BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00042717
         (520 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY75091.1| Pentatricopeptide repeat-containing protein, chlo...    65   7e-25
ref|XP_020107177.1| pentatricopeptide repeat-containing protein ...    65   4e-24
gb|KQK98530.1| hypothetical protein SETIT_011969mg [Setaria ital...    69   3e-17
ref|XP_018679361.1| PREDICTED: pentatricopeptide repeat-containi...    77   3e-13
gb|OEL15902.1| putative pentatricopeptide repeat-containing prot...    75   1e-12
gb|OEL26389.1| putative pentatricopeptide repeat-containing prot...    73   7e-12
ref|XP_020164275.1| pentatricopeptide repeat-containing protein ...    73   9e-12
gb|ONK57645.1| uncharacterized protein A4U43_C09F2620 [Asparagus...    71   1e-11
ref|XP_020246318.1| pentatricopeptide repeat-containing protein ...    71   3e-11
ref|XP_010930843.1| PREDICTED: pentatricopeptide repeat-containi...    71   4e-11
gb|ONM25996.1| small kernel1 [Zea mays]                                70   7e-11
ref|XP_020404227.1| pentatricopeptide repeat-containing protein ...    70   8e-11
gb|PAN39673.1| hypothetical protein PAHAL_G01997 [Panicum hallii]      70   8e-11
ref|XP_006663297.2| PREDICTED: pentatricopeptide repeat-containi...    69   2e-10
ref|XP_015616471.1| PREDICTED: pentatricopeptide repeat-containi...    69   2e-10
gb|ACM17537.1| putative pentatricopeptide [Oryza australiensis]        69   2e-10
gb|EAY80351.1| hypothetical protein OsI_35522 [Oryza sativa Indi...    69   2e-10
ref|XP_010237844.2| PREDICTED: pentatricopeptide repeat-containi...    69   3e-10
gb|OQU79144.1| hypothetical protein SORBI_3008G100400 [Sorghum b...    66   2e-09
ref|XP_002443200.1| pentatricopeptide repeat-containing protein ...    66   2e-09

>gb|OAY75091.1| Pentatricopeptide repeat-containing protein, chloroplastic [Ananas
           comosus]
          Length = 446

 Score = 65.5 bits (158), Expect(3) = 7e-25
 Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = -3

Query: 218 WEVLLAACVVHRNVKVGEIAAFRLFELEES--INYVALCGLCETVGRLGCAATLRARGER 45
           W  LL AC VH+NV+VGEIAA RLF+LE+    NYVALCG+ E VG     A +R+R   
Sbjct: 378 WGALLGACAVHKNVEVGEIAAQRLFKLEKGNPSNYVALCGIYEAVGDSEGVAEVRSRMRE 437

Query: 44  IGYDED 27
           +   ED
Sbjct: 438 LANGED 443



 Score = 50.8 bits (120), Expect(3) = 7e-25
 Identities = 33/76 (43%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLERAKGMKS-----NCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W T+IS YG  G   +SL   K M S     N  TFT + SSC  S ++ EG RIFES+ 
Sbjct: 275 WSTMISCYGAHGKGEESLRLYKEMISEGVVPNGVTFTSVLSSCSHSGLIEEGRRIFESIS 334

Query: 355 RDHGIEPMPHRAALCM 308
           R H   P   + A CM
Sbjct: 335 RIHDAVPSIEQYA-CM 349



 Score = 45.4 bits (106), Expect(3) = 7e-25
 Identities = 18/41 (43%), Positives = 31/41 (75%)
 Frame = -2

Query: 330 PIVQHYACLVDLIGHLGNIEQALEIIYGMP*ELTASILGSI 208
           P ++ YAC+VDL+G  G+I++AL++I  MP E + S+ G++
Sbjct: 341 PSIEQYACMVDLLGRCGSIKEALQLISSMPMEPSGSVWGAL 381


>ref|XP_020107177.1| pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Ananas comosus]
          Length = 490

 Score = 64.7 bits (156), Expect(3) = 4e-24
 Identities = 34/62 (54%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
 Frame = -3

Query: 218 WEVLLAACVVHRNVKVGEIAAFRLFELEES--INYVALCGLCETVGRLGCAATLRARGER 45
           W  LL AC VH+NV+VGEIAA RLF+LE+    NYVALCG+ E VG     A +R+R   
Sbjct: 378 WGALLGACAVHKNVEVGEIAAQRLFKLEKGNPSNYVALCGIYEAVGDSEGVAEVRSRMRE 437

Query: 44  IG 39
           +G
Sbjct: 438 LG 439



 Score = 50.8 bits (120), Expect(3) = 4e-24
 Identities = 33/76 (43%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLERAKGMKS-----NCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W T+IS YG  G   +SL   K M S     N  TFT + SSC  S ++ EG RIFES+ 
Sbjct: 275 WSTMISCYGAHGKGEESLRLYKEMISEGVVPNGVTFTSVLSSCSHSGLIEEGRRIFESIS 334

