BLASTX nr result
ID: Cheilocostus21_contig00043031
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00043031
(566 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_009383719.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 96 2e-19
ref|XP_008777792.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 74 8e-12
ref|XP_010932029.2| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 71 5e-11
ref|XP_020099828.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 71 5e-11
ref|XP_020099827.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 71 5e-11
ref|XP_020099826.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 71 5e-11
ref|XP_008798630.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 70 1e-10
gb|OAY71442.1| DEAD-box ATP-dependent RNA helicase 3, chloroplas... 69 2e-10
ref|XP_009381394.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 69 3e-10
ref|XP_009381386.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 69 3e-10
ref|XP_020583408.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 62 8e-08
ref|XP_020672191.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 61 2e-07
ref|XP_021622618.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 59 9e-07
ref|XP_021622617.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 59 9e-07
ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 56 7e-06
emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera] 56 8e-06
>ref|XP_009383719.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like [Musa acuminata subsp. malaccensis]
Length = 776
Score = 95.5 bits (236), Expect = 2e-19
Identities = 66/147 (44%), Positives = 80/147 (54%), Gaps = 26/147 (17%)
Frame = -2
Query: 364 AMVIATISTIGVSSLYRTPSLDLAARKP----TDKAHSCGSLVLLHVSTSAAKGLGASCC 197
A T +TIGVSSLYRTPSLDL+AR+ +DK HSC L+ + + A K G+ C
Sbjct: 2 AATSTTTATIGVSSLYRTPSLDLSARRVFPCLSDKPHSCSGLLKVSAA-DATKRFGSLCL 60
Query: 196 CAVQLGSRLPRALPLFVPSAVASPNPVLSEEVFEEFRGFPISSLA--------------- 62
A + GSR P+FV SAVASPN VLSEE F+ FRG SSL
Sbjct: 61 GADRRGSRA--RCPMFVTSAVASPNSVLSEEAFQGFRGLSKSSLEEGEEEGYDADTYESE 118
Query: 61 -------GIVTGGDEDELAIASLGLPE 2
G DE+E+AIASL LP+
Sbjct: 119 EEEEGPFSATAGHDENEVAIASLDLPQ 145
>ref|XP_008777792.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like [Phoenix dactylifera]
Length = 759
Score = 73.6 bits (179), Expect = 8e-12
Identities = 59/139 (42%), Positives = 74/139 (53%), Gaps = 25/139 (17%)
Frame = -2
Query: 343 STIGVSSLYRTPSLDLAAR-----KPTDK-AHSCGSLVLLHVSTSAAKGLGASCCCAVQL 182
S +GVSSLYR+P L+L R P+ K +H CG +++ A+G CCC++Q
Sbjct: 3 SIVGVSSLYRSPCLELPKRALSYLSPSSKNSHLCGRR-----ASATARG----CCCSLQ- 52
Query: 181 GSRLPRALP-LFVPSAVASPNPVLSEEVFEEFRGFPISSLAGI----------------- 56
