BLASTX nr result
ID: Cheilocostus21_contig00043686
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00043686
(1078 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020096969.1| uncharacterized protein LOC109716078, partia... 120 1e-53
ref|XP_020088996.1| uncharacterized protein LOC109710675 [Ananas... 117 6e-52
gb|OMO70992.1| reverse transcriptase [Corchorus capsularis] 113 2e-45
ref|XP_010681601.1| PREDICTED: uncharacterized protein LOC104896... 108 6e-45
emb|CAB75484.1| putative protein [Arabidopsis thaliana] 112 2e-44
ref|XP_023632892.1| uncharacterized protein LOC111828651 [Capsel... 108 5e-44
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 112 1e-43
ref|XP_023634342.1| uncharacterized protein LOC17879006 [Capsell... 110 3e-43
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 112 3e-43
ref|XP_006300431.2| LOW QUALITY PROTEIN: uncharacterized protein... 110 3e-43
ref|XP_008245529.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 103 3e-43
gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indi... 103 3e-43
ref|XP_010513002.1| PREDICTED: uncharacterized protein LOC104788... 102 6e-43
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 102 1e-42
emb|CAB40051.1| putative protein [Arabidopsis thaliana] >gi|7267... 102 1e-42
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 107 1e-42
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 107 1e-42
gb|ABA97040.1| retrotransposon protein, putative, unclassified [... 102 2e-42
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 107 2e-42
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 109 2e-42
>ref|XP_020096969.1| uncharacterized protein LOC109716078, partial [Ananas comosus]
Length = 1220
Score = 120 bits (301), Expect(2) = 1e-53
Identities = 61/174 (35%), Positives = 97/174 (55%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
+D V WDS+++ + L+ P ++ I ACI S +++ IING S + G+RQGDPLS
Sbjct: 602 YDRVRWDSVTTVLSLMRFPIKWVNWIMACISSPTYAFIINGKASDWIQPAGGLRQGDPLS 661
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRIRSNFYFSHLVYANDFILAFRANPKSCHNIIS 856
PYLF+++ +L+ L+ + G + + N Y SHL+YA+D ++ + ++C I +
Sbjct: 662 PYLFILIAQVLTSLLNEAQSCGSFTGIPVGDNSYLSHLMYADDILITGAISRRNCRGIEA 721
Query: 857 CLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLGAFI 1018
L + G VN KS +Y P + VT L + +G PFKYLG+ I
Sbjct: 722 ILHKYECLSGQRVNKDKSALYLPDWLSARMKNMVTRWLNLPKGTMPFKYLGSQI 775
Score = 119 bits (298), Expect(2) = 1e-53
Identities = 53/125 (42%), Positives = 83/125 (66%)
Frame = +3
Query: 66 AINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASSTIPKSWGRTHLVFIPNR 245
A+ + GK+PGPDG EF+K++ ++ DL F + +PK WG+T++ +P +
Sbjct: 458 ALWSMPNGKAPGPDGLQAEFFKNYWDIVGLDLCKAIKHFFLHANLPKGWGQTYITLVPKK 517
Query: 246 RSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQSAFLPGQSIHDNILYV*K 425
+PS +D+ PIS CNV Y++++K+L NRLKPLL +I EQ+AF+ G+ I DNIL +
Sbjct: 518 ENPSRVADFRPISLCNVCYKIISKILVNRLKPLLPTLIGYEQAAFVAGRDISDNILAAQE 577
Query: 426 LAHSI 440
LAH++
Sbjct: 578 LAHTM 582
>ref|XP_020088996.1| uncharacterized protein LOC109710675 [Ananas comosus]
Length = 1113
Score = 117 bits (293), Expect(2) = 6e-52
Identities = 61/171 (35%), Positives = 95/171 (55%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
+D ++W +I AM +N P ++ I ACI S ++ ++NG S + CG+RQGDPLS
Sbjct: 337 YDRMAWQAILFAMHHMNFPKKWLMWIEACISSPMYALLVNGNPSNWLKPKCGLRQGDPLS 396
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRIRSNFYFSHLVYANDFILAFRANPKSCHNIIS 856
PYLF++ + +L+ ++ + G I I S SHL+YA+D ++ A + C+ I
Sbjct: 397 PYLFILTSQLLTHMLNKNLSAGKISGFCIDSRTRISHLMYADDLLIVTMAKIQECNVITE 456
Query: 857 CLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLG 1009