Query: 355 RDHGIEPMPHRAALCM 308
           R H   P   + A CM
Sbjct: 335 RIHDAVPSIEQYA-CM 349



 Score = 43.5 bits (101), Expect(3) = 4e-24
 Identities = 17/41 (41%), Positives = 30/41 (73%)
 Frame = -2

Query: 330 PIVQHYACLVDLIGHLGNIEQALEIIYGMP*ELTASILGSI 208
           P ++ YAC+VDL+G  G+I++AL++I  MP E +  + G++
Sbjct: 341 PSIEQYACMVDLLGRCGSIKEALQLISSMPMEPSGCVWGAL 381


>gb|KQK98530.1| hypothetical protein SETIT_011969mg [Setaria italica]
          Length = 420

 Score = 69.3 bits (168), Expect(2) = 3e-17
 Identities = 35/62 (56%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
 Frame = -3

Query: 218 WEVLLAACVVHRNVKVGEIAAFRLFELEES--INYVALCGLCETVGRLGCAATLRARGER 45
           W  LL+AC +H NV VGEIAA+RLFELEE    NYV LCG+ ++VGR    A LR+R   
Sbjct: 303 WGALLSACAMHNNVDVGEIAAYRLFELEEGNVSNYVTLCGIYDSVGRSDRVAGLRSRMRE 362

Query: 44  IG 39
           +G
Sbjct: 363 LG 364



 Score = 46.6 bits (109), Expect(2) = 3e-17
 Identities = 21/41 (51%), Positives = 28/41 (68%)
 Frame = -2

Query: 330 PIVQHYACLVDLIGHLGNIEQALEIIYGMP*ELTASILGSI 208
           P   HYAC+VDL+G  G IE+A+E I  MP E  AS+ G++
Sbjct: 266 PTADHYACMVDLLGRAGTIEEAVEFIRKMPMEPGASLWGAL 306


>ref|XP_018679361.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Musa acuminata subsp. malaccensis]
 ref|XP_009393799.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Musa acuminata subsp. malaccensis]
 ref|XP_018679362.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Musa acuminata subsp. malaccensis]
 ref|XP_018679363.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Musa acuminata subsp. malaccensis]
 ref|XP_018679364.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Musa acuminata subsp. malaccensis]
          Length = 512

 Score = 77.0 bits (188), Expect = 3e-13
 Identities = 38/57 (66%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
 Frame = -3

Query: 218 WEVLLAACVVHRNVKVGEIAAFRLFELE--ESINYVALCGLCETVGRLGCAATLRAR 54
           W  LL ACVVH+NV+VGEIAAFRLF+LE     NYVALCG+ E VGRL C A +R R
Sbjct: 396 WGALLGACVVHKNVEVGEIAAFRLFDLEARNPSNYVALCGIYEAVGRLDCVAKVRVR 452



 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLER-----AKGMKSNCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W TLIS YG  G RN SL       A+GMK N  TFT + SSC  S +V EG RIF+S++
Sbjct: 293 WSTLISCYGVHGERNGSLALFEEMLAQGMKPNHITFTSVLSSCSHSGLVEEGRRIFDSIR 352

Query: 355 RDHGIEP-MPHRAALCMPSGSYWPFRE-------Y*TST*DNLWDAVRANC*YFGKYCWL 200
             H +EP + H A L    G      E              ++W A+   C         
Sbjct: 353 GIHEVEPSIEHYACLVDLIGRSGNVEEALEMIHRMPMEPTASVWGALLGACVVHKNV--- 409

Query: 199 LVWCIGMLRWERLLPLDYLSWRNLSTMWLSVAYVKQLVDWVVRLH*ELGVRELGMMKTSG 20
               +G +   RL  L+  +  N   +      V +L D V ++   + ++EL M+KT G
Sbjct: 410 ---EVGEIAAFRLFDLEARNPSNYVALCGIYEAVGRL-DCVAKV--RVRMKELEMVKTPG 463

Query: 19  CSWIDV 2
           CSWIDV
Sbjct: 464 CSWIDV 469


>gb|OEL15902.1| putative pentatricopeptide repeat-containing protein [Dichanthelium
           oligosanthes]
          Length = 350

 Score = 74.7 bits (182), Expect = 1e-12
 Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 16/189 (8%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLER-----AKGMKSNCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W TLIS YG  G   ++L       ++G+K NC TFT I SSC  S +V++G  IFE+M 
Sbjct: 130 WSTLISCYGVHGMGEEALRIYXEMVSRGVKPNCITFTSILSSCSHSGLVSDGRMIFEAMS 189

Query: 355 RDHGIEP-MPHRAALCMPSGSYWP-------FREY*TST*DNLWDAVRANC*YFGKYCWL 200
           + HG+EP   H A +    G            R+       NLW A+ + C         
Sbjct: 190 KVHGVEPTADHYACMVDLLGRAGAIEEAVEFIRKMPMEPGANLWGALLSACAMHKNV--- 246