SR A P L VP AVASPN VLSEE F+ F SSL G
Sbjct: 53 SSRPTEAPPRLLVPLAVASPNSVLSEEAFKGLGDFSKSSLDGEEGEEEYYGSEEEEEEAE 112
Query: 55 -VTGGDEDELAIASLGLPE 2
T G ++ELAIA+LGLPE
Sbjct: 113 GSTVGSKEELAIANLGLPE 131
>ref|XP_010932029.2| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
3, chloroplastic [Elaeis guineensis]
Length = 762
Score = 71.2 bits (173), Expect = 5e-11
Identities = 57/142 (40%), Positives = 68/142 (47%), Gaps = 28/142 (19%)
Frame = -2
Query: 343 STIGVSSLYRTPSLDLAARK-------PTDKAHSCGSLVLLHVSTSAAKGLGASCCCAVQ 185
S +GVSSLYR+P L+L R ++K CG A CCC+++
Sbjct: 3 SIVGVSSLYRSPCLELPKRXRSHTYPPSSEKPPFCGL---------RASATTRGCCCSLR 53
Query: 184 LGSRLPRALP--LFVPSAVASPNPVLSEEVFEEFRGFPISSLAGI--------------- 56
S P A P L VPSAVASPN VLSEE F+ F SSL G
Sbjct: 54 --SSRPTAAPPRLLVPSAVASPNSVLSEEAFKGLGDFSKSSLDGEEGEEEYYGSEEEEEE 111
Query: 55 ----VTGGDEDELAIASLGLPE 2
T G E+ELAIA+LGLPE
Sbjct: 112 DAEGSTVGSEEELAIANLGLPE 133
>ref|XP_020099828.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X3
[Ananas comosus]
Length = 767
Score = 71.2 bits (173), Expect = 5e-11
Identities = 58/143 (40%), Positives = 67/143 (46%), Gaps = 30/143 (20%)
Frame = -2
Query: 343 STIGVSSLYRTPSLDLAAR---------KPTDKAHSCGSLVLLHVSTSAAKGLGASCCCA 191
S IGVSSLY +PS DL+ R +K H CG + S KG GA C CA
Sbjct: 3 SIIGVSSLYPSPSPDLSRRVFPFPSPSPSTPEKPHFCG------LRASTTKGFGA-CFCA 55
Query: 190 VQLGSRLPRALPLFVPSAVASPNPVLSEEVFEEFRGFPISSLAGIVT----GGDE----- 38
+ + L PSAVASPN VLSEE F GF SSL G GG+E
Sbjct: 56 LGRSRPAKQLSLLIPPSAVASPNSVLSEEAFRGLGGFSSSSLVGDEEEEEGGGEEYGSEA 115
Query: 37 ------------DELAIASLGLP 5
+ELAIA+LGLP
Sbjct: 116 DESEGESYDGSDEELAIANLGLP 138
>ref|XP_020099827.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X2
[Ananas comosus]
Length = 767
Score = 71.2 bits (173), Expect = 5e-11
Identities = 58/143 (40%), Positives = 67/143 (46%), Gaps = 30/143 (20%)
Frame = -2
Query: 343 STIGVSSLYRTPSLDLAAR---------KPTDKAHSCGSLVLLHVSTSAAKGLGASCCCA 191
S IGVSSLY +PS DL+ R +K H CG + S KG GA C CA
Sbjct: 3 SIIGVSSLYPSPSPDLSRRVFPFPSPSPSTPEKPHFCG------LRASTTKGFGA-CFCA 55
Query: 190 VQLGSRLPRALPLFVPSAVASPNPVLSEEVFEEFRGFPISSLAGIVT----GGDE----- 38
+ + L PSAVASPN VLSEE F GF SSL G GG+E
Sbjct: 56 LGRSRPAKQLSLLIPPSAVASPNSVLSEEAFRGLGGFSSSSLVGDEEEEEGGGEEYGSEA 115
Query: 37 ------------DELAIASLGLP 5
+ELAIA+LGLP
Sbjct: 116 DESEGESYDGSDEELAIANLGLP 138
>ref|XP_020099826.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X1
[Ananas comosus]
Length = 768
Score = 71.2 bits (173), Expect = 5e-11
Identities = 58/143 (40%), Positives = 67/143 (46%), Gaps = 30/143 (20%)
Frame = -2
Query: 343 STIGVSSLYRTPSLDLAAR---------KPTDKAHSCGSLVLLHVSTSAAKGLGASCCCA 191
