BLASTX nr result

ID: Cheilocostus21_contig00043259 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00043259
         (554 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009394939.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   100   3e-21
ref|XP_009394938.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   100   3e-21
ref|XP_009391112.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    92   4e-18

>ref|XP_009394939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23 isoform X2 [Musa
            acuminata subsp. malaccensis]
          Length = 940

 Score =  100 bits (249), Expect = 3e-21
 Identities = 78/221 (35%), Positives = 108/221 (48%), Gaps = 37/221 (16%)
 Frame = -2

Query: 553  VMDTSAHIPLPQAISTLQNCNTAR-NEIPELQTNSQVIGRESFILQEDRDLLPKGSHQTT 377
            V DT +  PLPQAI TLQ   T    E+PE+Q + + IGRE+  LQ D D LP+G  QTT
Sbjct: 467  VKDTLSLHPLPQAILTLQKSKTPTLYEVPEVQIDREAIGRETSTLQPDGDSLPEGLQQTT 526

Query: 376  SSLALSQ-----------------------GSMNSLVENGKYYGKSS------------N 302
            S+    Q                       GS  S  E  +  G ++            N
Sbjct: 527  STSVTLQVMRKDFMVEEAKATCRIDATFILGSHQSDDERCQISGSTNGEVKSVGVIAVLN 586

Query: 301  DTACDVLKSKRLEQKLRCESDIAKNCDAGM-TAQKNDELCKTVKCIPEDDRKVTLSNQSN 125
            +++C   KS++ E KL  E  +AK+ DA     Q +D LC  V  IPE++RK+ L     
Sbjct: 587  NSSCTRPKSQKHENKLLKERHMAKDNDAEKGILQTHDMLCNAVNGIPEENRKIKL----- 641

Query: 124  QANGFIRKAENGKAPLGIATTNQSMRCSSNLQSPENSLRNE 2
              NGF RK  NG+AP+G  TT+ +  CSS++ S   +L  +
Sbjct: 642  -LNGFTRKEANGRAPVGNLTTHHNEWCSSSMLSHVENLHKQ 681


>ref|XP_009394938.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23 isoform X1 [Musa
            acuminata subsp. malaccensis]
          Length = 966

 Score =  100 bits (249), Expect = 3e-21
 Identities = 78/221 (35%), Positives = 108/221 (48%), Gaps = 37/221 (16%)
 Frame = -2

Query: 553  VMDTSAHIPLPQAISTLQNCNTAR-NEIPELQTNSQVIGRESFILQEDRDLLPKGSHQTT 377
            V DT +  PLPQAI TLQ   T    E+PE+Q + + IGRE+  LQ D D LP+G  QTT
Sbjct: 467  VKDTLSLHPLPQAILTLQKSKTPTLYEVPEVQIDREAIGRETSTLQPDGDSLPEGLQQTT 526

Query: 376  SSLALSQ-----------------------GSMNSLVENGKYYGKSS------------N 302
            S+    Q                       GS  S  E  +  G ++            N
Sbjct: 527  STSVTLQVMRKDFMVEEAKATCRIDATFILGSHQSDDERCQISGSTNGEVKSVGVIAVLN 586

Query: 301  DTACDVLKSKRLEQKLRCESDIAKNCDAGM-TAQKNDELCKTVKCIPEDDRKVTLSNQSN 125
            +++C   KS++ E KL  E  +AK+ DA     Q +D LC  V  IPE++RK+ L     
Sbjct: 587  NSSCTRPKSQKHENKLLKERHMAKDNDAEKGILQTHDMLCNAVNGIPEENRKIKL----- 641

Query: 124  QANGFIRKAENGKAPLGIATTNQSMRCSSNLQSPENSLRNE 2
              NGF RK  NG+AP+G  TT+ +  CSS++ S   +L  +
Sbjct: 642  -LNGFTRKEANGRAPVGNLTTHHNEWCSSSMLSHVENLHKQ 681


>ref|XP_009391112.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Musa
            acuminata subsp. malaccensis]
          Length = 942

 Score = 91.7 bits (226), Expect = 4e-18
 Identities = 68/190 (35%), Positives = 102/190 (53%), Gaps = 9/190 (4%)
 Frame = -2

Query: 553  VMDTSAHIPLPQAISTLQ-NCNTARNEIPELQTNSQVIGRESFILQ-------EDRDLLP 398
            ++D S+  PL QA STL+ N N A +E+PEL  N+Q + ++S +++       E+     
Sbjct: 472  LVDASSPNPLHQAASTLRKNDNNALSEVPELHNNTQEVNKDSVVVKAISKASCENDSPFI 531

Query: 397  KGSHQTTSSLALSQGSMNSLVENGKYYGKSSNDTACDVLKSKRLEQKLRCESDIAKNCDA 218
              S ++ S      G  N +V++G    +  N  + D  +S++ E KL  E D AK+ DA
Sbjct: 532  SQSGRSDSEKCHRSGGSNGVVKSGVLVAQPKNSGSPDP-ESQKNEIKLIKERDTAKSGDA 590

Query: 217  GMTA-QKNDELCKTVKCIPEDDRKVTLSNQSNQANGFIRKAENGKAPLGIATTNQSMRCS 41
                 +KND LCK V  I E++ K  L +QS+  NGFIRK  N       ATT  + RCS
Sbjct: 591  ANAILKKNDVLCKKVSYIHEENGKTRLLSQSSHTNGFIRKEAN-------ATTCHNERCS 643

Query: 40   SNLQSPENSL 11
             NLQS + ++
Sbjct: 644  LNLQSCKENI 653


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