Query: 199 LVWCIGMLRWERLLPLDYLSWRNLSTMWLSVAYVKQLVDW---VVRLH*ELGVRELGMMK 29
               +G +   RL  L+    ++ ++ ++++  +   V W   +  L   +  RELGM+K
Sbjct: 247 ---DVGEIAAYRLXELE----KDNASNYVTLCGIYDAVGWSDCIAGLRSRM--RELGMVK 297

Query: 28  TSGCSWIDV 2
           T GCSW+DV
Sbjct: 298 TPGCSWVDV 306


>gb|OEL26389.1| putative pentatricopeptide repeat-containing protein [Dichanthelium
           oligosanthes]
          Length = 501

 Score = 73.2 bits (178), Expect = 7e-12
 Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
 Frame = -3

Query: 218 WEVLLAACVVHRNVKVGEIAAFRLFELEE--SINYVALCGLCETVGRLGCAATLRARGER 45
           W  LL+AC +H+NV VGEIAA+RLFELE+  + NYV LCG+ + VGR  C A LR+R   
Sbjct: 379 WGALLSACAMHKNVDVGEIAAYRLFELEKDNASNYVTLCGIYDAVGRSDCVAGLRSRMRE 438

Query: 44  IG 39
           +G
Sbjct: 439 LG 440



 Score = 70.5 bits (171), Expect = 6e-11
 Identities = 60/186 (32%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLER-----AKGMKSNCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W TLIS YG  G   ++L       ++G+K NC TFT + SSC  S  V++G +IFE+M 
Sbjct: 276 WSTLISCYGVHGMGEEALRIYEEMVSRGVKPNCITFTSVLSSCSHSGRVSDGRKIFEAMS 335

Query: 355 RDHGIEP-MPHRAALCMPSGSYWP-------FREY*TST*DNLWDAVRANC*YFGKYCWL 200
           + HG+EP   H A +    G            R+       +LW A+ + C         
Sbjct: 336 KVHGVEPTADHYACMVDLLGRAGAIEEAVEFIRKMPMEPGASLWGALLSACAMHKNV--- 392

Query: 199 LVWCIGMLRWERLLPLDYLSWRNLSTMWLSVAYVKQLVDWVVRLH*ELGVRELGMMKTSG 20
               +G +   RL  L+  +  N  T+   +       D V  L   +  RELGM+KT G
Sbjct: 393 ---DVGEIAAYRLFELEKDNASNYVTL-CGIYDAVGRSDCVAGLRSRM--RELGMVKTPG 446

Query: 19  CSWIDV 2
           CSW+DV
Sbjct: 447 CSWVDV 452


>ref|XP_020164275.1| pentatricopeptide repeat-containing protein At3g12770-like
           [Aegilops tauschii subsp. tauschii]
 ref|XP_020164276.1| pentatricopeptide repeat-containing protein At3g12770-like
           [Aegilops tauschii subsp. tauschii]
 ref|XP_020164277.1| pentatricopeptide repeat-containing protein At3g12770-like
           [Aegilops tauschii subsp. tauschii]
          Length = 486

 Score = 72.8 bits (177), Expect = 9e-12
 Identities = 62/187 (33%), Positives = 85/187 (45%), Gaps = 14/187 (7%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLE-----RAKGMKSNCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W TLIS YG  G   Q+L       ++ +K NC TFT + SSC  S +V +G  IFESM+
Sbjct: 277 WSTLISCYGVHGKGKQALHVYEEMLSQSVKPNCITFTSVLSSCSHSGLVTDGRMIFESMR 336

Query: 355 RDHGIEPMPHRAALCMP---------SGSYWPFREY*TST*DNLWDAVRANC*YFGKYCW 203
           + HG+EP     A CM            +    ++         W A+ + C        
Sbjct: 337 KVHGVEPTSEHYA-CMVDLLGRAGAIEEAVGLIKKMPMEPCATAWGALLSACAMHNNV-- 393

Query: 202 LLVWCIGMLRWERLLPLDYLSWRNLSTMWLSVAYVKQLVDWVVRLH*ELGVRELGMMKTS 23
                +G +   RL  L+  +  N  T+      V Q  D V  L   L +RELGM+KT 
Sbjct: 394 ----DVGEIAAYRLFELEKGNVSNYITLCGIYGAVGQ-SDGVAGL--RLRMRELGMVKTP 446

Query: 22  GCSWIDV 2
           GCSW+DV
Sbjct: 447 GCSWVDV 453


>gb|ONK57645.1| uncharacterized protein A4U43_C09F2620 [Asparagus officinalis]
          Length = 251

 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
 Frame = -3

Query: 218 WEVLLAACVVHRNVKVGEIAAFRLFELE--ESINYVALCGLCETVGRLGCAATLRARGER 45
           W  LL AC +HRNV+VGE+AA+ LFELE   S NY+ALCG+ E+VG L   A +RAR   
Sbjct: 130 WGALLNACAMHRNVEVGEVAAYELFELEPRNSSNYIALCGIYESVGMLDKVAIMRARMHE 189

