BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00043621
         (746 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylat...   189   3e-51
ref|XP_009409883.1| PREDICTED: protein RNA-directed DNA methylat...   189   3e-51
ref|XP_020091607.1| protein RNA-directed DNA methylation 3 isofo...    89   2e-16
ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isofo...    89   2e-16
ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isofo...    89   2e-16
ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isofo...    89   2e-16
ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isofo...    89   2e-16
gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas co...    88   4e-16
ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylat...    87   8e-16
ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylat...    87   8e-16
ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylat...    87   8e-16
ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylat...    87   8e-16
ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylat...    85   6e-15
dbj|BAJ86774.1| predicted protein, partial [Hordeum vulgare subs...    71   2e-10
gb|EMS65052.1| hypothetical protein TRIUR3_18947 [Triticum urartu]     71   3e-10
ref|XP_021618534.1| protein RNA-directed DNA methylation 3 isofo...    69   2e-09
ref|XP_021618533.1| protein RNA-directed DNA methylation 3 isofo...    69   2e-09
ref|XP_021618532.1| protein RNA-directed DNA methylation 3 isofo...    69   2e-09
ref|XP_006654614.2| PREDICTED: protein RNA-directed DNA methylat...    66   1e-08
ref|XP_014522827.1| LOW QUALITY PROTEIN: DNA-directed RNA polyme...    64   9e-08

>ref|XP_009409884.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Musa
            acuminata subsp. malaccensis]
          Length = 1808

 Score =  189 bits (481), Expect = 3e-51
 Identities = 119/283 (42%), Positives = 155/283 (54%), Gaps = 37/283 (13%)
 Frame = +3

Query: 3    EADPWGNMA----KMKTGGSDDVVDGWGQEIGANPCNNKETCVAEDV---------WGAS 143
            EADPW NMA    K  +GGS ++ DGWG  +GA+P N        D          WG S
Sbjct: 698  EADPWSNMATATGKQTSGGSIEITDGWGLGLGADPWNKVTYANRTDAPTSDGAIGGWGNS 757

Query: 144  SSSAL---------EKAGTSGKNSDDWSEGARDVETSERDGWEKSKLSVSEAGGEWDMGN 296
            S+S L         ++AG+S   S DWS  A  V  ++ DGWEKSK SV +AGG WD  +
Sbjct: 758  SNSGLLEKASSGAGDQAGSSEIKSYDWSNKAAVVLRNDVDGWEKSKTSVDDAGGIWDNES 817

Query: 297  GLQNNACPWDSKGKEKIHHQDDAWDKAARSQEKSKDSSDVAALGWTTSDYNACSWENKGK 476
              ++NAC WDS+G  K+  ++DAWDK A+SQEKS D+ DVAA+G T S+ N CSW+NK +
Sbjct: 818  VKKSNACSWDSEGIGKMSKKEDAWDKTAKSQEKSNDNWDVAAIGQTQSNNNTCSWDNK-E 876

Query: 477  GKLSLEEDACGKFVNLQVKCSDTWDAASKGCTPSRANLNC----WDNPKTSSVSQSDDWF 644
            GK+S E+DA  K   LQ   +++ DA + G + S  N  C    WDN K+ S S S    
Sbjct: 877  GKISTEDDAWQKAAKLQDTNNNSCDAVAIGGSHSIQNHGCEVGDWDNAKSPSASLSGYRV 936

Query: 645  KADERTEAKIGGSCGAILSSQG-----------VGSATENWNK 740
            KA E  +A IG    A +S Q             G+   NWNK
Sbjct: 937  KAKENDKAVIGRLSRAGVSGQSQNCLGDNRMSPKGNYDFNWNK 979


>ref|XP_009409883.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Musa
            acuminata subsp. malaccensis]
          Length = 1809

 Score =  189 bits (481), Expect = 3e-51
 Identities = 119/283 (42%), Positives = 155/283 (54%), Gaps = 37/283 (13%)
 Frame = +3

Query: 3    EADPWGNMA----KMKTGGSDDVVDGWGQEIGANPCNNKETCVAEDV---------WGAS 143
            EADPW NMA    K  +GGS ++ DGWG  +GA+P N        D          WG S
Sbjct: 699  EADPWSNMATATGKQTSGGSIEITDGWGLGLGADPWNKVTYANRTDAPTSDGAIGGWGNS 758

Query: 144  SSSAL---------EKAGTSGKNSDDWSEGARDVETSERDGWEKSKLSVSEAGGEWDMGN 296
            S+S L         ++AG+S   S DWS  A  V  ++ DGWEKSK SV +AGG WD  +
Sbjct: 759  SNSGLLEKASSGAGDQAGSSEIKSYDWSNKAAVVLRNDVDGWEKSKTSVDDAGGIWDNES 818

Query: 297  GLQNNACPWDSKGKEKIHHQDDAWDKAARSQEKSKDSSDVAALGWTTSDYNACSWENKGK 476
              ++NAC WDS+G  K+  ++DAWDK A+SQEKS D+ DVAA+G T S+ N CSW+NK +
Sbjct: 819  VKKSNACSWDSEGIGKMSKKEDAWDKTAKSQEKSNDNWDVAAIGQTQSNNNTCSWDNK-E 877

Query: 477  GKLSLEEDACGKFVNLQVKCSDTWDAASKGCTPSRANLNC----WDNPKTSSVSQSDDWF 644
            GK+S E+DA  K   LQ   +++ DA + G + S  N  C    WDN K+ S S S    
Sbjct: 878  GKISTEDDAWQKAAKLQDTNNNSCDAVAIGGSHSIQNHGCEVGDWDNAKSPSASLSGYRV 937

Query: 645  KADERTEAKIGGSCGAILSSQG-----------VGSATENWNK 740
            KA E  +A IG    A +S Q             G+   NWNK
Sbjct: 938  KAKENDKAVIGRLSRAGVSGQSQNCLGDNRMSPKGNYDFNWNK 980


>ref|XP_020091607.1| protein RNA-directed DNA methylation 3 isoform X5 [Ananas comosus]
          Length = 1429

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 75/256 (29%), Positives = 107/256 (41%), Gaps = 9/256 (3%)
 Frame = +3

Query: 3    EADPWGNMAKMKTGGSDDVVDGWGQEIGANPCNNKETCVAEDVWGASSSSALE-KAGTSG 179
            + DPWG+  K     SD   D W      +   N         W  S+++A   +A T  
Sbjct: 410  DVDPWGSKVK-----SDQSADTWANAAAPSGDQNSS-------WDKSTTNAASGQADTWQ 457

Query: 180  KNSDDWSEGARDVETSERDGWEKSKLSVSEAGGEWDMGNGLQNNACPWDSKGKEKIHHQD 359
             NS+DWS       TS+  GWEK K   S++GG W  GN + N     +SK        D
Sbjct: 458  NNSNDWSNKGSQKSTSDAGGWEKEKTLASDSGGSWGTGNKISNLD---NSK-----TGGD 509

