BLASTX nr result

ID: Cheilocostus21_contig00044414 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00044414
         (452 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009401608.1| PREDICTED: protein SCARECROW 2-like [Musa ac...    70   6e-11
ref|XP_018686297.1| PREDICTED: protein SCARECROW-like isoform X4...    55   7e-06
ref|XP_009411779.1| PREDICTED: protein SCARECROW 2-like isoform ...    55   7e-06
ref|XP_009411778.1| PREDICTED: protein SCARECROW 2-like isoform ...    55   7e-06
ref|XP_009411777.1| PREDICTED: protein SCARECROW 2-like isoform ...    55   7e-06

>ref|XP_009401608.1| PREDICTED: protein SCARECROW 2-like [Musa acuminata subsp.
           malaccensis]
          Length = 802

 Score = 69.7 bits (169), Expect = 6e-11
 Identities = 40/83 (48%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
 Frame = -2

Query: 253 DKMVRKRLASELDLPKDASYXXXXXXXXXXXXXXXXXXGNPALLGDI-PGQLSALFHPPS 77
           DKMVRKRLASELDL  D+ Y                   NP  LGD+ PGQ S LF+PPS
Sbjct: 93  DKMVRKRLASELDLQSDSPYGPARLSRRTTTGASSSSSANPTFLGDVLPGQPSPLFNPPS 152

Query: 76  TVPVDVDPQQSATPGLVVPASAA 8
           T+PVDV  QQSA   +++P + +
Sbjct: 153 TLPVDVG-QQSAAASVLLPVTTS 174


>ref|XP_018686297.1| PREDICTED: protein SCARECROW-like isoform X4 [Musa acuminata subsp.
           malaccensis]
          Length = 590

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 34/79 (43%), Positives = 40/79 (50%)
 Frame = -2

Query: 247 MVRKRLASELDLPKDASYXXXXXXXXXXXXXXXXXXGNPALLGDIPGQLSALFHPPSTVP 68
           M RKRL SELDL  D+SY                  GNP   GD  GQ S L +PPST+ 
Sbjct: 1   MARKRLVSELDLQPDSSYNPGRLPRRAATGASSTSSGNPTCSGDFSGQPSVLLNPPSTLS 60

Query: 67  VDVDPQQSATPGLVVPASA 11
           VD   Q S    L++PA+A
Sbjct: 61  VDA-AQHSPAASLLLPATA 78


>ref|XP_009411779.1| PREDICTED: protein SCARECROW 2-like isoform X3 [Musa acuminata
           subsp. malaccensis]
          Length = 699

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 34/79 (43%), Positives = 40/79 (50%)
 Frame = -2

Query: 247 MVRKRLASELDLPKDASYXXXXXXXXXXXXXXXXXXGNPALLGDIPGQLSALFHPPSTVP 68
           M RKRL SELDL  D+SY                  GNP   GD  GQ S L +PPST+ 
Sbjct: 1   MARKRLVSELDLQPDSSYNPGRLPRRAATGASSTSSGNPTCSGDFSGQPSVLLNPPSTLS 60

Query: 67  VDVDPQQSATPGLVVPASA 11
           VD   Q S    L++PA+A
Sbjct: 61  VDA-AQHSPAASLLLPATA 78


>ref|XP_009411778.1| PREDICTED: protein SCARECROW 2-like isoform X2 [Musa acuminata
           subsp. malaccensis]
          Length = 710

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 34/79 (43%), Positives = 40/79 (50%)
 Frame = -2

Query: 247 MVRKRLASELDLPKDASYXXXXXXXXXXXXXXXXXXGNPALLGDIPGQLSALFHPPSTVP 68
           M RKRL SELDL  D+SY                  GNP   GD  GQ S L +PPST+ 
Sbjct: 1   MARKRLVSELDLQPDSSYNPGRLPRRAATGASSTSSGNPTCSGDFSGQPSVLLNPPSTLS 60

Query: 67  VDVDPQQSATPGLVVPASA 11
           VD   Q S    L++PA+A
Sbjct: 61  VDA-AQHSPAASLLLPATA 78


>ref|XP_009411777.1| PREDICTED: protein SCARECROW 2-like isoform X1 [Musa acuminata
           subsp. malaccensis]
          Length = 712

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 34/79 (43%), Positives = 40/79 (50%)
 Frame = -2

Query: 247 MVRKRLASELDLPKDASYXXXXXXXXXXXXXXXXXXGNPALLGDIPGQLSALFHPPSTVP 68
           M RKRL SELDL  D+SY                  GNP   GD  GQ S L +PPST+ 
Sbjct: 1   MARKRLVSELDLQPDSSYNPGRLPRRAATGASSTSSGNPTCSGDFSGQPSVLLNPPSTLS 60

Query: 67  VDVDPQQSATPGLVVPASA 11
           VD   Q S    L++PA+A
Sbjct: 61  VDA-AQHSPAASLLLPATA 78


Top