L+ + VNL KS VYFP + +RR+ L ++EG P YLG
Sbjct: 457 TLEFYTSITNQKVNLTKSAVYFPNWINRDLKRRIHRKLGMQEGSIPLTYLG 507
Score = 117 bits (292), Expect(2) = 6e-52
Identities = 55/133 (41%), Positives = 85/133 (63%)
Frame = +3
Query: 42 FSSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASSTIPKSWGRT 221
F+ ++ A+ + GK+PGPDG+ EFY+ + + ++ + F ++ +P W RT
Sbjct: 185 FTIDEVKAALWSMPTGKAPGPDGYPVEFYRRYWENVAPTIMRELHSFQSTGLLPTEWART 244
Query: 222 HLVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQSAFLPGQSIH 401
+V IP + +P SDY PIS CNV YRLL K++ NR+K LL +I +EQSAF+P ++I
Sbjct: 245 FIVLIPKKENPERVSDYRPISLCNVCYRLLAKIIVNRMKSLLPSLIGIEQSAFVPTRNIS 304
Query: 402 DNILYV*KLAHSI 440
DNI+ V ++ HSI
Sbjct: 305 DNIMIVQEMFHSI 317
>gb|OMO70992.1| reverse transcriptase [Corchorus capsularis]
Length = 1529
Score = 113 bits (282), Expect(2) = 2e-45
Identities = 60/172 (34%), Positives = 97/172 (56%), Gaps = 1/172 (0%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
+D V WD + S + L P ++ I C+ ++S+S I+NG + G+RQGDPLS
Sbjct: 923 YDRVEWDFLRSVLLKLGFDPLWVSWILECVSTVSYSLILNGKQAFNIFPSRGLRQGDPLS 982
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRI-RSNFYFSHLVYANDFILAFRANPKSCHNII 853
PYLF+ V ++LS ++ K+ G I +++ R + +HL +A+D + F AN +C N+I
Sbjct: 983 PYLFLFVVDVLSRSVQQKVLDGSISGIQLSRQSPMLTHLFFADDSLFFFDANLANCRNMI 1042
Query: 854 SCLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLG 1009
SC+QD+ G +N+ SR+ F R++V + L I+ P YLG
Sbjct: 1043 SCVQDYCRASGQSINMENSRLIFSSNVPEDERQQVENCLGIKVAANPGTYLG 1094
Score = 99.8 bits (247), Expect(2) = 2e-45
Identities = 51/136 (37%), Positives = 82/136 (60%)
Frame = +3
Query: 27 DLCYSFSSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASSTIPK 206
+L S+ +I A+ QLG K+PGPDGF+G FY+ ++ D+ F S + +
Sbjct: 765 ELVKEISNDEIRDAVFQLGAYKAPGPDGFSGIFYQRCWNVIKKDVCEVVRSFFRSGRMLR 824
Query: 207 SWGRTHLVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQSAFLP 386
RT +V IP + P++ S + PI+ CN Y++++KV+ NR++P L ++IS +QSAF+
Sbjct: 825 ELNRTDIVLIPKIKGPTSVSHFRPINLCNFIYKVISKVMVNRMQPFLGELISEQQSAFVA 884
Query: 387 GQSIHDNILYV*KLAH 434
+ IHDNIL + H
Sbjct: 885 QRMIHDNILIANEAFH 900
>ref|XP_010681601.1| PREDICTED: uncharacterized protein LOC104896541 [Beta vulgaris
subsp. vulgaris]
Length = 1118
Score = 108 bits (270), Expect(2) = 6e-45
Identities = 54/145 (37%), Positives = 87/145 (60%)
Frame = +3
Query: 6 IHNDKW*DLCYSFSSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFH 185
+ D+ L S + ++ L + Q+G K+PGPDG +FY+ + P + D+ + F
Sbjct: 182 LSEDQQNSLTKSVTFEEVKLVVFQMGSLKAPGPDGIPAQFYQQYWPTVGTDIWKAVSHFF 241
Query: 186 ASSTIPKSWGRTHLVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISL 365
++ I + W TH+ IP P AS + PIS CNV Y++++KVL NRLKP+L ++IS
Sbjct: 242 STGYILREWNYTHICLIPKTERPEEASQFRPISLCNVIYKIISKVLSNRLKPILKELISP 301
Query: 366 EQSAFLPGQSIHDNILYV*KLAHSI 440
Q+AF+PG+ + DN L +L ++I
Sbjct: 302 FQNAFVPGRQMVDNCLIAHELVNNI 326
Score = 102 bits (254), Expect(2) = 6e-45
Identities = 58/175 (33%), Positives = 96/175 (54%), Gaps = 1/175 (0%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
+D V WD + + + +P I C+ ++S+S I+NG ++ F CG+RQGDPLS
Sbjct: 347 YDKVDWDFLDWLLAQMRIPSKCRHWIMQCVTTVSYSIIVNGEPTSRFSPTCGLRQGDPLS 406
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRI-RSNFYFSHLVYANDFILAFRANPKSCHNII 853
YLF++V ++LS ++ + + + ++I R SHL +A+D ++ F+ANPKSC +
Sbjct: 407 SYLFILVMDVLSRMLTNGMADKSFEGLKISRLGPSVSHLFFADDSLIFFKANPKSCDGVK 466
Query: 854 SCLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLGAFI 1018
S L F G +N KS + F + +R+++ L+ KYLGA I
Sbjct: 467 SILSKFSRLSGEVINYHKSLIMFSPNTPHNSRQQMRALVNTPVADSLGKYLGANI 521
>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
Length = 851