Query: 360  DAWDKAARSQEKSKDSSDVAALGWTTSD---YNACSWENKGKGKLSLEEDACGKF--VNL 524
            +AWDKA+  ++K K SS      WT S+       SW+ KGK     + D  GK     +
Sbjct: 510  NAWDKASNDKDKGKGSSWNEPNNWTKSEAVTSKTDSWDVKGKAIAMDDGDTWGKAKGKGI 569

Query: 525  QVKCSDTWD-AASKGCTPSRANLNCWDNPKTSSVSQSDDWFKADER-TEAKIGGSCGAIL 698
             +   D+WD A  KG      +       K   ++  D W KA  +  E       G   
Sbjct: 570  VINEDDSWDKAKGKGIVIKEDDSWGKATGKGIVINDDDTWGKAKGKGIEMNEDDPWGRAA 629

Query: 699  SSQG-VGSATENWNKS 743
            ++Q   G+ ++NW  S
Sbjct: 630  TNQSKSGNESQNWGSS 645


>ref|XP_020091606.1| protein RNA-directed DNA methylation 3 isoform X4 [Ananas comosus]
          Length = 1705

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 75/256 (29%), Positives = 107/256 (41%), Gaps = 9/256 (3%)
 Frame = +3

Query: 3    EADPWGNMAKMKTGGSDDVVDGWGQEIGANPCNNKETCVAEDVWGASSSSALE-KAGTSG 179
            + DPWG+  K     SD   D W      +   N         W  S+++A   +A T  
Sbjct: 696  DVDPWGSKVK-----SDQSADTWANAAAPSGDQNSS-------WDKSTTNAASGQADTWQ 743

Query: 180  KNSDDWSEGARDVETSERDGWEKSKLSVSEAGGEWDMGNGLQNNACPWDSKGKEKIHHQD 359
             NS+DWS       TS+  GWEK K   S++GG W  GN + N     +SK        D
Sbjct: 744  NNSNDWSNKGSQKSTSDAGGWEKEKTLASDSGGSWGTGNKISNLD---NSK-----TGGD 795

Query: 360  DAWDKAARSQEKSKDSSDVAALGWTTSD---YNACSWENKGKGKLSLEEDACGKF--VNL 524
            +AWDKA+  ++K K SS      WT S+       SW+ KGK     + D  GK     +
Sbjct: 796  NAWDKASNDKDKGKGSSWNEPNNWTKSEAVTSKTDSWDVKGKAIAMDDGDTWGKAKGKGI 855

Query: 525  QVKCSDTWD-AASKGCTPSRANLNCWDNPKTSSVSQSDDWFKADER-TEAKIGGSCGAIL 698
             +   D+WD A  KG      +       K   ++  D W KA  +  E       G   
Sbjct: 856  VINEDDSWDKAKGKGIVIKEDDSWGKATGKGIVINDDDTWGKAKGKGIEMNEDDPWGRAA 915

Query: 699  SSQG-VGSATENWNKS 743
            ++Q   G+ ++NW  S
Sbjct: 916  TNQSKSGNESQNWGSS 931


>ref|XP_020091604.1| protein RNA-directed DNA methylation 3 isoform X2 [Ananas comosus]
          Length = 1714

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 75/256 (29%), Positives = 107/256 (41%), Gaps = 9/256 (3%)
 Frame = +3

Query: 3    EADPWGNMAKMKTGGSDDVVDGWGQEIGANPCNNKETCVAEDVWGASSSSALE-KAGTSG 179
            + DPWG+  K     SD   D W      +   N         W  S+++A   +A T  
Sbjct: 696  DVDPWGSKVK-----SDQSADTWANAAAPSGDQNSS-------WDKSTTNAASGQADTWQ 743

Query: 180  KNSDDWSEGARDVETSERDGWEKSKLSVSEAGGEWDMGNGLQNNACPWDSKGKEKIHHQD 359
             NS+DWS       TS+  GWEK K   S++GG W  GN + N     +SK        D
Sbjct: 744  NNSNDWSNKGSQKSTSDAGGWEKEKTLASDSGGSWGTGNKISNLD---NSK-----TGGD 795

Query: 360  DAWDKAARSQEKSKDSSDVAALGWTTSD---YNACSWENKGKGKLSLEEDACGKF--VNL 524
            +AWDKA+  ++K K SS      WT S+       SW+ KGK     + D  GK     +
Sbjct: 796  NAWDKASNDKDKGKGSSWNEPNNWTKSEAVTSKTDSWDVKGKAIAMDDGDTWGKAKGKGI 855

Query: 525  QVKCSDTWD-AASKGCTPSRANLNCWDNPKTSSVSQSDDWFKADER-TEAKIGGSCGAIL 698
             +   D+WD A  KG      +       K   ++  D W KA  +  E       G   
Sbjct: 856  VINEDDSWDKAKGKGIVIKEDDSWGKATGKGIVINDDDTWGKAKGKGIEMNEDDPWGRAA 915

Query: 699  SSQG-VGSATENWNKS 743
            ++Q   G+ ++NW  S
Sbjct: 916  TNQSKSGNESQNWGSS 931


>ref|XP_020091605.1| protein RNA-directed DNA methylation 3 isoform X3 [Ananas comosus]
          Length = 1714

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 75/256 (29%), Positives = 107/256 (41%), Gaps = 9/256 (3%)
 Frame = +3

Query: 3    EADPWGNMAKMKTGGSDDVVDGWGQEIGANPCNNKETCVAEDVWGASSSSALE-KAGTSG 179
            + DPWG+  K     SD   D W      +   N         W  S+++A   +A T  
Sbjct: 695  DVDPWGSKVK-----SDQSADTWANAAAPSGDQNSS-------WDKSTTNAASGQADTWQ 742

Query: 180  KNSDDWSEGARDVETSERDGWEKSKLSVSEAGGEWDMGNGLQNNACPWDSKGKEKIHHQD 359
             NS+DWS       TS+  GWEK K   S++GG W  GN + N     +SK        D
Sbjct: 743  NNSNDWSNKGSQKSTSDAGGWEKEKTLASDSGGSWGTGNKISNLD---NSK-----TGGD 794

Query: 360  DAWDKAARSQEKSKDSSDVAALGWTTSD---YNACSWENKGKGKLSLEEDACGKF--VNL 524
            +AWDKA+  ++K K SS      WT S+       SW+ KGK     + D  GK     +
Sbjct: 795  NAWDKASNDKDKGKGSSWNEPNNWTKSEAVTSKTDSWDVKGKAIAMDDGDTWGKAKGKGI 854

Query: 525  QVKCSDTWD-AASKGCTPSRANLNCWDNPKTSSVSQSDDWFKADER-TEAKIGGSCGAIL 698
             +   D+WD A  KG      +       K   ++  D W KA  +  E       G   
Sbjct: 855  VINEDDSWDKAKGKGIVIKEDDSWGKATGKGIVINDDDTWGKAKGKGIEMNEDDPWGRAA 914