S IGVSSLY +PS DL+ R +K H CG + S KG GA C CA
Sbjct: 3 SIIGVSSLYPSPSPDLSRRVFPFPSPSPSTPEKPHFCG------LRASTTKGFGA-CFCA 55
Query: 190 VQLGSRLPRALPLFVPSAVASPNPVLSEEVFEEFRGFPISSLAGIVT----GGDE----- 38
+ + L PSAVASPN VLSEE F GF SSL G GG+E
Sbjct: 56 LGRSRPAKQLSLLIPPSAVASPNSVLSEEAFRGLGGFSSSSLVGDEEEEEGGGEEYGSEA 115
Query: 37 ------------DELAIASLGLP 5
+ELAIA+LGLP
Sbjct: 116 DESEGESYDGSDEELAIANLGLP 138
>ref|XP_008798630.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
[Phoenix dactylifera]
Length = 762
Score = 70.1 bits (170), Expect = 1e-10
Identities = 55/134 (41%), Positives = 70/134 (52%), Gaps = 20/134 (14%)
Frame = -2
Query: 343 STIGVSSLYRTPSLDLAARKPT-DKAHSCGSLVLLHVSTSAAKGLGASCCCAVQLGSRLP 167
S IGVSSLYR+ L P+ +K H CG L +T+ +G CCC+++ S P
Sbjct: 3 SIIGVSSLYRSSKRPLPFMFPSSEKPHFCG---LRASATATPRG----CCCSLR--SSRP 53
Query: 166 RALP--LFVPSAVASPNPVLSEEVF-----------------EEFRGFPISSLAGIVTGG 44
P LFVPSAVASPN VLSE+ EE+ G + G GG
Sbjct: 54 AVAPPHLFVPSAVASPNSVLSEDALKGLGDLSKIPLEGEEDEEEYYGSDKEAAEGPAVGG 113
Query: 43 DEDELAIASLGLPE 2
+ED LA+A+LGLPE
Sbjct: 114 EED-LAVANLGLPE 126
>gb|OAY71442.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Ananas
comosus]
Length = 799
Score = 69.3 bits (168), Expect = 2e-10
Identities = 59/147 (40%), Positives = 69/147 (46%), Gaps = 34/147 (23%)
Frame = -2
Query: 343 STIGVSSLYRTPSLDLAAR-----------KPT--DKAHSCGSLVLLHVSTSAAKGLGAS 203
S IGVSSLY +PS DL+ R P+ +K H CG + S KG GA
Sbjct: 3 SIIGVSSLYPSPSPDLSRRVFPFPSPFPSPSPSIREKPHFCG------LRASTTKGFGA- 55
Query: 202 CCCAVQLGSRLPRALPLFVPSAVASPNPVLSEEVFEEFRGFPISSLAGIVT----GGDE- 38
C CA+ + L PSAVASPN VLSEE F GF SSL G GG+E
Sbjct: 56 CFCALGRSRPAKQLSLLIPPSAVASPNSVLSEEAFRGLGGFSSSSLVGDEEEEEGGGEEY 115
Query: 37 ----------------DELAIASLGLP 5
+ELAIA+LGLP
Sbjct: 116 GSEADESEGESYDGSDEELAIANLGLP 142
>ref|XP_009381394.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like isoform X2 [Musa acuminata subsp.
malaccensis]
Length = 754
Score = 68.9 bits (167), Expect = 3e-10
Identities = 57/146 (39%), Positives = 67/146 (45%), Gaps = 26/146 (17%)
Frame = -2
Query: 361 MVIATISTIGVSSLYRTPSLDLAARKPT----DKAHSCGSLVLLHVSTSAAKGLGASCCC 194
M A +TIGVSSL RTPSLD++ R+ DK S SL+ K GA
Sbjct: 1 MAAAATTTIGVSSLVRTPSLDISTRRVLLYGFDKPRSSSSLL---------KVCGA---- 47
Query: 193 AVQLGSRLPRALPLFVPSAVASPNPVLSEEVFEEFRGFPISSL----------------- 65
A LFVPSAVASPN VLSEE F+ FRG S L
Sbjct: 48 ----------ARRLFVPSAVASPNSVLSEEAFKGFRGLSKSPLEQGEEEEYGSDAYNSEE 97
Query: 64 -----AGIVTGGDEDELAIASLGLPE 2
+ G D+DELAI +L LP+
Sbjct: 98 EEEGSSSAAAGQDKDELAITNLDLPQ 123
>ref|XP_009381386.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like isoform X1 [Musa acuminata subsp.