Score = 112 bits (279), Expect(2) = 2e-44
Identities = 56/138 (40%), Positives = 86/138 (62%)
Frame = +3
Query: 27 DLCYSFSSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASSTIPK 206
+L F S+IF AI Q+G K+PGPDG T FYK ++ D+I F SS +
Sbjct: 44 ELTQDFRDSEIFEAICQIGDDKAPGPDGLTARFYKQCWDIVGNDVIKEVKLFFESSHMKT 103
Query: 207 SWGRTHLVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQSAFLP 386
S T++ IP ++P T SDY PI+ CNV Y++++K + NRLK L+ ++S Q+AF+P
Sbjct: 104 SVNHTNICMIPKIQNPQTLSDYRPIALCNVLYKVISKCMVNRLKAHLNSIVSDSQAAFIP 163
Query: 387 GQSIHDNILYV*KLAHSI 440
G+ I+DN++ ++ HS+
Sbjct: 164 GRIINDNVMIAHEIMHSL 181
Score = 97.4 bits (241), Expect(2) = 2e-44
Identities = 60/172 (34%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
+D V WD + + M L +I I A ++S+ +S +ING+ + GIRQGDPLS
Sbjct: 202 YDRVEWDFLETTMRLFGFCDKWIGWIMAAVKSVHYSVLINGSPHGYISPTRGIRQGDPLS 261
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRIRSNF-YFSHLVYANDFILAFRANPKSCHNII 853
PYLF++ +ILS LIK K G I VRI + +HL +A+D + +AN ++C +
Sbjct: 262 PYLFILCGDILSHLIKVKASSGDIRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALK 321
Query: 854 SCLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLG 1009
+ ++ G +N++KS + F + T+ R+ LL I KYLG
Sbjct: 322 DVFDVYEYYSGQKINVQKSLITFGSRVYGSTQTRLKTLLNIPNQGGGGKYLG 373
>ref|XP_023632892.1| uncharacterized protein LOC111828651 [Capsella rubella]
Length = 1748
Score = 108 bits (271), Expect(2) = 5e-44
Identities = 56/147 (38%), Positives = 85/147 (57%)
Frame = +3
Query: 27 DLCYSFSSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASSTIPK 206
DL S +I+ A+ +G ++PGPDGF+G FY F + D+I F S++
Sbjct: 805 DLTRDISEEEIYQAVFSIGTHRAPGPDGFSGVFYHQFWDDIKIDVINEVKSFFNDSSMGN 864
Query: 207 SWGRTHLVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQSAFLP 386
T++ IP P + SDY PI+ CNVSY++++KVL NRLK L VIS Q+AF+P
Sbjct: 865 LHNHTNICLIPKIECPISMSDYRPIALCNVSYKIISKVLVNRLKSHLGNVISENQAAFIP 924
Query: 387 GQSIHDNILYV*KLAHSIFIPRASPSS 467
G+ I DNI+ ++ H++ + + S
Sbjct: 925 GRMITDNIIIAHEVHHALKVRKRQSKS 951
Score = 99.0 bits (245), Expect(2) = 5e-44
Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
+D + W+ + M +L +I+ I C+ S+S+S +INGT H G+RQGDPLS
Sbjct: 963 YDRLEWNFLEKTMSVLGFDQKWIRWIMTCVSSVSYSVLINGTPHGLIHPGRGLRQGDPLS 1022
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRI-RSNFYFSHLVYANDFILAFRANPKSCHNII 853
PYLF++ ILS L+ + + +++ +HL++A+D + AN KSC+ +
Sbjct: 1023 PYLFILCAEILSQLVNNAAANRSLQGIKVSNGGVPITHLLFADDSLFFTLANDKSCNALK 1082
Query: 854 SCLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLG 1009
+ G +NL KS + F H+ +RR+ + + I KYLG
Sbjct: 1083 KIFSSYEQASGQAINLSKSSITFGSRVHHDVKRRIRNRMGIHND-GGGKYLG 1133
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 112 bits (280), Expect(2) = 1e-43
Identities = 56/138 (40%), Positives = 89/138 (64%)
Frame = +3
Query: 27 DLCYSFSSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASSTIPK 206
DL FS ++I+ AI Q+G K+PGPDG T FYK+ ++ +D+I F +S +
Sbjct: 805 DLTKEFSDTEIYDAICQIGDDKAPGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFMKP 864
Query: 207 SWGRTHLVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQSAFLP 386
S T++ IP +P+T SDY PI+ CNV Y++++K L NRLK L+ ++S Q+AF+P
Sbjct: 865 SINHTNICMIPKITNPTTLSDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIP 924
Query: 387 GQSIHDNILYV*KLAHSI 440
G+ I+DN++ ++ HS+
Sbjct: 925 GRIINDNVMIAHEVMHSL 942
Score = 94.4 bits (233), Expect(2) = 1e-43
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
+D V WD + + M L +I I A ++S+ +S +ING+ + GIRQGDPLS
Sbjct: 963 YDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLS 1022
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRIRSNF-YFSHLVYANDFILAFRANPKSCHNII 853
PYLF++ +ILS LI + G + VRI + +HL +A+D + +AN ++C +