Query: 699  SSQG-VGSATENWNKS 743
            ++Q   G+ ++NW  S
Sbjct: 915  TNQSKSGNESQNWGSS 930


>ref|XP_020091602.1| protein RNA-directed DNA methylation 3 isoform X1 [Ananas comosus]
          Length = 1715

 Score = 89.4 bits (220), Expect = 2e-16
 Identities = 75/256 (29%), Positives = 107/256 (41%), Gaps = 9/256 (3%)
 Frame = +3

Query: 3    EADPWGNMAKMKTGGSDDVVDGWGQEIGANPCNNKETCVAEDVWGASSSSALE-KAGTSG 179
            + DPWG+  K     SD   D W      +   N         W  S+++A   +A T  
Sbjct: 696  DVDPWGSKVK-----SDQSADTWANAAAPSGDQNSS-------WDKSTTNAASGQADTWQ 743

Query: 180  KNSDDWSEGARDVETSERDGWEKSKLSVSEAGGEWDMGNGLQNNACPWDSKGKEKIHHQD 359
             NS+DWS       TS+  GWEK K   S++GG W  GN + N     +SK        D
Sbjct: 744  NNSNDWSNKGSQKSTSDAGGWEKEKTLASDSGGSWGTGNKISNLD---NSK-----TGGD 795

Query: 360  DAWDKAARSQEKSKDSSDVAALGWTTSD---YNACSWENKGKGKLSLEEDACGKF--VNL 524
            +AWDKA+  ++K K SS      WT S+       SW+ KGK     + D  GK     +
Sbjct: 796  NAWDKASNDKDKGKGSSWNEPNNWTKSEAVTSKTDSWDVKGKAIAMDDGDTWGKAKGKGI 855

Query: 525  QVKCSDTWD-AASKGCTPSRANLNCWDNPKTSSVSQSDDWFKADER-TEAKIGGSCGAIL 698
             +   D+WD A  KG      +       K   ++  D W KA  +  E       G   
Sbjct: 856  VINEDDSWDKAKGKGIVIKEDDSWGKATGKGIVINDDDTWGKAKGKGIEMNEDDPWGRAA 915

Query: 699  SSQG-VGSATENWNKS 743
            ++Q   G+ ++NW  S
Sbjct: 916  TNQSKSGNESQNWGSS 931


>gb|OAY66311.1| Protein RNA-directed DNA methylation 3 [Ananas comosus]
          Length = 1701

 Score = 88.2 bits (217), Expect = 4e-16
 Identities = 75/256 (29%), Positives = 106/256 (41%), Gaps = 9/256 (3%)
 Frame = +3

Query: 3    EADPWGNMAKMKTGGSDDVVDGWGQEIGANPCNNKETCVAEDVWGASSSSALE-KAGTSG 179
            + DPWG+  K     SD   D W      +   N         W  S+++A   +A T  
Sbjct: 692  DVDPWGSKVK-----SDQSADTWANAAAPSGDQNSS-------WDKSTTNAASGQADTWQ 739

Query: 180  KNSDDWSEGARDVETSERDGWEKSKLSVSEAGGEWDMGNGLQNNACPWDSKGKEKIHHQD 359
             NS+DWS       TS+  GWEK K   S++GG W  GN   N     +SK        D
Sbjct: 740  NNSNDWSNKGSQKSTSDAGGWEKEKTLASDSGGSWGTGNKTSNLD---NSK-----TGGD 791

Query: 360  DAWDKAARSQEKSKDSSDVAALGWTTSD---YNACSWENKGKGKLSLEEDACGKF--VNL 524
            +AWDKA+  ++K K SS      WT S+       SW+ KGK     + D  GK     +
Sbjct: 792  NAWDKASNDKDKGKGSSWNEPNNWTKSEAVTSKTDSWDVKGKAIAMDDGDTWGKAKGKGI 851

Query: 525  QVKCSDTWD-AASKGCTPSRANLNCWDNPKTSSVSQSDDWFKADER-TEAKIGGSCGAIL 698
             +   D+WD A  KG      +       K   ++  D W KA  +  E       G   
Sbjct: 852  VINEDDSWDKAKGKGIVIKEDDSWGKATGKGIVINDDDTWGKAKGKGIEMNEDDPWGRAA 911

Query: 699  SSQG-VGSATENWNKS 743
            ++Q   G+ ++NW  S
Sbjct: 912  TNQSKSGNESQNWGSS 927


>ref|XP_010933212.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X4 [Elaeis
            guineensis]
          Length = 2066

 Score = 87.4 bits (215), Expect = 8e-16
 Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 54/277 (19%)
 Frame = +3

Query: 3    EADPWGNM----AKMKTGGSDDVVDGWGQEIGANPCNNKETCVAEDVWGASSSSALEKAG 170
            +ADPWG+     A+     S   +DGWG+  G++   + +  +      A+     ++A 
Sbjct: 683  DADPWGSKVLSGARADAWHSSKAMDGWGKAAGSSGEQDSQWNMT-----AAGDKVTDQAR 737

Query: 171  TSGKNSDDWSEGARDVETSERDGWEKSKLSVSEAGGEWDMGN-GLQNNACPWDSKGKEKI 347
               +++D W+  A    ++E D  +K K   S+AGG W  G+ G  NN  P ++      
Sbjct: 738  NCIEDADGWNGKALAKTSTEIDESKKPKPQSSDAGG-WGRGDFGSGNNLDPTENVSGNWD 796

Query: 348  HHQDD-------------AWDKAARSQEKSKDSSDVAALGWT----TSDYNACSWENKGK 476
              +DD              WD+AA S++K KD S   +  WT     S   A  W+ KGK
Sbjct: 797  KQRDDDLGDSRKNSDGVSGWDRAATSKDKGKDLSWDQSNNWTHPEVVSIDKASCWDVKGK 856

Query: 477  GKLSLEEDACGKFVNL-----------------QVKCSDT-----------WDAASKGCT 572
            G +S E+D+ GK                     Q+K  DT           WDAA+  CT
Sbjct: 857  GIISNEDDSWGKAARFREKNTNEDWGKFSVGSSQIKEKDTARSDGGEQADRWDAAASNCT 916

Query: 573  PSR----ANLNCWDNPKTSSVSQSDDWFKADERTEAK 671
             S          WD  +   V + D+W K++++++A+
Sbjct: 917  QSSVQHGGQSRSWDKARDLHVGRLDNWGKSEDKSKAE 953



 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 76/265 (28%), Positives = 111/265 (41%), Gaps = 53/265 (20%)
 Frame = +3