Query: 44  IG 39
           +G
Sbjct: 190 LG 191



 Score = 66.6 bits (161), Expect = 5e-10
 Identities = 57/184 (30%), Positives = 84/184 (45%), Gaps = 13/184 (7%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLER-----AKGMKSNCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W TLIS YG  G   ++L        +G+K N  TFT I SSC  S +VNEG  +F+SM 
Sbjct: 27  WSTLISCYGVHGKGKEALALYDKMIQRGLKPNSVTFTSILSSCSHSGLVNEGQALFDSMM 86

Query: 355 RDHGIEP-MPHRAALCMPSGSYWPFRE-------Y*TST*DNLWDAVRANC*YFGKYCWL 200
           RD+G+EP + H A +    G     +E              ++W A+   C     +  +
Sbjct: 87  RDYGLEPCVEHYACIVDLLGRAGRTKEALKLIKSMPMKPIASVWGALLNAC---AMHRNV 143

Query: 199 LVWCIGMLRWERLLPLDYLSWRNLSTMWLSVAYVKQLVDWVVRLH*ELGVRELGMMKTSG 20
            V  +       L P +  ++  L  ++ SV  + ++     R+H      ELGM K  G
Sbjct: 144 EVGEVAAYELFELEPRNSSNYIALCGIYESVGMLDKVAIMRARMH------ELGMTKAPG 197

Query: 19  CSWI 8
           CSWI
Sbjct: 198 CSWI 201


>ref|XP_020246318.1| pentatricopeptide repeat-containing protein At3g14330-like
           [Asparagus officinalis]
          Length = 384

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
 Frame = -3

Query: 218 WEVLLAACVVHRNVKVGEIAAFRLFELE--ESINYVALCGLCETVGRLGCAATLRARGER 45
           W  LL AC +HRNV+VGE+AA+ LFELE   S NY+ALCG+ E+VG L   A +RAR   
Sbjct: 263 WGALLNACAMHRNVEVGEVAAYELFELEPRNSSNYIALCGIYESVGMLDKVAIMRARMHE 322

Query: 44  IG 39
           +G
Sbjct: 323 LG 324



 Score = 66.6 bits (161), Expect = 1e-09
 Identities = 57/184 (30%), Positives = 84/184 (45%), Gaps = 13/184 (7%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLER-----AKGMKSNCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W TLIS YG  G   ++L        +G+K N  TFT I SSC  S +VNEG  +F+SM 
Sbjct: 160 WSTLISCYGVHGKGKEALALYDKMIQRGLKPNSVTFTSILSSCSHSGLVNEGQALFDSMM 219

Query: 355 RDHGIEP-MPHRAALCMPSGSYWPFRE-------Y*TST*DNLWDAVRANC*YFGKYCWL 200
           RD+G+EP + H A +    G     +E              ++W A+   C     +  +
Sbjct: 220 RDYGLEPCVEHYACIVDLLGRAGRTKEALKLIKSMPMKPIASVWGALLNAC---AMHRNV 276

Query: 199 LVWCIGMLRWERLLPLDYLSWRNLSTMWLSVAYVKQLVDWVVRLH*ELGVRELGMMKTSG 20
            V  +       L P +  ++  L  ++ SV  + ++     R+H      ELGM K  G
Sbjct: 277 EVGEVAAYELFELEPRNSSNYIALCGIYESVGMLDKVAIMRARMH------ELGMTKAPG 330

Query: 19  CSWI 8
           CSWI
Sbjct: 331 CSWI 334


>ref|XP_010930843.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Elaeis guineensis]
          Length = 499

 Score = 70.9 bits (172), Expect = 4e-11
 Identities = 36/62 (58%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
 Frame = -3

Query: 218 WEVLLAACVVHRNVKVGEIAAFRLFELE--ESINYVALCGLCETVGRLGCAATLRARGER 45
           W  LL ACVVHRNV+VGEIAA++LFELE     NYVALCG+ + VGR    A +R+R   
Sbjct: 387 WGALLGACVVHRNVEVGEIAAYKLFELEAGNPSNYVALCGIYDAVGRWDGVAQMRSRMRE 446

Query: 44  IG 39
            G
Sbjct: 447 FG 448



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 54/190 (28%), Positives = 81/190 (42%), Gaps = 17/190 (8%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLERAK-----GMKSNCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W TLIS YG  G   ++L   K     G++ NC TFT + +SC  S +++EG ++F+SM 
Sbjct: 284 WSTLISCYGLHGKGKEALTLYKEMIAHGLQPNCITFTSVLASCSHSGLIDEGRQVFDSMV 343

Query: 355 RDHGIEPMPHRAALCM-----PSGSYWP----FREY*TST*DNLWDAVRANC*YFGKYCW 203
             + +EP     A CM      SGS         E       ++W A+   C        
Sbjct: 344 DAYEVEPRVEHYA-CMVDLLGRSGSIGEALALIYEMPMEPAPSVWGALLGACVVHRNVEV 402

