVE KG
Sbjct: 403  RSS---------HLLA-IKSDVETKG 418


>ref|XP_018681763.1| PREDICTED: protein CHUP1, chloroplastic isoform X2 [Musa acuminata
           subsp. malaccensis]
          Length = 534

 Score = 54.3 bits (129), Expect(4) = 5e-24
 Identities = 25/37 (67%), Positives = 29/37 (78%)
 Frame = +2

Query: 92  MKQELPLADHNASSPLPSAARGRVPRLKETPRADSAN 202
           MKQ+LP AD+  SSP+  AAR R PR+KETPR DSAN
Sbjct: 1   MKQDLPAADNKTSSPVLPAARARTPRMKETPRVDSAN 37



 Score = 47.8 bits (112), Expect(4) = 5e-24
 Identities = 50/177 (28%), Positives = 78/177 (44%), Gaps = 21/177 (11%)
 Frame = +3

Query: 348 NREDAKVVE*YGWLQIA-------------EDGRNTEVEVLKGRLDRSAILVE------- 467
           NRE+AKVV  +   Q A             EDG +T++  L+ RLD S  L+        
Sbjct: 83  NREEAKVVGSHDVEQYARLRRRADTSCRGSEDGASTKMRELQTRLDESERLLRDSQSEVL 142

Query: 468 -LQNGVSALDLTHLR*RSYDPKC*IRVGEAEGRARPRCRRSKDHNPGED*SGGIRQKSGF 644
            L+  +  L + ++   S   K    + E+   A  + +  + H+  E        KSGF
Sbjct: 143 ALRAQIEKLQVLNVELESQKKK----LEESLSAAEAKIKVLEKHDQVESVI-----KSGF 193

Query: 645 SDVLELAQKMSDNTSEMEVIGDVI*KK*SLLMKPSNEVMDVQSKVVIKVAVPALITS 815
           S+V+E+ QK S N  +              ++KP  + + VQSK ++K  VP L TS
Sbjct: 194 SNVMEVVQKKSQNVKDKIQFS---------VLKPPTKAVGVQSKALVKKPVPPLPTS 241



 Score = 40.8 bits (94), Expect(4) = 5e-24
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = +1

Query: 214 GLKPRPKAAPLSASTTNRARESLRFSELRPAI 309
           GLK RPK A + AS TN AR+S+ F++LRPAI
Sbjct: 42  GLKARPKPASVDASGTNVARKSILFNKLRPAI 73



 Score = 38.1 bits (87), Expect(4) = 5e-24
 Identities = 34/86 (39%), Positives = 43/86 (50%)
 Frame = +1

Query: 868  SAANKASALVQLYYSLTKRDGKQSPRVMEVLAALFLAMHTEALSGSSNIDQ*IIYDKCFD 1047
            +A +K SALV+LY+SL+KRDGKQ             +M     S  SN  +  I  +   
Sbjct: 263  NAMHKPSALVELYHSLSKRDGKQG------------SMVNGGASPLSNNARNSIVGELQS 310

Query: 1048 TSSFK**CFHAIHLLA*IKADVEQKG 1125
             SS         HLLA IK+DVE KG
Sbjct: 311  RSS---------HLLA-IKSDVETKG 326


>ref|XP_008805063.1| PREDICTED: protein CHUP1, chloroplastic [Phoenix dactylifera]
          Length = 565

 Score = 47.4 bits (111), Expect(2) = 1e-05
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = +2

Query: 92  MKQELPLADHNASSPLPSAARGRVPRLKETPRADSAN 202
           MKQEL  +DH ASSP P AAR R+ R +++PR DSAN
Sbjct: 1   MKQELSTSDHKASSPAP-AARARISRTRDSPRGDSAN 36



 Score = 32.0 bits (71), Expect(2) = 1e-05
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +1

Query: 214 GLKPRPKAAPLSASTTNRARESLR 285
           G K RPK  PL ASTT R R S++
Sbjct: 41  GSKTRPKVVPLEASTTQRVRRSIQ 64


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