Query: 72   GQEIGANPCNNKETCVA-EDVWGASSSS---------------ALEKAGTSGKNSDDWSE 203
            GQE  A+PC +K    A +D W +S ++                L KA    K  D+  +
Sbjct: 1414 GQEYEADPCGSKVAYGARDDAWNSSKAADNWGKAADLHMEQITPLRKATVGEKAIDEGRD 1473

Query: 204  G--ARDVETSER---------DGWEKSK-LSVSEAGGEWDMGNGLQNN------------ 311
            G  ++D +   R         DG EK+K L   +AGG WD     ++             
Sbjct: 1474 GDCSKDTDGWNRTSFKSSPGIDGCEKAKELPSMDAGGSWDKAESNKDKGKGVSWDNPSSW 1533

Query: 312  ACP----------WDSKGKEKIHHQDDAWDKAARSQEKSKDSSDVAALGWTTSDYNACSW 461
            ACP          WD KGK  + +++D W K+++SQE   +S           D+ + S 
Sbjct: 1534 ACPEVVSNDKANVWDIKGKGVVRNEEDVWGKSSKSQENKNES----------KDWGSNSS 1583

Query: 462  ENKGKGKLSLEEDACGKFVNLQVKCSDTWDAASKGCTPSRAN---LNCWDNPKTSSVSQS 632
            +N+       EED   KF+      ++ WDAA+   T S A+      WD        QS
Sbjct: 1584 QNR-------EEDY--KFIG--GSKANNWDAAASHWTQSAAHGGQSTSWDKANDPHSGQS 1632

Query: 633  DDWFKADERTEAKIGGSCGAILSSQ 707
            D+W KA E+ EA+ GG      SSQ
Sbjct: 1633 DNWGKAREKNEAEAGGWSKTGFSSQ 1657


>ref|XP_010933206.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X3 [Elaeis
            guineensis]
          Length = 2067

 Score = 87.4 bits (215), Expect = 8e-16
 Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 54/277 (19%)
 Frame = +3

Query: 3    EADPWGNM----AKMKTGGSDDVVDGWGQEIGANPCNNKETCVAEDVWGASSSSALEKAG 170
            +ADPWG+     A+     S   +DGWG+  G++   + +  +      A+     ++A 
Sbjct: 684  DADPWGSKVLSGARADAWHSSKAMDGWGKAAGSSGEQDSQWNMT-----AAGDKVTDQAR 738

Query: 171  TSGKNSDDWSEGARDVETSERDGWEKSKLSVSEAGGEWDMGN-GLQNNACPWDSKGKEKI 347
               +++D W+  A    ++E D  +K K   S+AGG W  G+ G  NN  P ++      
Sbjct: 739  NCIEDADGWNGKALAKTSTEIDESKKPKPQSSDAGG-WGRGDFGSGNNLDPTENVSGNWD 797

Query: 348  HHQDD-------------AWDKAARSQEKSKDSSDVAALGWT----TSDYNACSWENKGK 476
              +DD              WD+AA S++K KD S   +  WT     S   A  W+ KGK
Sbjct: 798  KQRDDDLGDSRKNSDGVSGWDRAATSKDKGKDLSWDQSNNWTHPEVVSIDKASCWDVKGK 857

Query: 477  GKLSLEEDACGKFVNL-----------------QVKCSDT-----------WDAASKGCT 572
            G +S E+D+ GK                     Q+K  DT           WDAA+  CT
Sbjct: 858  GIISNEDDSWGKAARFREKNTNEDWGKFSVGSSQIKEKDTARSDGGEQADRWDAAASNCT 917

Query: 573  PSR----ANLNCWDNPKTSSVSQSDDWFKADERTEAK 671
             S          WD  +   V + D+W K++++++A+
Sbjct: 918  QSSVQHGGQSRSWDKARDLHVGRLDNWGKSEDKSKAE 954



 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 76/265 (28%), Positives = 111/265 (41%), Gaps = 53/265 (20%)
 Frame = +3

Query: 72   GQEIGANPCNNKETCVA-EDVWGASSSS---------------ALEKAGTSGKNSDDWSE 203
            GQE  A+PC +K    A +D W +S ++                L KA    K  D+  +
Sbjct: 1415 GQEYEADPCGSKVAYGARDDAWNSSKAADNWGKAADLHMEQITPLRKATVGEKAIDEGRD 1474

Query: 204  G--ARDVETSER---------DGWEKSK-LSVSEAGGEWDMGNGLQNN------------ 311
            G  ++D +   R         DG EK+K L   +AGG WD     ++             
Sbjct: 1475 GDCSKDTDGWNRTSFKSSPGIDGCEKAKELPSMDAGGSWDKAESNKDKGKGVSWDNPSSW 1534

Query: 312  ACP----------WDSKGKEKIHHQDDAWDKAARSQEKSKDSSDVAALGWTTSDYNACSW 461
            ACP          WD KGK  + +++D W K+++SQE   +S           D+ + S 
Sbjct: 1535 ACPEVVSNDKANVWDIKGKGVVRNEEDVWGKSSKSQENKNES----------KDWGSNSS 1584

Query: 462  ENKGKGKLSLEEDACGKFVNLQVKCSDTWDAASKGCTPSRAN---LNCWDNPKTSSVSQS 632
            +N+       EED   KF+      ++ WDAA+   T S A+      WD        QS
Sbjct: 1585 QNR-------EEDY--KFIG--GSKANNWDAAASHWTQSAAHGGQSTSWDKANDPHSGQS 1633

Query: 633  DDWFKADERTEAKIGGSCGAILSSQ 707
            D+W KA E+ EA+ GG      SSQ
Sbjct: 1634 DNWGKAREKNEAEAGGWSKTGFSSQ 1658


>ref|XP_010933199.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X2 [Elaeis
            guineensis]
          Length = 2068

 Score = 87.4 bits (215), Expect = 8e-16
 Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 54/277 (19%)
 Frame = +3

Query: 3    EADPWGNM----AKMKTGGSDDVVDGWGQEIGANPCNNKETCVAEDVWGASSSSALEKAG 170
            +ADPWG+     A+     S   +DGWG+  G++   + +  +      A+     ++A 
Sbjct: 685  DADPWGSKVLSGARADAWHSSKAMDGWGKAAGSSGEQDSQWNMT-----AAGDKVTDQAR 739

Query: 171  TSGKNSDDWSEGARDVETSERDGWEKSKLSVSEAGGEWDMGN-GLQNNACPWDSKGKEKI 347
               +++D W+  A    ++E D  +K K   S+AGG W  G+ G  NN  P ++      
Sbjct: 740  NCIEDADGWNGKALAKTSTEIDESKKPKPQSSDAGG-WGRGDFGSGNNLDPTENVSGNWD 798

Query: 348  HHQDD-------------AWDKAARSQEKSKDSSDVAALGWT----TSDYNACSWENKGK 476
              +DD              WD+AA S++K KD S   +  WT     S   A  W+ KGK
Sbjct: 799  KQRDDDLGDSRKNSDGVSGWDRAATSKDKGKDLSWDQSNNWTHPEVVSIDKASCWDVKGK 858