Query: 202 LLVWCIGMLRWERLLPLDYLSWRNLST---MWLSVAYVKQLVDWVVRLH*ELGVRELGMM 32
             +    +   E   P +Y++   +      W  VA ++              +RE GM+
Sbjct: 403 GEIAAYKLFELEAGNPSNYVALCGIYDAVGRWDGVAQMRS------------RMREFGMV 450

Query: 31  KTSGCSWIDV 2
           K  GCSWIDV
Sbjct: 451 KIPGCSWIDV 460


>gb|ONM25996.1| small kernel1 [Zea mays]
          Length = 436

 Score = 70.1 bits (170), Expect = 7e-11
 Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
 Frame = -3

Query: 218 WEVLLAACVVHRNVKVGEIAAFRLFELEE--SINYVALCGLCETVGRLGCAATLRARGER 45
           W  LL+AC +H NV VGE+AA+RLFELEE  + NYV LCG+ + +GR    A LR+R   
Sbjct: 313 WGALLSACAIHNNVDVGEVAAYRLFELEEDNASNYVTLCGIYDAIGRSDSVAGLRSRMRE 372

Query: 44  IG 39
           +G
Sbjct: 373 LG 374



 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 59/186 (31%), Positives = 84/186 (45%), Gaps = 13/186 (6%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLERAK-----GMKSNCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W +LIS YG  G   ++L   +     G+K NC TF  I SSC  S +V++G RIFESM+
Sbjct: 210 WSSLISCYGVHGMGKEALRVYEEMVSVGVKPNCVTFVSILSSCSHSGLVSDGRRIFESMR 269

Query: 355 RDHGIEP-MPHRAALCMPSGSYWPFREY*TST*D-------NLWDAVRANC*YFGKYCWL 200
           + H +EP   H A +    G      E      +       +LW A+ + C         
Sbjct: 270 KVHAVEPTADHYACMVDLLGRAGAIEEAVGLVNEMPMEPGASLWGALLSACAIHNNV--- 326

Query: 199 LVWCIGMLRWERLLPLDYLSWRNLSTMWLSVAYVKQLVDWVVRLH*ELGVRELGMMKTSG 20
               +G +   RL  L+  +  N  T+   +       D V  L   +  RELGM+KT G
Sbjct: 327 ---DVGEVAAYRLFELEEDNASNYVTL-CGIYDAIGRSDSVAGLRSRM--RELGMVKTPG 380

Query: 19  CSWIDV 2
           CSW+ V
Sbjct: 381 CSWVHV 386


>ref|XP_020404227.1| pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Zea mays]
 gb|AGY35718.1| SMK1 [Zea mays]
          Length = 506

 Score = 70.1 bits (170), Expect = 8e-11
 Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
 Frame = -3

Query: 218 WEVLLAACVVHRNVKVGEIAAFRLFELEE--SINYVALCGLCETVGRLGCAATLRARGER 45
           W  LL+AC +H NV VGE+AA+RLFELEE  + NYV LCG+ + +GR    A LR+R   
Sbjct: 383 WGALLSACAIHNNVDVGEVAAYRLFELEEDNASNYVTLCGIYDAIGRSDSVAGLRSRMRE 442

Query: 44  IG 39
           +G
Sbjct: 443 LG 444



 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 59/186 (31%), Positives = 84/186 (45%), Gaps = 13/186 (6%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLERAK-----GMKSNCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W +LIS YG  G   ++L   +     G+K NC TF  I SSC  S +V++G RIFESM+
Sbjct: 280 WSSLISCYGVHGMGKEALRVYEEMVSVGVKPNCVTFVSILSSCSHSGLVSDGRRIFESMR 339

Query: 355 RDHGIEP-MPHRAALCMPSGSYWPFREY*TST*D-------NLWDAVRANC*YFGKYCWL 200
           + H +EP   H A +    G      E      +       +LW A+ + C         
Sbjct: 340 KVHAVEPTADHYACMVDLLGRAGAIEEAVGLVNEMPMEPGASLWGALLSACAIHNNV--- 396

Query: 199 LVWCIGMLRWERLLPLDYLSWRNLSTMWLSVAYVKQLVDWVVRLH*ELGVRELGMMKTSG 20
               +G +   RL  L+  +  N  T+   +       D V  L   +  RELGM+KT G
Sbjct: 397 ---DVGEVAAYRLFELEEDNASNYVTL-CGIYDAIGRSDSVAGLRSRM--RELGMVKTPG 450

Query: 19  CSWIDV 2
           CSW+ V
Sbjct: 451 CSWVHV 456


>gb|PAN39673.1| hypothetical protein PAHAL_G01997 [Panicum hallii]
          Length = 496

 Score = 70.1 bits (170), Expect = 8e-11
 Identities = 61/187 (32%), Positives = 86/187 (45%), Gaps = 14/187 (7%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLERAK-----GMKSNCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W TLIS YG  G  +++L   K     G+K NC TFT I SSC  S +V++G RIFE+M 
Sbjct: 276 WSTLISCYGVHGMGDEALRIYKEMVPRGVKPNCITFTSILSSCSHSGLVSDGRRIFEAMS 335