Sbjct: 1023 PYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALK 1082
Query: 854 SCLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLG 1009
+ ++ G +N++KS + F + T+ R+ +L+I KYLG
Sbjct: 1083 DVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSRLKQILEIPNQGGGGKYLG 1134
>ref|XP_023634342.1| uncharacterized protein LOC17879006 [Capsella rubella]
Length = 1758
Score = 110 bits (275), Expect(2) = 3e-43
Identities = 52/138 (37%), Positives = 87/138 (63%)
Frame = +3
Query: 27 DLCYSFSSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASSTIPK 206
DL F++ +IF AI+ +G ++PGPDG T FYKH+ ++ D+ F A+S +
Sbjct: 812 DLTRDFTNEEIFEAISAIGDDRAPGPDGLTARFYKHYWHIIGSDVTQEIQDFFATSYMKS 871
Query: 207 SWGRTHLVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQSAFLP 386
T++ IP +PST S+Y PI+ CNV Y++++K L NRLK L+ ++S Q+AF+P
Sbjct: 872 GINHTNICMIPKINNPSTLSEYRPIALCNVLYKIISKCLVNRLKNHLNSIVSDTQAAFIP 931
Query: 387 GQSIHDNILYV*KLAHSI 440
G+ + DN++ ++ H++
Sbjct: 932 GRLVTDNVMIAHEVMHAL 949
Score = 95.1 bits (235), Expect(2) = 3e-43
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 1/172 (0%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
+D V W + M L +I I A + S+S+S +ING+ GIRQGDPLS
Sbjct: 970 YDRVEWTFLEVTMQLFGFSKKWIDWIMASVRSVSYSILINGSPHGLVIPERGIRQGDPLS 1029
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRIRSNF-YFSHLVYANDFILAFRANPKSCHNII 853
PYLF++ +I+S LIK ++ G I VRI + +HL +A+D + +AN ++C I
Sbjct: 1030 PYLFILCADIMSHLIKTRVLSGDIRGVRIGNGAPAITHLQFADDSLFFCQANARNCKAIK 1089
Query: 854 SCLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLG 1009
+ + ++ G +N KS + F H + R+ ++L+I KYLG
Sbjct: 1090 EAFEVYEYYSGQKINTSKSLITFGAKVHGQLQNRLKNILEIPNHGGGGKYLG 1141
>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 112 bits (280), Expect(2) = 3e-43
Identities = 56/138 (40%), Positives = 89/138 (64%)
Frame = +3
Query: 27 DLCYSFSSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASSTIPK 206
DL FS ++I+ AI Q+G K+PGPDG T FYK+ ++ +D+I F +S +
Sbjct: 579 DLTKEFSDTEIYDAICQIGDDKAPGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFMKP 638
Query: 207 SWGRTHLVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQSAFLP 386
S T++ IP +P+T SDY PI+ CNV Y++++K L NRLK L+ ++S Q+AF+P
Sbjct: 639 SINHTNICMIPKITNPTTLSDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIP 698
Query: 387 GQSIHDNILYV*KLAHSI 440
G+ I+DN++ ++ HS+
Sbjct: 699 GRIINDNVMIAHEVMHSL 716
Score = 93.2 bits (230), Expect(2) = 3e-43
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
+D V WD + + M L +I I A ++S+ +S +ING+ + GIRQGDPLS
Sbjct: 737 YDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLS 796
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRIRSNF-YFSHLVYANDFILAFRANPKSCHNII 853
PYLF++ +ILS LI + G + VRI + +HL +A+D + +AN ++C +
Sbjct: 797 PYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALK 856
Query: 854 SCLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLG 1009
+ ++ G +N++KS + F + T+ ++ +L+I KYLG
Sbjct: 857 DVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSKLKQILEIPNQGGGGKYLG 908
>ref|XP_006300431.2| LOW QUALITY PROTEIN: uncharacterized protein LOC17896111 [Capsella
rubella]
Length = 1764
Score = 110 bits (274), Expect(2) = 3e-43
Identities = 53/138 (38%), Positives = 86/138 (62%)
Frame = +3
Query: 27 DLCYSFSSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASSTIPK 206
+L +F++ +IF AI+ +G K+PGPDG T FYKH+ ++ D+I F +S +
Sbjct: 818 ELTKAFTNEEIFEAISSIGDDKAPGPDGLTARFYKHYWDIIGVDIIQEVQDFFETSYMKS 877
Query: 207 SWGRTHLVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQSAFLP 386
T++ IP +P T SD+ PI+ CNV Y++++K L NRLK L+ + S Q+AF+P
Sbjct: 878 GINHTNICMIPKITNPKTLSDFRPIALCNVLYKIISKCLVNRLKKHLNSIASDTQAAFIP 937