Query: 477  GKLSLEEDACGKFVNL-----------------QVKCSDT-----------WDAASKGCT 572
            G +S E+D+ GK                     Q+K  DT           WDAA+  CT
Sbjct: 859  GIISNEDDSWGKAARFREKNTNEDWGKFSVGSSQIKEKDTARSDGGEQADRWDAAASNCT 918

Query: 573  PSR----ANLNCWDNPKTSSVSQSDDWFKADERTEAK 671
             S          WD  +   V + D+W K++++++A+
Sbjct: 919  QSSVQHGGQSRSWDKARDLHVGRLDNWGKSEDKSKAE 955



 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 76/265 (28%), Positives = 111/265 (41%), Gaps = 53/265 (20%)
 Frame = +3

Query: 72   GQEIGANPCNNKETCVA-EDVWGASSSS---------------ALEKAGTSGKNSDDWSE 203
            GQE  A+PC +K    A +D W +S ++                L KA    K  D+  +
Sbjct: 1416 GQEYEADPCGSKVAYGARDDAWNSSKAADNWGKAADLHMEQITPLRKATVGEKAIDEGRD 1475

Query: 204  G--ARDVETSER---------DGWEKSK-LSVSEAGGEWDMGNGLQNN------------ 311
            G  ++D +   R         DG EK+K L   +AGG WD     ++             
Sbjct: 1476 GDCSKDTDGWNRTSFKSSPGIDGCEKAKELPSMDAGGSWDKAESNKDKGKGVSWDNPSSW 1535

Query: 312  ACP----------WDSKGKEKIHHQDDAWDKAARSQEKSKDSSDVAALGWTTSDYNACSW 461
            ACP          WD KGK  + +++D W K+++SQE   +S           D+ + S 
Sbjct: 1536 ACPEVVSNDKANVWDIKGKGVVRNEEDVWGKSSKSQENKNES----------KDWGSNSS 1585

Query: 462  ENKGKGKLSLEEDACGKFVNLQVKCSDTWDAASKGCTPSRAN---LNCWDNPKTSSVSQS 632
            +N+       EED   KF+      ++ WDAA+   T S A+      WD        QS
Sbjct: 1586 QNR-------EEDY--KFIG--GSKANNWDAAASHWTQSAAHGGQSTSWDKANDPHSGQS 1634

Query: 633  DDWFKADERTEAKIGGSCGAILSSQ 707
            D+W KA E+ EA+ GG      SSQ
Sbjct: 1635 DNWGKAREKNEAEAGGWSKTGFSSQ 1659


>ref|XP_010933194.1| PREDICTED: protein RNA-directed DNA methylation 3 isoform X1 [Elaeis
            guineensis]
          Length = 2069

 Score = 87.4 bits (215), Expect = 8e-16
 Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 54/277 (19%)
 Frame = +3

Query: 3    EADPWGNM----AKMKTGGSDDVVDGWGQEIGANPCNNKETCVAEDVWGASSSSALEKAG 170
            +ADPWG+     A+     S   +DGWG+  G++   + +  +      A+     ++A 
Sbjct: 686  DADPWGSKVLSGARADAWHSSKAMDGWGKAAGSSGEQDSQWNMT-----AAGDKVTDQAR 740

Query: 171  TSGKNSDDWSEGARDVETSERDGWEKSKLSVSEAGGEWDMGN-GLQNNACPWDSKGKEKI 347
               +++D W+  A    ++E D  +K K   S+AGG W  G+ G  NN  P ++      
Sbjct: 741  NCIEDADGWNGKALAKTSTEIDESKKPKPQSSDAGG-WGRGDFGSGNNLDPTENVSGNWD 799

Query: 348  HHQDD-------------AWDKAARSQEKSKDSSDVAALGWT----TSDYNACSWENKGK 476
              +DD              WD+AA S++K KD S   +  WT     S   A  W+ KGK
Sbjct: 800  KQRDDDLGDSRKNSDGVSGWDRAATSKDKGKDLSWDQSNNWTHPEVVSIDKASCWDVKGK 859

Query: 477  GKLSLEEDACGKFVNL-----------------QVKCSDT-----------WDAASKGCT 572
            G +S E+D+ GK                     Q+K  DT           WDAA+  CT
Sbjct: 860  GIISNEDDSWGKAARFREKNTNEDWGKFSVGSSQIKEKDTARSDGGEQADRWDAAASNCT 919

Query: 573  PSR----ANLNCWDNPKTSSVSQSDDWFKADERTEAK 671
             S          WD  +   V + D+W K++++++A+
Sbjct: 920  QSSVQHGGQSRSWDKARDLHVGRLDNWGKSEDKSKAE 956



 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 76/265 (28%), Positives = 111/265 (41%), Gaps = 53/265 (20%)
 Frame = +3

Query: 72   GQEIGANPCNNKETCVA-EDVWGASSSS---------------ALEKAGTSGKNSDDWSE 203
            GQE  A+PC +K    A +D W +S ++                L KA    K  D+  +
Sbjct: 1417 GQEYEADPCGSKVAYGARDDAWNSSKAADNWGKAADLHMEQITPLRKATVGEKAIDEGRD 1476

Query: 204  G--ARDVETSER---------DGWEKSK-LSVSEAGGEWDMGNGLQNN------------ 311
            G  ++D +   R         DG EK+K L   +AGG WD     ++             
Sbjct: 1477 GDCSKDTDGWNRTSFKSSPGIDGCEKAKELPSMDAGGSWDKAESNKDKGKGVSWDNPSSW 1536

Query: 312  ACP----------WDSKGKEKIHHQDDAWDKAARSQEKSKDSSDVAALGWTTSDYNACSW 461
            ACP          WD KGK  + +++D W K+++SQE   +S           D+ + S 
Sbjct: 1537 ACPEVVSNDKANVWDIKGKGVVRNEEDVWGKSSKSQENKNES----------KDWGSNSS 1586

Query: 462  ENKGKGKLSLEEDACGKFVNLQVKCSDTWDAASKGCTPSRAN---LNCWDNPKTSSVSQS 632
            +N+       EED   KF+      ++ WDAA+   T S A+      WD        QS
Sbjct: 1587 QNR-------EEDY--KFIG--GSKANNWDAAASHWTQSAAHGGQSTSWDKANDPHSGQS 1635

Query: 633  DDWFKADERTEAKIGGSCGAILSSQ 707
            D+W KA E+ EA+ GG      SSQ
Sbjct: 1636 DNWGKAREKNEAEAGGWSKTGFSSQ 1660


>ref|XP_008794002.1| PREDICTED: protein RNA-directed DNA methylation 3 [Phoenix
            dactylifera]
          Length = 2039