Query: 355 RDHGIEPMPHRAALCMP---------SGSYWPFREY*TST*DNLWDAVRANC*YFGKYCW 203
           + HG+EP     A CM            +    R+       + W A+ + C        
Sbjct: 336 KVHGVEPTADHYA-CMVDLLGRAGAIEEAVGFIRKMPMEPGASPWGALLSACAMHNNV-- 392

Query: 202 LLVWCIGMLRWERLLPLDYLSWRNLSTMWLSVAYVKQLVDWVVRLH*ELGVRELGMMKTS 23
                +G +   RL  L+  +  N  T+  S+       D V  L   +  +EL M+KT 
Sbjct: 393 ----DVGEIAAYRLFELEEGNASNYVTL-CSIYDAVGRSDCVAGLRSRM--KELDMVKTP 445

Query: 22  GCSWIDV 2
           GCSW+DV
Sbjct: 446 GCSWVDV 452


>ref|XP_006663297.2| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Oryza brachyantha]
          Length = 449

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
 Frame = -3

Query: 218 WEVLLAACVVHRNVKVGEIAAFRLFELEES--INYVALCGLCETVGRLGCAATLRARGER 45
           W  LL+AC +H NV VGEIAA+RLFELEE    NYV LCG+ + VGR    A LR+R   
Sbjct: 330 WGALLSACAMHNNVDVGEIAAYRLFELEEGNVSNYVTLCGIYDAVGRSDGVAGLRSRMRE 389

Query: 44  IG 39
           +G
Sbjct: 390 LG 391



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 56/187 (29%), Positives = 84/187 (44%), Gaps = 14/187 (7%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLER-----AKGMKSNCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W T+I  YG  G   Q+L+      ++G+K N  TFT + SSC  S +V++G +IFES+ 
Sbjct: 227 WSTMIHSYGIHGRGEQALKAYREMLSRGVKPNSITFTSVLSSCSHSGLVSKGRKIFESIT 286

Query: 355 RDHGIEPMPHRAALCMP---------SGSYWPFREY*TST*DNLWDAVRANC*YFGKYCW 203
           + HG+ P     A CM            +    R        ++W A+ + C        
Sbjct: 287 KVHGVCPAAEHYA-CMVDLLGRAGAIEEAVGLIRMMPIEPCASVWGALLSACAMHNNV-- 343

Query: 202 LLVWCIGMLRWERLLPLDYLSWRNLSTMWLSVAYVKQLVDWVVRLH*ELGVRELGMMKTS 23
                +G +   RL  L+  +  N  T+   +       D V  L   +  RELGM+KT 
Sbjct: 344 ----DVGEIAAYRLFELEEGNVSNYVTL-CGIYDAVGRSDGVAGLRSRM--RELGMVKTP 396

Query: 22  GCSWIDV 2
           GCSW+DV
Sbjct: 397 GCSWVDV 403


>ref|XP_015616471.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290,
           chloroplastic [Oryza sativa Japonica Group]
 gb|ABA92133.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 dbj|BAF27858.1| Os11g0213500 [Oryza sativa Japonica Group]
 gb|EAZ17811.1| hypothetical protein OsJ_33354 [Oryza sativa Japonica Group]
 gb|AGY35719.1| SMK1 [Oryza sativa Japonica Group]
 dbj|BAT13198.1| Os11g0213500 [Oryza sativa Japonica Group]
          Length = 470

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 35/62 (56%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
 Frame = -3

Query: 218 WEVLLAACVVHRNVKVGEIAAFRLFELEE--SINYVALCGLCETVGRLGCAATLRARGER 45
           W  LL+AC +H NV VGEIAAFRLFELEE  + NYV LCG+ + VG+    A LR+R   
Sbjct: 379 WGALLSACAMHNNVDVGEIAAFRLFELEEGSASNYVTLCGIYDAVGQSDGVAGLRSRMRE 438

Query: 44  IG 39
           +G
Sbjct: 439 LG 440



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 60/187 (32%), Positives = 83/187 (44%), Gaps = 14/187 (7%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLE-----RAKGMKSNCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W T+I  Y   G   Q+L+      ++G+K N  TFT + SSC  S +V EG +IFESM 
Sbjct: 276 WSTMIHSYSIHGKGEQALKVYMEMLSEGVKPNWITFTSVLSSCSHSGLVTEGRKIFESMT 335

Query: 355 RDHGIEPMPHRAALCMP---------SGSYWPFREY*TST*DNLWDAVRANC*YFGKYCW 203
           + HG+ P     A CM            +    R+       ++W A+ + C        
Sbjct: 336 KVHGVHPAAEHYA-CMVDLLGRAGAIEEAVGLIRKMPMEPCASVWGALLSACAMHNNV-- 392

Query: 202 LLVWCIGMLRWERLLPLDYLSWRNLSTMWLSVAYVKQLVDWVVRLH*ELGVRELGMMKTS 23
                +G +   RL  L+  S  N  T+      V Q  D V  L   +  RELGM+KT 
Sbjct: 393 ----DVGEIAAFRLFELEEGSASNYVTLCGIYDAVGQ-SDGVAGLRSRM--RELGMVKTP 445

