BLASTX nr result

ID: Cheilocostus21_contig00042640 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00042640
         (963 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009412230.1| PREDICTED: zinc finger CCCH domain-containin...   119   4e-26

>ref|XP_009412230.1| PREDICTED: zinc finger CCCH domain-containing protein 65 [Musa
           acuminata subsp. malaccensis]
          Length = 816

 Score =  119 bits (298), Expect = 4e-26
 Identities = 91/240 (37%), Positives = 128/240 (53%), Gaps = 7/240 (2%)
 Frame = +2

Query: 260 VSCAAASQAPDHSSAGEDSMFDRNDDGILSV-VGRGGRESFVGGSPRFNAVLESDFRLEE 436
           VS AA+ + P  SSAG+D + D + DGI++  + R   ES   G+  FN+  +S+  +EE
Sbjct: 67  VSGAASPEVPKSSSAGKDDVVDSHGDGIVAKELRRDDSESVECGNATFNSDSKSE-GIEE 125

Query: 437 KLEIGQGGNAETANSSLPEVSKRQFGGDKNEASYKSKVVGIQHVEGGHETDVGLKEGPIT 616
           K   G GGN ET N  + E  + + G DK EAS   + +G Q  E G   D GL+EG I 
Sbjct: 126 KFGDGTGGNGETVNGLVCERPQTESGDDKAEASNSMEEMGHQREETGQCVDGGLQEGLIV 185

Query: 617 DSKLEISPKENVCFDEVSQSPIHGII-DVSTLVQVLEEH-GSAGALPVEVAGSVFEVDIG 790
           +SKLE      VC DE ++ P   +I D   LV++ +   G  G    EVA  V   ++ 
Sbjct: 186 ESKLE----TEVCMDEATEPPGDNLIFDFPELVELQDSKIGLDGGSHGEVAEGVSGENLS 241

Query: 791 PCLDSVNEIADQVANSEQRNNHEVAVEQINKTPSEALTDEVDTLIM----CSSSNELLHD 958
               S +++   V  SEQR N+E+  E++    SE LTDE + L +     SSSNELL D
Sbjct: 242 QFPGSKDQVTHLVDESEQRMNNELKDERVKGASSEVLTDEFNALSVSPTRMSSSNELLRD 301


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