BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00043440
         (410 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009381122.1| PREDICTED: putative pentatricopeptide repeat...    66   8e-10
ref|XP_010914728.1| PREDICTED: putative pentatricopeptide repeat...    64   3e-09
ref|XP_008797243.1| PREDICTED: putative pentatricopeptide repeat...    59   2e-07

>ref|XP_009381122.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial [Musa acuminata subsp.
           malaccensis]
 ref|XP_018678012.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial [Musa acuminata subsp.
           malaccensis]
          Length = 731

 Score = 65.9 bits (159), Expect = 8e-10
 Identities = 49/127 (38%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
 Frame = +2

Query: 47  MRGIPLLHRRTSSFNELL------LFQRHFTNYPSVDDGPGFQRSPLRRFARGQPSPTPA 208
           MR  P  + R+S  N+ L      L  R+ T     +DG   QR+  R    GQ    P+
Sbjct: 1   MRRFPPPNLRSSLSNKFLSPAQTLLKARNPTGSTPSNDGCQSQRNAPRYRLSGQSQIAPS 60

Query: 209 KSEPLDGIGRSGFAPASNSPLSSRIKQASEKPFALARISAILMQKDAFLLLGSEFQSNAH 388
           KS    G+ +S     +NS LS+ ++Q +E+    AR+SAIL QKD FLLL SEFQ  A 
Sbjct: 61  KSGSFHGVIQS----PTNSLLSTSVRQTAERTLDPARVSAILCQKDWFLLLNSEFQRYAP 116

Query: 389 CVSPRTI 409
           C S R +
Sbjct: 117 CASSRVV 123


>ref|XP_010914728.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial [Elaeis guineensis]
          Length = 734

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 48/129 (37%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
 Frame = +2

Query: 47  MRGIPLLHRRTSS------FNELLLFQRHFTNYPSVDDGPGFQR---SPLRRFARGQPSP 199
           MRG P  + R S        +ELLL +R+    PS  D  G      +PL R   G+P  
Sbjct: 1   MRGFPARNLRPSPSKKQPPVDELLLKRRN----PSKSDPVGSANHPSAPLCRAPSGKPRS 56

Query: 200 TPAKSEPLDGIGRSGFAPASNSPLSSRIKQASEKPFALARISAILMQKDAFLLLGSEFQS 379
           + +KS+P  G   S   PAS S  S  I+Q + K     R+SAIL +KD FL+L +EF+S
Sbjct: 57  SVSKSDPFHGFSGSKSLPASKSIFSIEIQQKTAKSLDPVRLSAILSRKDWFLMLNTEFKS 116

Query: 380 NAHCVSPRT 406
               ++PR+
Sbjct: 117 VVAYLNPRS 125


>ref|XP_008797243.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial [Phoenix dactylifera]
          Length = 623

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
 Frame = +2

Query: 47  MRGIPLLHRRTSSFNEL-----LLFQRHFTNYPSVDDGPGFQRSPLRRFARGQPSPTPAK 211
           MRG P  + R S   +      LL +R   + P +      Q +PLRR + G+P    +K
Sbjct: 1   MRGFPPPNLRPSPSKKQPPVDELLLKRRKPSRPDLVGSANPQSAPLRRASSGKPRSPASK 60

Query: 212 SEPLDGIGRSGFAPASNSPLSSRIKQASEKPFALARISAILMQKDAFLLLGSEFQSNAHC 391
           S+ L G   S   PAS S LS+ I + + K     R S IL +KD F +L +EF+S    
Sbjct: 61  SDFLHGFDGSKSWPASKSRLSAEIHKKTAKSLDPVRFSEILSRKDWFSMLNTEFKSVVAY 120

Query: 392 VSPRT 406
           + PR+
Sbjct: 121 LYPRS 125