 Score = 84.7 bits (208), Expect = 6e-15
 Identities = 77/301 (25%), Positives = 124/301 (41%), Gaps = 54/301 (17%)
 Frame = +3

Query: 3    EADPWGNM----AKMKTGGSDDVVDGWGQEIGANPCNNKETCVAEDVWGASSSSALEKAG 170
            +ADPWG+     A+     S   +DGWG+   ++   + +  +      A+     ++A 
Sbjct: 681  DADPWGSKVISGARADAWHSSKAMDGWGKAASSSGEQDSQWNMT-----AAGEKVTDQAR 735

Query: 171  TSGKNSDDWSEGARDVETSERDGWEKSKLSVSEAGGEWDMGN-GLQNNACP-------WD 326
               +++D W+  A    ++E DG +KSK      GG W  GN G  NN  P       WD
Sbjct: 736  NCIEDADGWNGKALAKTSTEIDGSKKSKPQSGGDGG-WGRGNFGSGNNLDPSENVTGNWD 794

Query: 327  SKGK----EKIHHQD--DAWDKAARSQEKSKDSSDVAALGWT----TSDYNACSWENKGK 476
             +      + + + D    WD+AA S++K KD S   +  WT     S+    SW+ KGK
Sbjct: 795  KQRADNLGDSLKNSDGVSGWDRAATSKDKGKDLSWDRSNNWTRPEVVSNDKVSSWDVKGK 854

Query: 477  GKLSLEEDACGKFVNLQVK----------------------------CSDTWDAASKGCT 572
              +S E+D+ GK  + Q K                             +D WDAA+   T
Sbjct: 855  AIISNEDDSWGKAASTQEKNTNENWGKFSVGSGQIKEKDATRSDGGEQADRWDAAASNWT 914

Query: 573  PSR----ANLNCWDNPKTSSVSQSDDWFKADERTEAKIGGSCGAILSSQGVGSATENWNK 740
             S        + WD  +     + D+W K+++++EA+                 T +WNK
Sbjct: 915  QSAVQHGGQSSSWDKARNLHAGRLDNWGKSNDKSEAE-----------------TRDWNK 957

Query: 741  S 743
            S
Sbjct: 958  S 958



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 70/267 (26%), Positives = 109/267 (40%), Gaps = 32/267 (11%)
 Frame = +3

Query: 3    EADPWGNMAKMKTGG----SDDVVDGWGQEIGANPCNNKETCVAEDVWGASSSSALEKA- 167
            EADPWG+       G    S    D WG+  G         C+ E++   S ++  E+A 
Sbjct: 1392 EADPWGSKVAYGARGDAWNSRKAADNWGKATGL--------CI-EEISPLSKATVGERAI 1442

Query: 168  -----GTSGKNSDDWSEGARDVETSERDGWEKSKLSVS-EAGGEWDM-------GNGLQN 308
                 G   K++D W+   +       DG EK+++  S +AG  WD        G G+  
Sbjct: 1443 DVGQDGDCPKDADGWNRTFKSGPGI--DGCEKAEVLPSMDAGQSWDKAETSKDKGKGVSW 1500

Query: 309  N-----ACP---------WDSKGKEKIHHQDDAWDKAARSQEKSKDSSDVAALGWTTSDY 446
            +     ACP         WD K K  + ++ D W K+++ QE + +          T D+
Sbjct: 1501 DKPSSWACPEVSNDKADVWDIKDKGLVRNEVDVWGKSSKCQENNNE----------TKDW 1550

Query: 447  NACSWENKGKGKLSLEEDACGKFVNLQVKCSDTWDAASKGCTPSRANLNCWDNPKTSSVS 626
             + S +N+   K         K  NL    S    +A++G        + WD+       
Sbjct: 1551 GSNSSQNREDNKFI----GGNKANNLDAAASHGTQSAARG-----GQSSSWDH-----CG 1596

Query: 627  QSDDWFKADERTEAKIGGSCGAILSSQ 707
            Q+D+W KA E+ EA+ GG      SSQ
Sbjct: 1597 QTDNWGKAREKNEAEAGGWSKTGFSSQ 1623


>dbj|BAJ86774.1| predicted protein, partial [Hordeum vulgare subsp. vulgare]
          Length = 939

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 72/275 (26%), Positives = 108/275 (39%), Gaps = 28/275 (10%)
 Frame = +3

Query: 3   EADPWGNMAKMKTGGSDDVVDGWGQEIGANPCNNKETCVAEDVWG-------ASSSSALE 161
           EADPW    K  T  +D   D WG         NK T  A D+W        +SS++A  
Sbjct: 90  EADPW---CKKPTSSADGDSDPWG---------NKTTSAAVDIWNNSTTQNESSSNNAWG 137

Query: 162 K-AGTSGKNS--DDWSEGARDVETSERDGWEKSKLSVSEA-GGEWDMGNGLQNNACPWDS 329
           K AG  G ++    W  GA + ++ +   W ++   V  A GG+ D          PW S
Sbjct: 138 KQAGGGGLDAGGSSWGGGAVNKDSEKSGNWGEACKQVDTATGGDTD----------PWGS 187

Query: 330 KGKEKIHHQDDAWDKAARSQEKSKDSSDVAALGWTTSDYNACSWENKGKGKLSLEEDACG 509
           K KE I  + D+W+K++ S EK  +       GW        S E++ K  +  + D  G
Sbjct: 188 KVKEVITKEADSWEKSSWSPEKKLEGD---GQGW--GQPFGKSNEDQEKNTVPNDADKGG 242

Query: 510 KFVNLQVKCSDTWDAASKGCTPSRANLNCWDNPKTSSVSQSDDWFKADERTEAKIGGSCG 689
                      +WD+ +  C  S  + + W    T  V+Q D W K+ +  +    G   
Sbjct: 243 -----------SWDSTAAICVGS--DNDAWAKSATLPVAQDDAWGKSKDSGQNSASGGWD 289

Query: 690 AILSSQG-----------------VGSATENWNKS 743
            +   QG                   + T NWNK+
Sbjct: 290 TVAVGQGQDEAWGKPKDSGAKSEETNNGTGNWNKA 324


>gb|EMS65052.1| hypothetical protein TRIUR3_18947 [Triticum urartu]
          Length = 1631

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 67/254 (26%), Positives = 101/254 (39%), Gaps = 11/254 (4%)
 Frame = +3

Query: 3    EADPWGNMAKMKTGGSDDVVDGWGQEIGANPCNNKETCVAEDVWGASSSSAL-------- 158
            EADPW   +K  T  +D   D WG         NK T  A D+W  S++           
Sbjct: 793  EADPW---SKKPTSSADGDSDPWG---------NKTTSAAVDIWNNSTTQKESSTDNAWG 840