Query: 387 GQSIHDNILYV*KLAHSI 440
G+ + DNI+ ++ HS+
Sbjct: 938 GRVVTDNIMIAHEVMHSL 955
Score = 95.1 bits (235), Expect(2) = 3e-43
Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 1/172 (0%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
+D V W+ + M L +I I A + S+S+S +ING+ GIRQGDPLS
Sbjct: 976 YDRVEWNFLEVTMRLFGFSDKWISWIMASVRSVSYSILINGSPHGSVIPERGIRQGDPLS 1035
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRIRSNF-YFSHLVYANDFILAFRANPKSCHNII 853
PYLF++ +I+S LIK ++ G I +RI + +HL +A+D + +AN ++C I
Sbjct: 1036 PYLFILCADIMSHLIKSRVMDGDIRGIRIGNGVPAITHLQFADDSLFFCQANARNCQAIK 1095
Query: 854 SCLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLG 1009
+ + ++ G +N KS + F + + R+ ++LQI KYLG
Sbjct: 1096 EVFEVYEYYSGQKINTTKSLITFGSRVYGQVQNRLKNILQIPNHGGGGKYLG 1147
>ref|XP_008245529.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC103343662 [Prunus mume]
Length = 1725
Score = 103 bits (258), Expect(2) = 3e-43
Identities = 50/134 (37%), Positives = 82/134 (61%)
Frame = +3
Query: 45 SSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASSTIPKSWGRTH 224
S +I + + Q+G KSPGPDGF+G FY+ + ++ D+ F +++ ++ RT
Sbjct: 453 SDEEIRITVFQMGALKSPGPDGFSGIFYQKYWSIVGNDVCRLVKNFFSNTMSMETLNRTE 512
Query: 225 LVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQSAFLPGQSIHD 404
+ IP P + + PIS CN SY++++K+L NRL+P L ++IS +Q AF+PG+ I D
Sbjct: 513 IALIPKVPHPEWVTQFRPISLCNYSYKIISKILANRLQPFLDKIISPQQCAFIPGRQIQD 572
Query: 405 NILYV*KLAHSIFI 446
N+L + HS+ I
Sbjct: 573 NVLVAHEAFHSLKI 586
Score = 101 bits (251), Expect(2) = 3e-43
Identities = 51/172 (29%), Positives = 92/172 (53%), Gaps = 1/172 (0%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
+D + WD + + + + +++ + C+ S+ F+ I+NG + ++F G+RQGDPLS
Sbjct: 605 YDRIEWDFVQAVLLKMGFARQWVRWVLRCLSSVEFAVIVNGKVGSYFKPTRGLRQGDPLS 664
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRI-RSNFYFSHLVYANDFILAFRANPKSCHNII 853
PYLF++V+++LS +I + G I ++ R SHL +A+D ++ +A +C I+
Sbjct: 665 PYLFLIVSDVLSSMINQAVTHGFIQGMKFGRGGPVLSHLFFADDSLMFLKATENNCRVIV 724
Query: 854 SCLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLG 1009
L + G VN KS ++F + R+ +L + P KYLG
Sbjct: 725 RILDAYCTASGQLVNFEKSNMFFSPNTPLEVKDRLRAILNVTISEDPGKYLG 776
>gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indica Group]
Length = 1300
Score = 103 bits (258), Expect(2) = 3e-43
Identities = 55/137 (40%), Positives = 78/137 (56%)
Frame = +3
Query: 30 LCYSFSSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASSTIPKS 209
LC FS +I A+ Q+G K+ GPDGF FY+ P L D++ F + +P
Sbjct: 346 LCRDFSDEEISNALFQIGPLKALGPDGFPARFYQRNWPTLKVDILRAVKEFFHTGVMPDD 405
Query: 210 WGRTHLVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQSAFLPG 389
T +V IP PS D+ PIS CNV Y++++K L NR++P+L +V+S QSAF+PG
Sbjct: 406 VNETTIVLIPKVAQPSQLKDFRPISLCNVLYKVVSKCLVNRMRPILDEVVSPNQSAFVPG 465
Query: 390 QSIHDNILYV*KLAHSI 440
+ I DN L + H I
Sbjct: 466 RLITDNALLAFECFHFI 482
Score = 101 bits (251), Expect(2) = 3e-43
Identities = 61/172 (35%), Positives = 94/172 (54%), Gaps = 1/172 (0%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
+D V W + AM + ++ I +CI ++ ++ NGTL + F G+RQGDPLS
Sbjct: 503 YDRVDWRFLEQAMYKMGFAHRWVSWIMSCITTVRYAIKFNGTLLSTFAPTRGLRQGDPLS 562
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRI-RSNFYFSHLVYANDFILAFRANPKSCHNII 853
P+LF+ V + LS+L+++K+ +G I PVRI R SHL++A+D +L ++N + I
Sbjct: 563 PFLFLFVADGLSLLLEEKVNQGAISPVRICRRAPGISHLLFADDTLLFLKSNKEQAEIIN 622
Query: 854 SCLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLG 1009
S L D+ G VN K + F +A + + LQI F KYLG
Sbjct: 623 SVLGDYAASTGQLVNPSKCSIMFGEATPLSEQTDIKATLQITNNVFEDKYLG 674
>ref|XP_010513002.1| PREDICTED: uncharacterized protein LOC104788940 [Camelina sativa]
