BLASTX nr result

ID: Cheilocostus21_contig00043705 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00043705
         (416 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009415474.1| PREDICTED: protein transport protein SEC16B ...    59   2e-07
ref|XP_009415458.1| PREDICTED: protein transport protein SEC16B ...    59   2e-07
ref|XP_009385851.1| PREDICTED: protein transport protein SEC16A ...    59   3e-07

>ref|XP_009415474.1| PREDICTED: protein transport protein SEC16B homolog isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 1415

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 27/53 (50%), Positives = 35/53 (66%)
 Frame = +2

Query: 2   QNEILPLVGTSEGNYSAYDEVVRSEQSTNGVLGSQDFGMSWNPTTGNYSQQNM 160
           QNE++   G SEGNY+  DE  + EQS + VLGSQ+FG  WN  T +Y Q N+
Sbjct: 356 QNEVVASAGVSEGNYNVSDEFGQPEQSADSVLGSQEFGDGWNNPTSSYVQPNV 408


>ref|XP_009415458.1| PREDICTED: protein transport protein SEC16B homolog isoform X1
           [Musa acuminata subsp. malaccensis]
 ref|XP_009415466.1| PREDICTED: protein transport protein SEC16B homolog isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 1421

 Score = 59.3 bits (142), Expect = 2e-07
 Identities = 27/53 (50%), Positives = 35/53 (66%)
 Frame = +2

Query: 2   QNEILPLVGTSEGNYSAYDEVVRSEQSTNGVLGSQDFGMSWNPTTGNYSQQNM 160
           QNE++   G SEGNY+  DE  + EQS + VLGSQ+FG  WN  T +Y Q N+
Sbjct: 356 QNEVVASAGVSEGNYNVSDEFGQPEQSADSVLGSQEFGDGWNNPTSSYVQPNV 408


>ref|XP_009385851.1| PREDICTED: protein transport protein SEC16A homolog [Musa acuminata
           subsp. malaccensis]
 ref|XP_009385853.1| PREDICTED: protein transport protein SEC16A homolog [Musa acuminata
           subsp. malaccensis]
 ref|XP_009385854.1| PREDICTED: protein transport protein SEC16A homolog [Musa acuminata
           subsp. malaccensis]
          Length = 1401

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 48/167 (28%), Positives = 66/167 (39%), Gaps = 29/167 (17%)
 Frame = +2

Query: 2   QNEILPLVGTSEGNYSAYDEVVRSEQSTNGVLGSQDFGMSWNPTTGNYSQQNMXXXXXXX 181
           QNE+  L   S+GNY   D+V +SEQST+GVL  Q  G  WN TT +Y+Q+NM       
Sbjct: 357 QNEVGALADYSKGNYHICDDVGQSEQSTDGVLAGQVSGECWNHTTNSYAQKNMLQAEQMD 416

Query: 182 XXXXXXXXXXNRHIGRTTMQT-------------------------GNNGTTIPKSPMEG 286
                     N+ IG     T                          NN T  P++ ++G
Sbjct: 417 ESRQSGVLSGNQQIGSFYSSTIPGGSYTDQNVGFRTFQPVVSHNFGSNNDTIRPQNSIQG 476

Query: 287 --VFLTNYQNMA--HXXXXXXXXXXXXXXXXXXXXQPLFQDKKASYS 415
             ++  N+Q MA                       Q L+QD  ASY+
Sbjct: 477 ESMYQMNHQKMAPNAHDNLSSSYTGNQIQNSVDYSQHLYQDTNASYT 523


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