BLASTX nr result

ID: Cheilocostus21_contig00043418 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00043418
         (712 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGW45949.1| NADH-plastoquinone oxidoreductase subunit 1 (plas...    55   5e-06

>gb|AGW45949.1| NADH-plastoquinone oxidoreductase subunit 1 (plastid) [Lens
           culinaris]
          Length = 151

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
 Frame = -1

Query: 271 QLNK-YSIMGDQI*MTWIL*AS*FNSIYT*ASQFSTPRMRMDQLLNLGWKFLLPISLGN 98
           ++NK Y + G  I +   L  S F    +  +++S PR+RMDQLLNLGWKFLLP+SLGN
Sbjct: 81  EINKAYGVFGTTIDLFITLAKSYFFLFVSIITRWSLPRLRMDQLLNLGWKFLLPLSLGN 139


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