malaccensis]
Length = 769
Score = 68.9 bits (167), Expect = 3e-10
Identities = 57/146 (39%), Positives = 67/146 (45%), Gaps = 26/146 (17%)
Frame = -2
Query: 361 MVIATISTIGVSSLYRTPSLDLAARKPT----DKAHSCGSLVLLHVSTSAAKGLGASCCC 194
M A +TIGVSSL RTPSLD++ R+ DK S SL+ K GA
Sbjct: 1 MAAAATTTIGVSSLVRTPSLDISTRRVLLYGFDKPRSSSSLL---------KVCGA---- 47
Query: 193 AVQLGSRLPRALPLFVPSAVASPNPVLSEEVFEEFRGFPISSL----------------- 65
A LFVPSAVASPN VLSEE F+ FRG S L
Sbjct: 48 ----------ARRLFVPSAVASPNSVLSEEAFKGFRGLSKSPLEQGEEEEYGSDAYNSEE 97
Query: 64 -----AGIVTGGDEDELAIASLGLPE 2
+ G D+DELAI +L LP+
Sbjct: 98 EEEGSSSAAAGQDKDELAITNLDLPQ 123
>ref|XP_020583408.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Phalaenopsis
equestris]
Length = 772
Score = 62.0 bits (149), Expect = 8e-08
Identities = 53/138 (38%), Positives = 67/138 (48%), Gaps = 24/138 (17%)
Frame = -2
Query: 343 STIGVSSLYRTPS----LDLAARK---------PTDKAHSCGSLVLLHVSTSAAKGLGAS 203
S + VSSL++ S LDL R P +K H C LL S+S A +
Sbjct: 3 SNVCVSSLFQNFSSASFLDLHRRVSVFPSLPPFPFEKNHVC----LLRASSSPAPRAFDA 58
Query: 202 CCCAVQLGSRLPRALPLFVPSAVASPNPVLSEEVFEEFRGFPISS-----------LAGI 56
C C + R R L L VPSA+ASPN VLSEE F+ GF SS
Sbjct: 59 CYCLL----RSSRGLRLVVPSAIASPNSVLSEEAFKGLGGFKGSSSLDEDEDEEYQFGED 114
Query: 55 VTGGDEDELAIASLGLPE 2
++ GD+DEL ++ LGLPE
Sbjct: 115 MSEGDKDELDVSKLGLPE 132
>ref|XP_020672191.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Dendrobium
catenatum]
ref|XP_020672192.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Dendrobium
catenatum]
gb|PKU77785.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Dendrobium
catenatum]
Length = 772
Score = 60.8 bits (146), Expect = 2e-07
Identities = 52/134 (38%), Positives = 66/134 (49%), Gaps = 24/134 (17%)
Frame = -2
Query: 331 VSSLYRT----PSLDLAAR----------KPTDKAHSCGSLVLLHVSTS-AAKGLGASCC 197
VSSL+++ PSLDL R P +K H C LL S+S A+G+ C
Sbjct: 7 VSSLFQSFSSVPSLDLTRRLVPVFPSLPSSPFEKNHVC----LLRASSSPTARGIDVCHC 62
Query: 196 CAVQLGSRLPRALPLFVPSAVASPNPVLSEEVFEEFRGFPISS---------LAGIVTGG 44
+R R PLF+ A+ASPN VLSEE F+ GF SS T G
Sbjct: 63 L-----TRSSRGHPLFLRFAIASPNSVLSEEAFKGLGGFKGSSSLDEDEEYQFGEENTEG 117
Query: 43 DEDELAIASLGLPE 2
D+DEL ++ LGLPE
Sbjct: 118 DKDELDVSRLGLPE 131
>ref|XP_021622618.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X2
[Manihot esculenta]
Length = 786
Score = 58.9 bits (141), Expect = 9e-07
Identities = 49/146 (33%), Positives = 67/146 (45%), Gaps = 32/146 (21%)
Frame = -2
Query: 343 STIGVSSLYRTPSLDLAARKP-------TDKAHSCGSLVLLHVSTSAAKGLGASCCCAVQ 185
S IGVSS++ TPS++L+ R+P + + S S H ++ A G G