Length = 1347
Score = 102 bits (255), Expect(2) = 6e-43
Identities = 49/141 (34%), Positives = 86/141 (60%)
Frame = +3
Query: 45 SSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASSTIPKSWGRTH 224
+ +I A+ +G ++PGPDGF FY+H+ ++ +I F + + + W T+
Sbjct: 403 TDEEIRSALFSIGATRAPGPDGFNAAFYQHYWDVVGPAIISEVKNFFTTGEMQQEWNHTN 462
Query: 225 LVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQSAFLPGQSIHD 404
L IP + P T D+ PI+ CNV+Y++++K+L RLK +LS+V+S Q+AF+PG+ I D
Sbjct: 463 LCLIP-KNDPKTMKDFRPIALCNVTYKIISKILTKRLKQVLSEVVSETQAAFIPGRFITD 521
Query: 405 NILYV*KLAHSIFIPRASPSS 467
N+L ++ HS+ + + +S
Sbjct: 522 NVLIAHEVLHSLKVRQRCANS 542
Score = 101 bits (252), Expect(2) = 6e-43
Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 1/172 (0%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
+D V W + + + PT+IK I C+E++SFS +ING+ +F GIRQGDPLS
Sbjct: 554 YDRVEWRFLEAVLIKKGFHPTWIKWIMGCVETVSFSVLINGSTYGYFRPSRGIRQGDPLS 613
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRIRSNF-YFSHLVYANDFILAFRANPKSCHNII 853
P LF++ ++LS L+ G I ++I + SHL++A+D + +AN ++ N++
Sbjct: 614 PSLFILCADVLSSLLSQATREGRIQGIQISNGGPRVSHLLFADDSLFFLKANYRNSVNLL 673
Query: 854 SCLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLG 1009
+D+ G +N KS + F + TR R+ +L I KYLG
Sbjct: 674 QIFKDYGDASGQIINFEKSSITFGSRVYQQTRDRIKHILSIPNVGGGGKYLG 725
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 102 bits (255), Expect(2) = 1e-42
Identities = 52/138 (37%), Positives = 82/138 (59%)
Frame = +3
Query: 27 DLCYSFSSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASSTIPK 206
DL S +I+ AI +G K+PGPDG T FYK ++ D+I F +S + +
Sbjct: 805 DLTKDLSDLEIYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQ 864
Query: 207 SWGRTHLVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQSAFLP 386
S T++ IP +P T SDY PI+ CNV Y++++K L RLK L ++S Q+AF+P
Sbjct: 865 SINHTNICMIPKITNPETLSDYRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAFIP 924
Query: 387 GQSIHDNILYV*KLAHSI 440
G+ ++DN++ ++ HS+
Sbjct: 925 GRLVNDNVMIAHEMMHSL 942
Score = 100 bits (250), Expect(2) = 1e-42
Identities = 55/172 (31%), Positives = 96/172 (55%), Gaps = 1/172 (0%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
+D V W+ + + M L T+IK I ++S+++S ++NG GIRQGDPLS
Sbjct: 963 YDRVEWNFLETTMRLFGFSETWIKWIMGAVKSVNYSVLVNGIPHGTIQPQRGIRQGDPLS 1022
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRIRSNF-YFSHLVYANDFILAFRANPKSCHNII 853
PYLF++ +IL+ LIK+++ G I +RI + +HL +A+D + ++N ++C +
Sbjct: 1023 PYLFILCADILNHLIKNRVAEGDIRGIRIGNGVPGVTHLQFADDSLFFCQSNVRNCQALK 1082
Query: 854 SCLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLG 1009
+ ++ G +N+ KS + F H T+ R+ ++L I+ KYLG
Sbjct: 1083 DVFDVYEYYSGQKINMSKSMITFGSRVHGTTQNRLKNILGIQSHGGGGKYLG 1134
>emb|CAB40051.1| putative protein [Arabidopsis thaliana]
emb|CAB81184.1| putative protein [Arabidopsis thaliana]
Length = 1294
Score = 102 bits (255), Expect(2) = 1e-42
Identities = 52/138 (37%), Positives = 82/138 (59%)
Frame = +3
Query: 27 DLCYSFSSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASSTIPK 206
DL S +I+ AI +G K+PGPDG T FYK ++ D+I F +S + +
Sbjct: 785 DLTKDLSDLEIYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQ 844
Query: 207 SWGRTHLVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQSAFLP 386
S T++ IP +P T SDY PI+ CNV Y++++K L RLK L ++S Q+AF+P
Sbjct: 845 SINHTNICMIPKITNPETLSDYRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAFIP 904
Query: 387 GQSIHDNILYV*KLAHSI 440
G+ ++DN++ ++ HS+
Sbjct: 905 GRLVNDNVMIAHEMMHSL 922
Score = 100 bits (250), Expect(2) = 1e-42
Identities = 55/172 (31%), Positives = 96/172 (55%), Gaps = 1/172 (0%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
