BLASTX nr result

ID: Cheilocostus21_contig00042786 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00042786
         (505 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018680780.1| PREDICTED: protein MULTIPLE CHLOROPLAST DIVI...    36   2e-07
ref|XP_009397590.1| PREDICTED: protein MULTIPLE CHLOROPLAST DIVI...    36   2e-07

>ref|XP_018680780.1| PREDICTED: protein MULTIPLE CHLOROPLAST DIVISION SITE 1 isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 343

 Score = 36.2 bits (82), Expect(3) = 2e-07
 Identities = 20/45 (44%), Positives = 25/45 (55%)
 Frame = +3

Query: 222 DDKPWNLAKWQRIKFDYRRKRLDRGKSSWILTIRASGEALDSGGH 356
           DDK WN A     +FD  R + +  +S W   IRAS  ALDS G+
Sbjct: 24  DDKGWNSANLCWFRFDSSRPKWNCRRSRWFFAIRAS--ALDSAGN 66



 Score = 34.3 bits (77), Expect(3) = 2e-07
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = +1

Query: 358 GPNILLYRKGLDYEKRISSLGPIFDALPPPMLFRK 462
           GP++ +  KGLD+E+RI+S   + +ALPP  L  K
Sbjct: 68  GPSVPVDGKGLDWERRINSFREMVNALPPATLVFK 102



 Score = 31.2 bits (69), Expect(3) = 2e-07
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +2

Query: 56  MTSIASHISFLPFQFIYWQVH 118
           MTSIA+ I FLPFQ IY Q H
Sbjct: 1   MTSIANSIYFLPFQSIYLQNH 21


>ref|XP_009397590.1| PREDICTED: protein MULTIPLE CHLOROPLAST DIVISION SITE 1 isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 342

 Score = 36.2 bits (82), Expect(3) = 2e-07
 Identities = 20/45 (44%), Positives = 25/45 (55%)
 Frame = +3

Query: 222 DDKPWNLAKWQRIKFDYRRKRLDRGKSSWILTIRASGEALDSGGH 356
           DDK WN A     +FD  R + +  +S W   IRAS  ALDS G+
Sbjct: 24  DDKGWNSANLCWFRFDSSRPKWNCRRSRWFFAIRAS--ALDSAGN 66



 Score = 34.3 bits (77), Expect(3) = 2e-07
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = +1

Query: 358 GPNILLYRKGLDYEKRISSLGPIFDALPPPMLFRK 462
           GP++ +  KGLD+E+RI+S   + +ALPP  L  K
Sbjct: 68  GPSVPVDGKGLDWERRINSFREMVNALPPATLVFK 102



 Score = 31.2 bits (69), Expect(3) = 2e-07
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +2

Query: 56  MTSIASHISFLPFQFIYWQVH 118
           MTSIA+ I FLPFQ IY Q H
Sbjct: 1   MTSIANSIYFLPFQSIYLQNH 21


Top