BLASTX nr result

ID: Cheilocostus21_contig00044113 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00044113
         (538 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009417330.1| PREDICTED: uncharacterized CRM domain-contai...    58   1e-06

>ref|XP_009417330.1| PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
           chloroplastic isoform X1 [Musa acuminata subsp.
           malaccensis]
          Length = 368

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
 Frame = -3

Query: 272 VRLPNPRRARNSLFSFIGHYPVDCVMQKPRCMCVSHSSL------RAYSNLIVKVTASSP 111
           + L NP R  + + S  G+Y ++      RC C+S  S+      R Y ++       S 
Sbjct: 28  IPLSNPTRT-SLVGSRNGYYLMNWTSHMHRCTCISRLSMCTCSGPRGYKDM-----PFSS 81

Query: 110 QWSVSSLVHHKTHPYSPCSLQRWQSIRFRSNALVTL 3
              VSSL++HK   Y+P + QRWQSIRFRSNALVTL
Sbjct: 82  CVLVSSLIYHKPIIYNPFNPQRWQSIRFRSNALVTL 117


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