+D V W+ + + M L T+IK I ++S+++S ++NG GIRQGDPLS
Sbjct: 943 YDRVEWNFLETTMRLFGFSETWIKWIMGAVKSVNYSVLVNGIPHGTIQPQRGIRQGDPLS 1002
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRIRSNF-YFSHLVYANDFILAFRANPKSCHNII 853
PYLF++ +IL+ LIK+++ G I +RI + +HL +A+D + ++N ++C +
Sbjct: 1003 PYLFILCADILNHLIKNRVAEGDIRGIRIGNGVPGVTHLQFADDSLFFCQSNVRNCQALK 1062
Query: 854 SCLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLG 1009
+ ++ G +N+ KS + F H T+ R+ ++L I+ KYLG
Sbjct: 1063 DVFDVYEYYSGQKINMSKSMITFGSRVHGTTQNRLKNILGIQSHGGGGKYLG 1114
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 107 bits (268), Expect(2) = 1e-42
Identities = 60/171 (35%), Positives = 92/171 (53%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
FD+V W+ +++A+ L +P +I I CI + SF+ +NG FF S G+RQGDPLS
Sbjct: 458 FDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLS 517
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRIRSNFYFSHLVYANDFILAFRANPKSCHNIIS 856
PYLF++ + S L+ + G+I + SHL++A+D ++ F S H I
Sbjct: 518 PYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICE 577
Query: 857 CLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLG 1009
L DF + GL VN KS+++ +A + R + G FP +YLG
Sbjct: 578 TLDDFADWSGLKVNKDKSQLF--QAGLDLSERITSAAYGFPAGTFPIRYLG 626
Score = 95.5 bits (236), Expect(2) = 1e-42
Identities = 51/140 (36%), Positives = 83/140 (59%)
Frame = +3
Query: 15 DKW*DLCYSFSSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASS 194
D+ +L SF+ +I A L R K+ GPDG++ EF++ ++ +++ + F S
Sbjct: 298 DQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSG 357
Query: 195 TIPKSWGRTHLVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQS 374
+ K W T LV IP + T S++ PIS N Y++++K+L +RL+ LLS VI QS
Sbjct: 358 QLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQS 417
Query: 375 AFLPGQSIHDNILYV*KLAH 434
AFLPG+S+ +N+L ++ H
Sbjct: 418 AFLPGRSLAENVLLATEMVH 437
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 107 bits (268), Expect(2) = 1e-42
Identities = 60/171 (35%), Positives = 92/171 (53%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
FD+V W+ +++A+ L +P +I I CI + SF+ +NG FF S G+RQGDPLS
Sbjct: 458 FDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLS 517
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRIRSNFYFSHLVYANDFILAFRANPKSCHNIIS 856
PYLF++ + S L+ + G+I + SHL++A+D ++ F S H I
Sbjct: 518 PYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICE 577
Query: 857 CLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLG 1009
L DF + GL VN KS+++ +A + R + G FP +YLG
Sbjct: 578 TLDDFADWSGLKVNKDKSQLF--QAGLDLSERITSAAYGFPAGTFPIRYLG 626
Score = 95.5 bits (236), Expect(2) = 1e-42
Identities = 51/140 (36%), Positives = 83/140 (59%)
Frame = +3
Query: 15 DKW*DLCYSFSSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASS 194
D+ +L SF+ +I A L R K+ GPDG++ EF++ ++ +++ + F S
Sbjct: 298 DQCSELEKSFTDDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFFDSG 357
Query: 195 TIPKSWGRTHLVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQS 374
+ K W T LV IP + T S++ PIS N Y++++K+L +RL+ LLS VI QS
Sbjct: 358 QLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQS 417
Query: 375 AFLPGQSIHDNILYV*KLAH 434
AFLPG+S+ +N+L ++ H
Sbjct: 418 AFLPGRSLAENVLLATEMVH 437
>gb|ABA97040.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1913
Score = 102 bits (254), Expect(2) = 2e-42
Identities = 62/172 (36%), Positives = 91/172 (52%), Gaps = 1/172 (0%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
+D V W + M L P +IK I C+ S+ +S NGTL F G+RQGDPLS
Sbjct: 1156 YDRVDWVFLEQTMCKLGFAPRWIKWIMTCLSSVRYSIKFNGTLLDTFAPSRGLRQGDPLS 1215
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRI-RSNFYFSHLVYANDFILAFRANPKSCHNII 853