Query: 159  EKAGTSGKNS--DDWSEGARDVETSERDGWEKSKLSVSEA-GGEWDMGNGLQNNACPWDS 329
            ++AG  G ++    W  GA + ++ +   W ++   V  A GG+ D          PW S
Sbjct: 841  KEAGGGGFDAGGSSWGGGAVNKDSEKSGNWGEACKQVDTATGGDTD----------PWGS 890

Query: 330  KGKEKIHHQDDAWDKAARSQEKSKDSSDVAALGWTTSDYNACSWENKGKGKLSLEEDACG 509
            K KE +  + D+W+K++ S EK  +       GW        S +++ KG +  + D  G
Sbjct: 891  KVKEVVMKEADSWEKSSWSPEKKLEGD---GQGW--GQPFGKSNQDQEKGTVPKDADKGG 945

Query: 510  KFVNLQVKCSDTWDAASKGCTPSRANLNCWDNPKTSSVSQSDDWFKADERTEAKIGGSCG 689
                       +WD     C  S  N + W    T  V+Q D W K+ E  +    G   
Sbjct: 946  -----------SWDTTVAICVGSDDN-DAWAKSATLPVAQDDAWGKSKESGQNSGSGGWD 993

Query: 690  AILSSQGVGSATEN 731
             +   QG   A  N
Sbjct: 994  TVAVGQGQDEAWGN 1007


>ref|XP_021618534.1| protein RNA-directed DNA methylation 3 isoform X3 [Manihot esculenta]
          Length = 1752

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 73/292 (25%), Positives = 108/292 (36%), Gaps = 45/292 (15%)
 Frame = +3

Query: 3    EADPWGNMAKMKTG-GSDDVVDGWGQEIGANPCNNKETCVAEDVWGASSSSALEKAGTSG 179
            ++  WG  A    G  ++D V GWG+               ED W   +++     G+SG
Sbjct: 720  QSSSWGAAASDDKGDANNDQVHGWGK--------------TEDCWNKVAANV----GSSG 761

Query: 180  KNSDDWSEGARDVETS-----ERDGWEKSKL----SVSEAGGEWDMGN-GLQNNACPWD- 326
              S  W +     E S       DGW +SKL    S ++A   WD G   + N  C W  
Sbjct: 762  GASVGWGKATLPSENSGASRESGDGWGQSKLNAGNSTTDAAAGWDKGKTAIGNPTCSWGD 821

Query: 327  -SKGKEKIHHQDDAWDKAARSQEKSKDSSDV-----AALGWTTS-DYNACSWENKGKGKL 485
             + GK ++       D       KSK SS        A GW      N  +W +  + + 
Sbjct: 822  IATGKNQLESWGSGKDVVESGSWKSKSSSAGDDDWNKAAGWNQQKSQNNDTWGSTAEAQK 881

Query: 486  S--LEEDACGKFVNLQVKCSDTWD---------AASKGCTPSRANLNCWDNPKTSSVSQS 632
            +  ++ED+ GK  N      D W+         + +KG T       CW  P + +   +
Sbjct: 882  NGTVQEDSWGKRSNAG---EDQWNKGAGWNQQNSLNKGDTRGGTEGGCWGQPDSGNADGA 938

Query: 633  DDWFK---------------ADERTEAKIGGSCGAILSSQGVGSATENWNKS 743
              W K               A++ T    GGSCG         +  +NWNKS
Sbjct: 939  SGWTKDFSSQTANWGNQKNHAEDATGWNKGGSCGQ--------NQADNWNKS 982


>ref|XP_021618533.1| protein RNA-directed DNA methylation 3 isoform X2 [Manihot esculenta]
 gb|OAY45822.1| hypothetical protein MANES_07G094600 [Manihot esculenta]
          Length = 1752

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 73/292 (25%), Positives = 108/292 (36%), Gaps = 45/292 (15%)
 Frame = +3

Query: 3    EADPWGNMAKMKTG-GSDDVVDGWGQEIGANPCNNKETCVAEDVWGASSSSALEKAGTSG 179
            ++  WG  A    G  ++D V GWG+               ED W   +++     G+SG
Sbjct: 720  QSSSWGAAASDDKGDANNDQVHGWGK--------------TEDCWNKVAANV----GSSG 761

Query: 180  KNSDDWSEGARDVETS-----ERDGWEKSKL----SVSEAGGEWDMGN-GLQNNACPWD- 326
              S  W +     E S       DGW +SKL    S ++A   WD G   + N  C W  
Sbjct: 762  GASVGWGKATLPSENSGASRESGDGWGQSKLNAGNSTTDAAAGWDKGKTAIGNPTCSWGD 821

Query: 327  -SKGKEKIHHQDDAWDKAARSQEKSKDSSDV-----AALGWTTS-DYNACSWENKGKGKL 485
             + GK ++       D       KSK SS        A GW      N  +W +  + + 
Sbjct: 822  IATGKNQLESWGSGKDVVESGSWKSKSSSAGDDDWNKAAGWNQQKSQNNDTWGSTAEAQK 881

Query: 486  S--LEEDACGKFVNLQVKCSDTWD---------AASKGCTPSRANLNCWDNPKTSSVSQS 632
            +  ++ED+ GK  N      D W+         + +KG T       CW  P + +   +
Sbjct: 882  NGTVQEDSWGKRSNAG---EDQWNKGAGWNQQNSLNKGDTRGGTEGGCWGQPDSGNADGA 938

Query: 633  DDWFK---------------ADERTEAKIGGSCGAILSSQGVGSATENWNKS 743
              W K               A++ T    GGSCG         +  +NWNKS
Sbjct: 939  SGWTKDFSSQTANWGNQKNHAEDATGWNKGGSCGQ--------NQADNWNKS 982


>ref|XP_021618532.1| protein RNA-directed DNA methylation 3 isoform X1 [Manihot esculenta]
          Length = 1753

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 73/292 (25%), Positives = 108/292 (36%), Gaps = 45/292 (15%)
 Frame = +3

Query: 3    EADPWGNMAKMKTG-GSDDVVDGWGQEIGANPCNNKETCVAEDVWGASSSSALEKAGTSG 179
            ++  WG  A    G  ++D V GWG+               ED W   +++     G+SG
Sbjct: 721  QSSSWGAAASDDKGDANNDQVHGWGK--------------TEDCWNKVAANV----GSSG 762

Query: 180  KNSDDWSEGARDVETS-----ERDGWEKSKL----SVSEAGGEWDMGN-GLQNNACPWD- 326
              S  W +     E S       DGW +SKL    S ++A   WD G   + N  C W  
Sbjct: 763  GASVGWGKATLPSENSGASRESGDGWGQSKLNAGNSTTDAAAGWDKGKTAIGNPTCSWGD 822

Query: 327  -SKGKEKIHHQDDAWDKAARSQEKSKDSSDV-----AALGWTTS-DYNACSWENKGKGKL 485
             + GK ++       D       KSK SS        A GW      N  +W +  + + 
Sbjct: 823  IATGKNQLESWGSGKDVVESGSWKSKSSSAGDDDWNKAAGWNQQKSQNNDTWGSTAEAQK 882