Query: 22  GCSWIDV 2
           GCS IDV
Sbjct: 446 GCSRIDV 452


>gb|ACM17537.1| putative pentatricopeptide [Oryza australiensis]
          Length = 470

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 35/62 (56%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
 Frame = -3

Query: 218 WEVLLAACVVHRNVKVGEIAAFRLFELEE--SINYVALCGLCETVGRLGCAATLRARGER 45
           W  LL+AC +H NV VGEIAAFRLFELEE  + NYV LCG+ + VG+    A LR+R   
Sbjct: 379 WGALLSACAMHNNVDVGEIAAFRLFELEEGSASNYVTLCGIYDAVGQSDGVAGLRSRMRE 438

Query: 44  IG 39
           +G
Sbjct: 439 LG 440



 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 59/187 (31%), Positives = 82/187 (43%), Gaps = 14/187 (7%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLE-----RAKGMKSNCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W T+I  Y   G   Q+L+      ++G+K N  TFT + SSC  S +V EG +IFESM 
Sbjct: 276 WSTMIHSYSIHGKGEQALKVYMEMLSQGVKPNWITFTSVLSSCSHSGLVTEGQKIFESMT 335

Query: 355 RDHGIEPMPHRAALCMP---------SGSYWPFREY*TST*DNLWDAVRANC*YFGKYCW 203
           + HG+ P     A CM            +    R+       ++W A+ + C        
Sbjct: 336 KVHGVHPATEHYA-CMVDLLGRAGAIEEAVGLIRKMPMEPCASVWGALLSACAMHNNV-- 392

Query: 202 LLVWCIGMLRWERLLPLDYLSWRNLSTMWLSVAYVKQLVDWVVRLH*ELGVRELGMMKTS 23
                +G +   RL  L+  S  N  T+      V Q  D V  L   +  RELGM+KT 
Sbjct: 393 ----DVGEIAAFRLFELEEGSASNYVTLCGIYDAVGQ-SDGVAGLRSRM--RELGMVKTP 445

Query: 22  GCSWIDV 2
            CS IDV
Sbjct: 446 ACSRIDV 452


>gb|EAY80351.1| hypothetical protein OsI_35522 [Oryza sativa Indica Group]
          Length = 470

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 35/62 (56%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
 Frame = -3

Query: 218 WEVLLAACVVHRNVKVGEIAAFRLFELEE--SINYVALCGLCETVGRLGCAATLRARGER 45
           W  LL+AC +H NV VGEIAAFRLFELEE  + NYV LCG+ + VG+    A LR+R   
Sbjct: 379 WGALLSACAMHNNVDVGEIAAFRLFELEEGSASNYVTLCGIYDAVGQSDGVAGLRSRMRE 438

Query: 44  IG 39
           +G
Sbjct: 439 LG 440



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 60/187 (32%), Positives = 83/187 (44%), Gaps = 14/187 (7%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLE-----RAKGMKSNCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W T+I  Y   G   Q+L+      ++G+K N  TFT + SSC  S +V EG +IFESM 
Sbjct: 276 WSTMIHSYSIHGKGEQALKVYMEMLSEGVKPNWITFTSVLSSCSHSGLVTEGRKIFESMT 335

Query: 355 RDHGIEPMPHRAALCMP---------SGSYWPFREY*TST*DNLWDAVRANC*YFGKYCW 203
           + HG+ P     A CM            +    R+       ++W A+ + C        
Sbjct: 336 KVHGVHPAAEHYA-CMVDLLGRAGAIEEAVGLIRKMPMEPCASVWGALLSACAMHNNV-- 392

Query: 202 LLVWCIGMLRWERLLPLDYLSWRNLSTMWLSVAYVKQLVDWVVRLH*ELGVRELGMMKTS 23
                +G +   RL  L+  S  N  T+      V Q  D V  L   +  RELGM+KT 
Sbjct: 393 ----DVGEIAAFRLFELEEGSASNYVTLCGIYDAVGQ-SDGVAGLRSRM--RELGMVKTP 445

Query: 22  GCSWIDV 2
           GCS IDV
Sbjct: 446 GCSRIDV 452


>ref|XP_010237844.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Brachypodium distachyon]
 ref|XP_014758835.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Brachypodium distachyon]
 ref|XP_014758836.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Brachypodium distachyon]
 gb|KQJ88971.1| hypothetical protein BRADI_4g22520v3 [Brachypodium distachyon]
 gb|PNT63939.1| hypothetical protein BRADI_4g22520v3 [Brachypodium distachyon]
 gb|PNT63940.1| hypothetical protein BRADI_4g22520v3 [Brachypodium distachyon]
          Length = 500

 Score = 68.6 bits (166), Expect = 3e-10
 Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
 Frame = -3