P+LF+ V + S L+++++ G I PV+I R SHL++ +D +L F+A+ + I
Sbjct: 1216 PFLFLFVADGFSRLMEERVAAGDITPVKICRGALGISHLLFVDDTLLFFKADCEQARLIK 1275
Query: 854 SCLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQIREGFFPFKYLG 1009
L ++ G VN K + F H T+ + +LLQI F KYLG
Sbjct: 1276 GVLNEYALGTGQLVNPNKCSILFDDTSHAETQDAIKNLLQIVCHNFEDKYLG 1327
Score = 100 bits (249), Expect(2) = 2e-42
Identities = 52/138 (37%), Positives = 79/138 (57%)
Frame = +3
Query: 27 DLCYSFSSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASSTIPK 206
DLC F+ +I A+ Q+G K+PG DGF F++ + D++ F +S +P+
Sbjct: 998 DLCKDFTEQEIADALFQIGPIKAPGLDGFPARFFQRNWDAIKKDVVSAVKSFFETSIMPE 1057
Query: 207 SWGRTHLVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQSAFLP 386
T +V IP P D+ PIS CNV Y++++K L NRL+P+L +++S QSAF+P
Sbjct: 1058 GVNDTAIVLIPKVDQPMELKDFRPISLCNVIYKIVSKCLVNRLRPILDELVSQNQSAFVP 1117
Query: 387 GQSIHDNILYV*KLAHSI 440
G+ I DN L + H I
Sbjct: 1118 GRMITDNALLAFECFHFI 1135
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 107 bits (266), Expect(2) = 2e-42
Identities = 62/174 (35%), Positives = 95/174 (54%), Gaps = 3/174 (1%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
FD+V WD I SA+ LN+P F I C+ + SFS I+NG + F S G+RQGDP+S
Sbjct: 495 FDSVRWDFIVSALRALNVPEKFTCWILECLSTASFSVILNGHSAGHFWSSKGLRQGDPMS 554
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRIRSNFYFSHLVYANDFILAFRANPKSCHNIIS 856
PYLF++ + S L++ + G+I S SHL++A+D ++ F S H I+
Sbjct: 555 PYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQLEISHLMFADDVMIFFDGKSSSLHGIVE 614
Query: 857 CLQDFYHFFGLHVNLRKSRVYFPKAHHYFTRRRVTDLLQ---IREGFFPFKYLG 1009
L+DF + GL +N K+++Y H + +D + + G P +YLG
Sbjct: 615 SLEDFAGWSGLLMNTNKTQLY-----HAGLSQSESDSMASYGFKLGSLPVRYLG 663
Score = 95.9 bits (237), Expect(2) = 2e-42
Identities = 54/142 (38%), Positives = 80/142 (56%)
Frame = +3
Query: 42 FSSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASSTIPKSWGRT 221
FSS +I A L R K+ GPDGF+ EF+ P++ ++ + F S + K W T
Sbjct: 344 FSSEQIKNAFFSLPRNKASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNAT 403
Query: 222 HLVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQSAFLPGQSIH 401
+LV IP + S+ SD+ PIS N Y++++K+L +RLK L IS QSAF+PG+
Sbjct: 404 NLVLIPKITNASSMSDFRPISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFL 463
Query: 402 DNILYV*KLAHSIFIPRASPSS 467
+N+L +L H +PSS
Sbjct: 464 ENVLLATELVHGYNKKNIAPSS 485
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 109 bits (273), Expect(2) = 2e-42
Identities = 58/141 (41%), Positives = 82/141 (58%)
Frame = +2
Query: 497 FDNVSWDSISSAMGLLNLPPTFIK*IRACIESLSFSSIINGTLSTFFHSFCGIRQGDPLS 676
FD+V WD I SA L +P F+ I CI + FS ++NG+ S FF S G+RQGDPLS
Sbjct: 599 FDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLS 658
Query: 677 PYLFMMVTNILSILIKDKICRGHIDPVRIRSNFYFSHLVYANDFILAFRANPKSCHNIIS 856
PYLF++ + S L+K + G+I ++ SHL++A+D ++ F S H I
Sbjct: 659 PYLFVLAMEVFSSLLKARFDAGYIQYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISE 718
Query: 857 CLQDFYHFFGLHVNLRKSRVY 919
L DF + GLHVN K+ +Y
Sbjct: 719 ALDDFASWSGLHVNKDKTNLY 739
Score = 92.8 bits (229), Expect(2) = 2e-42
Identities = 53/136 (38%), Positives = 78/136 (57%)
Frame = +3
Query: 27 DLCYSFSSSKIFLAINQLGRGKSPGPDGFTGEFYKHF*PLLYFDLIGFFNCFHASSTIPK 206
DL SFS I A L R K+ GPDG++ EF+K ++ ++ F S + K
Sbjct: 443 DLERSFSDLDIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLK 502
Query: 207 SWGRTHLVFIPNRRSPSTASDYHPISPCNVSYRLLTKVLPNRLKPLLSQVISLEQSAFLP 386
W T LV IP + S +D+ PIS N Y+++ K+L +RLK LL++VIS QSAFLP
Sbjct: 503 QWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLP 562
Query: 387 GQSIHDNILYV*KLAH 434
G+ + +N+L ++ H
Sbjct: 563 GRLLSENVLLATEIVH 578