Query: 486  S--LEEDACGKFVNLQVKCSDTWD---------AASKGCTPSRANLNCWDNPKTSSVSQS 632
            +  ++ED+ GK  N      D W+         + +KG T       CW  P + +   +
Sbjct: 883  NGTVQEDSWGKRSNAG---EDQWNKGAGWNQQNSLNKGDTRGGTEGGCWGQPDSGNADGA 939

Query: 633  DDWFK---------------ADERTEAKIGGSCGAILSSQGVGSATENWNKS 743
              W K               A++ T    GGSCG         +  +NWNKS
Sbjct: 940  SGWTKDFSSQTANWGNQKNHAEDATGWNKGGSCGQ--------NQADNWNKS 983


>ref|XP_006654614.2| PREDICTED: protein RNA-directed DNA methylation 3 [Oryza brachyantha]
          Length = 1385

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 68/257 (26%), Positives = 102/257 (39%), Gaps = 9/257 (3%)
 Frame = +3

Query: 3    EADPWGNMAKMKTGGSDDVVDGWGQ-------EIGANPCNNKETCVAEDVWGASSSSALE 161
            EADPW    K  T  ++D  D WG        E+  N    KE   ++D W        +
Sbjct: 631  EADPW---CKKTTSTANDS-DPWGMKTKSASLEVWNNSTTQKEKS-SDDAWD-------K 678

Query: 162  KAGTSGKN--SDDWSEGARDVETSERDGWEKSKLSVSEAGGEWDMGNGLQNNACPWDSKG 335
            + G SG N     W     D E+ + D W ++   + +   + D          PW SK 
Sbjct: 679  QPGGSGSNIGGSSWDRTTVDKESGKSDSWGEACKEMDKTASDTD----------PWGSKV 728

Query: 336  KEKIHHQDDAWDKAARSQEKSKDSSDVAALGWTTSDYNACSWENKGKGKLSLEEDACGKF 515
            KE    + D W K++   EKS+++S     GW           N+ + K++ +  A    
Sbjct: 729  KEVDLKETDNWGKSSMQPEKSEENSH----GWG----QPIGRSNRDQEKVAEKSGAW--- 777

Query: 516  VNLQVKCSDTWDAASKGCTPSRANLNCWDNPKTSSVSQSDDWFKADERTEAKIGGSCGAI 695
                    DT  A S    P   + + W    T  V+Q D W K+ +++     G     
Sbjct: 778  --------DTVIAGSSSSAPGIGDGDSWVKTDTFPVAQ-DAWGKSKDKSSDGAAG-WNER 827

Query: 696  LSSQGVGSATENWNKSS 746
             S+Q  G+A  NWNKSS
Sbjct: 828  TSNQSHGTAAGNWNKSS 844



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 64/274 (23%), Positives = 105/274 (38%), Gaps = 29/274 (10%)
 Frame = +3

Query: 3    EADPWGNMAKMKTGGSDDVVDGWGQEIGANPCNNKETCVAEDVWG---ASSSSALEKAGT 173
            E D WG  + M+   S++   GWGQ IG +  + ++       W    A SSS+    G 
Sbjct: 735  ETDNWGK-SSMQPEKSEENSHGWGQPIGRSNRDQEKVAEKSGAWDTVIAGSSSSAPGIG- 792

Query: 174  SGKNSDDWSEGARDVETSERDGWEKSKLSVSEAGGEWDMGNGLQNNACPWDSKGKEK-IH 350
               + D W +   D     +D W KSK   S+    W+     Q++     +  K   + 
Sbjct: 793  ---DGDSWVK--TDTFPVAQDAWGKSKDKSSDGAAGWNERTSNQSHGTAAGNWNKSSDVD 847

Query: 351  HQDDAWDKA----ARSQEKSKDSSD------------VAALGWTTSDYN-ACSWENKGKG 479
             + DAW KA     +S EK+ +  +             ++ G  +SD N A +W +    
Sbjct: 848  GEKDAWGKAKDTTTKSDEKNNEGGNWNAPNSSIDQPWSSSRGTKSSDENRASTWNSSEDK 907

Query: 480  KLSLEEDACGKFVNLQVKC-----SDTWDAASKGCTPSRANLNCWDNPKTSSVSQSDDWF 644
            K S  ++    + +          SD W   ++G + S      WDN  +    Q+D W 
Sbjct: 908  KPSGGQEQGDAWTSKMTSAGAEDKSDGWGTKTEGNSGSTGGK--WDNASSGEERQTDPWG 965

Query: 645  KADERTEAKIGGS---CGAILSSQGVGSATENWN 737
               + T+ K   +    G + SS         WN
Sbjct: 966  SKIDSTKGKEQETDPWTGKVTSSADAEDNNNGWN 999


>ref|XP_014522827.1| LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit 1 [Vigna
            radiata var. radiata]
          Length = 2006

 Score = 63.5 bits (153), Expect = 9e-08
 Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 21/264 (7%)
 Frame = +3

Query: 15   WGN-MAKMKTGGSDDVVDGWGQEIGANPCNNKETCVAEDVWGA-----SSSSALEKAGTS 176
            WGN  +++ TGGS++V D WG + G +     +   A   WG      + + + E +G  
Sbjct: 1446 WGNNKSEIPTGGSENVRDSWGSDKGKDDVTQVDNS-AHGSWGGNRRDQTKAKSNEWSGWG 1504

Query: 177  GKNSDDWSEGARDVETSERDGWEKSKLSVSEAG----GEWDMGN--GLQNNACPWDSKGK 338
               S+  S G+++V     D W  SKL+ ++ G    G W   +   +++ +  W   GK
Sbjct: 1505 RNQSEMQSGGSKNV---REDSWGSSKLNDTQNGNSESGAWGASSKGQIESKSNEWSGWGK 1561

Query: 339  EK------IHHQDDAWDKAARSQEKSKDSSDVAALGWTTS---DYNACSWENKGKGKLSL 491
             K        +  D+W    R      D+S+  A G  ++   +  +  W   GK K   
Sbjct: 1562 NKSEKASEFENVQDSWGSGKRKDVTQVDNSESGAWGARSTGQIESKSNEWSGWGKNK--- 1618

Query: 492  EEDACGKFVNLQVKCSDTWDAASKGCTPSRANLNCWDNPKTSSVSQSDDWFKADERTEAK 671
              +  G+F N+Q    D+W +        R ++   DN  + S S S       +  E  
Sbjct: 1619 -SEKAGEFENVQ----DSWGSG------KRKDVTRVDNSVSGSWSGSRGDQTNTKSNEWS 1667

Query: 672  IGGSCGAILSSQGVGSATENWNKS 743
              G   +++ + G  +A ++W  S
Sbjct: 1668 GWGRNKSVIPASGTENAQDSWGSS 1691