BLASTX nr result

ID: Cheilocostus21_contig00042501 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00042501
         (429 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018684770.1| PREDICTED: F-box protein At5g39450-like [Mus...    59   3e-07
ref|XP_010911198.1| PREDICTED: F-box protein At5g39450 [Elaeis g...    57   9e-07
ref|XP_009404968.1| PREDICTED: F-box protein At5g39450-like isof...    56   3e-06
ref|XP_018683324.1| PREDICTED: F-box protein At5g39450-like isof...    56   3e-06
ref|XP_009396820.1| PREDICTED: F-box protein At5g39450-like [Mus...    55   8e-06

>ref|XP_018684770.1| PREDICTED: F-box protein At5g39450-like [Musa acuminata subsp.
           malaccensis]
          Length = 618

 Score = 58.9 bits (141), Expect = 3e-07
 Identities = 28/49 (57%), Positives = 29/49 (59%)
 Frame = +2

Query: 281 ISARLYPRDLFALALCCRSLHAAVIGSEKVWLAQCQXXXXXXXXXXQWR 427
           ISARL PRDL AL LCCR LH AV  SEK WL QC           +WR
Sbjct: 24  ISARLRPRDLCALGLCCRGLHVAVAASEKAWLVQCLRLGPPPHLLPRWR 72


>ref|XP_010911198.1| PREDICTED: F-box protein At5g39450 [Elaeis guineensis]
          Length = 631

 Score = 57.4 bits (137), Expect = 9e-07
 Identities = 27/49 (55%), Positives = 30/49 (61%)
 Frame = +2

Query: 281 ISARLYPRDLFALALCCRSLHAAVIGSEKVWLAQCQXXXXXXXXXXQWR 427
           IS  L PRDL +LALCCR L AAV  SEK WLAQC+          +WR
Sbjct: 31  ISGHLQPRDLCSLALCCRGLRAAVAASEKAWLAQCRRLGPPPDLLPRWR 79


>ref|XP_009404968.1| PREDICTED: F-box protein At5g39450-like isoform X2 [Musa acuminata
           subsp. malaccensis]
          Length = 618

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/49 (55%), Positives = 31/49 (63%)
 Frame = +2

Query: 281 ISARLYPRDLFALALCCRSLHAAVIGSEKVWLAQCQXXXXXXXXXXQWR 427
           ISA L   DL ALALCCR LHAA+  SE+VWLAQC+          +WR
Sbjct: 28  ISAGLRHGDLCALALCCRGLHAAIAASERVWLAQCRRLGPPPHLLSRWR 76


>ref|XP_018683324.1| PREDICTED: F-box protein At5g39450-like isoform X1 [Musa acuminata
           subsp. malaccensis]
          Length = 650

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/49 (55%), Positives = 31/49 (63%)
 Frame = +2

Query: 281 ISARLYPRDLFALALCCRSLHAAVIGSEKVWLAQCQXXXXXXXXXXQWR 427
           ISA L   DL ALALCCR LHAA+  SE+VWLAQC+          +WR
Sbjct: 28  ISAGLRHGDLCALALCCRGLHAAIAASERVWLAQCRRLGPPPHLLSRWR 76


>ref|XP_009396820.1| PREDICTED: F-box protein At5g39450-like [Musa acuminata subsp.
           malaccensis]
          Length = 624

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/49 (55%), Positives = 29/49 (59%)
 Frame = +2

Query: 281 ISARLYPRDLFALALCCRSLHAAVIGSEKVWLAQCQXXXXXXXXXXQWR 427
           +SA L P DL ALALCCR L AAV  SEK WLAQC+           WR
Sbjct: 27  VSAYLRPLDLCALALCCRGLRAAVASSEKAWLAQCRRLGPPAHALPLWR 75


Top