Query: 218 WEVLLAACVVHRNVKVGEIAAFRLFELEE--SINYVALCGLCETVGRLGCAATLRARGER 45
           W  +L+AC  H NV VGEIAA+RLFELEE  + NYV LCG+ + VG+L   A LR+R   
Sbjct: 379 WGAVLSACATHNNVDVGEIAAYRLFELEEDNASNYVTLCGIYDAVGQLDGVAGLRSRMRE 438

Query: 44  IG 39
           +G
Sbjct: 439 LG 440



 Score = 67.0 bits (162), Expect = 9e-10
 Identities = 63/186 (33%), Positives = 84/186 (45%), Gaps = 13/186 (6%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLERAKGM-----KSNCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W TLIS YG  G   ++L   K M     K N  TF  + SSC  S +V +G  IFESM 
Sbjct: 276 WSTLISCYGVHGKGKEALRIYKEMLSQRVKPNGITFMSVLSSCSHSGLVTDGRMIFESMS 335

Query: 355 RDHGIEP-MPHRAALCMPSG-------SYWPFREY*TST*DNLWDAVRANC*YFGKYCWL 200
           + HG+EP   H A++    G       +    R+       + W AV + C         
Sbjct: 336 KVHGVEPTAEHYASMVDILGRAGAIEEAVGLIRKMPMGPCASAWGAVLSACATHNNV--- 392

Query: 199 LVWCIGMLRWERLLPLDYLSWRNLSTMWLSVAYVKQLVDWVVRLH*ELGVRELGMMKTSG 20
               +G +   RL  L+  +  N  T+      V QL D V  L   +  RELGM+KT G
Sbjct: 393 ---DVGEIAAYRLFELEEDNASNYVTLCGIYDAVGQL-DGVAGLRSRM--RELGMVKTPG 446

Query: 19  CSWIDV 2
           CSW+DV
Sbjct: 447 CSWVDV 452


>gb|OQU79144.1| hypothetical protein SORBI_3008G100400 [Sorghum bicolor]
 gb|OQU79145.1| hypothetical protein SORBI_3008G100400 [Sorghum bicolor]
          Length = 436

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 18/191 (9%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLER-----AKGMKSNCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W TLIS YG  G   ++L       ++G+K NC TF  I SSC  S +V++G RIFESM 
Sbjct: 210 WSTLISCYGVHGMGKEALRIYEEMVSRGVKPNCITFISILSSCSHSGLVSDGRRIFESMS 269

Query: 355 RDHGIEPMPHRAALCMP---------SGSYWPFREY*TST*DNLWDAVRANC*YFGKYCW 203
           + H +EP     A CM            +    R+       +LW A+ + C        
Sbjct: 270 KVHAVEPTADHYA-CMVDLLGRAGAIEEAVGIIRKMPMEPGASLWGALLSACATHNNV-- 326

Query: 202 LLVWCIGMLRWERLLPLDYLSWRNLSTMWLSVAYVKQLVDWVVRLH*ELGV----RELGM 35
                +G +   +L  L+  +  N  T+         + D + R     G+    RELGM
Sbjct: 327 ----DVGEVAAYKLFELEEGNASNYVTLC-------GIYDAIGRSDSVSGIRSRMRELGM 375

Query: 34  MKTSGCSWIDV 2
           +KT GCSW+ V
Sbjct: 376 VKTPGCSWVHV 386


>ref|XP_002443200.1| pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Sorghum bicolor]
 ref|XP_021301808.1| pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Sorghum bicolor]
 ref|XP_021301809.1| pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Sorghum bicolor]
          Length = 502

 Score = 66.2 bits (160), Expect = 2e-09
 Identities = 59/191 (30%), Positives = 85/191 (44%), Gaps = 18/191 (9%)
 Frame = -1

Query: 520 W*TLISFYGP*GYRNQSLER-----AKGMKSNCTTFTVIFSSCCRSDIVNEGWRIFESMQ 356
           W TLIS YG  G   ++L       ++G+K NC TF  I SSC  S +V++G RIFESM 
Sbjct: 276 WSTLISCYGVHGMGKEALRIYEEMVSRGVKPNCITFISILSSCSHSGLVSDGRRIFESMS 335

Query: 355 RDHGIEPMPHRAALCMP---------SGSYWPFREY*TST*DNLWDAVRANC*YFGKYCW 203
           + H +EP     A CM            +    R+       +LW A+ + C        
Sbjct: 336 KVHAVEPTADHYA-CMVDLLGRAGAIEEAVGIIRKMPMEPGASLWGALLSACATHNNV-- 392

Query: 202 LLVWCIGMLRWERLLPLDYLSWRNLSTMWLSVAYVKQLVDWVVRLH*ELGV----RELGM 35
                +G +   +L  L+  +  N  T+         + D + R     G+    RELGM
Sbjct: 393 ----DVGEVAAYKLFELEEGNASNYVTLC-------GIYDAIGRSDSVSGIRSRMRELGM 441

Query: 34  MKTSGCSWIDV 2
           +KT GCSW+ V
Sbjct: 442 VKTPGCSWVHV 452