Sbjct: 6 SVIGVSSIFHTPSIELSTRRPNSATPTLSSSSFSLPSSEKTHFNSLVASGGGGGGGG--- 62
Query: 184 LGSRLPRALPL---------FVPSAVASPNPVLSEEVFEEFRG----------------F 80
G R P L FVPSA+A+PN +LSEE F+ G
Sbjct: 63 -GGRPPLVLQSSAHYKHGLSFVPSAIATPNSILSEEAFKGLSGGLSDFDDDDDVESRDYE 121
Query: 79 PISSLAGIVTGGDEDELAIASLGLPE 2
+ AG + DEDELAI+ LGLP+
Sbjct: 122 SENETAGGESLSDEDELAISKLGLPQ 147
>ref|XP_021622617.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X1
[Manihot esculenta]
gb|OAY42476.1| hypothetical protein MANES_09G182900 [Manihot esculenta]
Length = 787
Score = 58.9 bits (141), Expect = 9e-07
Identities = 49/146 (33%), Positives = 67/146 (45%), Gaps = 32/146 (21%)
Frame = -2
Query: 343 STIGVSSLYRTPSLDLAARKP-------TDKAHSCGSLVLLHVSTSAAKGLGASCCCAVQ 185
S IGVSS++ TPS++L+ R+P + + S S H ++ A G G
Sbjct: 6 SVIGVSSIFHTPSIELSTRRPNSATPTLSSSSFSLPSSEKTHFNSLVASGGGGGGGG--- 62
Query: 184 LGSRLPRALPL---------FVPSAVASPNPVLSEEVFEEFRG----------------F 80
G R P L FVPSA+A+PN +LSEE F+ G
Sbjct: 63 -GGRPPLVLQSSAHYKHGLSFVPSAIATPNSILSEEAFKGLSGGLSDFDDDDDVESRDYE 121
Query: 79 PISSLAGIVTGGDEDELAIASLGLPE 2
+ AG + DEDELAI+ LGLP+
Sbjct: 122 SENETAGGESLSDEDELAISKLGLPQ 147
>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
[Vitis vinifera]
emb|CBI39694.3| unnamed protein product, partial [Vitis vinifera]
Length = 764
Score = 56.2 bits (134), Expect = 7e-06
Identities = 49/128 (38%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
Frame = -2
Query: 343 STIGVSSLYRTPSLDLAARKPTDKAHSCGSLVLLHVSTSAAKGLGASCCCAVQLGSRLPR 164
S IGVSS+Y+T +L+L+ R AHS L S G+ + V + L R
Sbjct: 4 SIIGVSSVYQTTALELSRRT---SAHSLS----LPFSDKTHLGVFKAPNTRVLSDASLRR 56
Query: 163 ALPL---FVPSAVASPNPVLSEEVFEEFRGFPISSLAGIVTGGD------------EDEL 29
+ FVPSA+A+PN VLSEE F+ GF L T D EDEL
Sbjct: 57 SFKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQEDEL 116
Query: 28 AIASLGLP 5
A+A LGLP
Sbjct: 117 ALAQLGLP 124
>emb|CAN77581.1| hypothetical protein VITISV_015347 [Vitis vinifera]
Length = 786
Score = 56.2 bits (134), Expect = 8e-06
Identities = 49/128 (38%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
Frame = -2
Query: 343 STIGVSSLYRTPSLDLAARKPTDKAHSCGSLVLLHVSTSAAKGLGASCCCAVQLGSRLPR 164
S IGVSS+Y+T +L+L+ R AHS L S G+ + V + L R
Sbjct: 4 SIIGVSSVYQTTALELSRRT---SAHSLS----LPFSDKTHLGVFKAPNTRVLSDASLRR 56
Query: 163 ALPL---FVPSAVASPNPVLSEEVFEEFRGFPISSLAGIVTGGD------------EDEL 29
+ FVPSA+A+PN VLSEE F+ GF L T D EDEL
Sbjct: 57 SFKQGISFVPSAIATPNSVLSEEAFKGLGGFSKDPLDVTDTDDDYDPEIEASAAAQEDEL 116
Query: 28 AIASLGLP 5
A+A LGLP
Sbjct: 117 ALAQLGLP 124