BLASTX nr result

ID: Cheilocostus21_contig00042500 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00042500
         (750 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018684770.1| PREDICTED: F-box protein At5g39450-like [Mus...    64   6e-08
ref|XP_009404968.1| PREDICTED: F-box protein At5g39450-like isof...    63   1e-07
ref|XP_018683324.1| PREDICTED: F-box protein At5g39450-like isof...    63   1e-07
ref|XP_010911198.1| PREDICTED: F-box protein At5g39450 [Elaeis g...    60   8e-07
ref|XP_009396820.1| PREDICTED: F-box protein At5g39450-like [Mus...    59   2e-06

>ref|XP_018684770.1| PREDICTED: F-box protein At5g39450-like [Musa acuminata subsp.
           malaccensis]
          Length = 618

 Score = 63.9 bits (154), Expect = 6e-08
 Identities = 32/68 (47%), Positives = 35/68 (51%)
 Frame = +2

Query: 545 SEDCGSXXXXXXXXXXXXXISARLYPRDLFALALCCRSLHAAVIGSEKVWLAQCQXXXXX 724
           +E+CGS             ISARL PRDL AL LCCR LH AV  SEK WL QC      
Sbjct: 5   AENCGSVLFLGLPDDVLALISARLRPRDLCALGLCCRGLHVAVAASEKAWLVQCLRLGPP 64

Query: 725 XXXXXQWR 748
                +WR
Sbjct: 65  PHLLPRWR 72


>ref|XP_009404968.1| PREDICTED: F-box protein At5g39450-like isoform X2 [Musa acuminata
           subsp. malaccensis]
          Length = 618

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 32/68 (47%), Positives = 37/68 (54%)
 Frame = +2

Query: 545 SEDCGSXXXXXXXXXXXXXISARLYPRDLFALALCCRSLHAAVIGSEKVWLAQCQXXXXX 724
           +EDCGS             ISA L   DL ALALCCR LHAA+  SE+VWLAQC+     
Sbjct: 9   AEDCGSGFFLGLPDDVLALISAGLRHGDLCALALCCRGLHAAIAASERVWLAQCRRLGPP 68

Query: 725 XXXXXQWR 748
                +WR
Sbjct: 69  PHLLSRWR 76


>ref|XP_018683324.1| PREDICTED: F-box protein At5g39450-like isoform X1 [Musa acuminata
           subsp. malaccensis]
          Length = 650

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 32/68 (47%), Positives = 37/68 (54%)
 Frame = +2

Query: 545 SEDCGSXXXXXXXXXXXXXISARLYPRDLFALALCCRSLHAAVIGSEKVWLAQCQXXXXX 724
           +EDCGS             ISA L   DL ALALCCR LHAA+  SE+VWLAQC+     
Sbjct: 9   AEDCGSGFFLGLPDDVLALISAGLRHGDLCALALCCRGLHAAIAASERVWLAQCRRLGPP 68

Query: 725 XXXXXQWR 748
                +WR
Sbjct: 69  PHLLSRWR 76


>ref|XP_010911198.1| PREDICTED: F-box protein At5g39450 [Elaeis guineensis]
          Length = 631

 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 30/66 (45%), Positives = 34/66 (51%)
 Frame = +2

Query: 551 DCGSXXXXXXXXXXXXXISARLYPRDLFALALCCRSLHAAVIGSEKVWLAQCQXXXXXXX 730
           +CGS             IS  L PRDL +LALCCR L AAV  SEK WLAQC+       
Sbjct: 14  ECGSSLLLGLPEDVLELISGHLQPRDLCSLALCCRGLRAAVAASEKAWLAQCRRLGPPPD 73

Query: 731 XXXQWR 748
              +WR
Sbjct: 74  LLPRWR 79


>ref|XP_009396820.1| PREDICTED: F-box protein At5g39450-like [Musa acuminata subsp.
           malaccensis]
          Length = 624

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 31/66 (46%), Positives = 33/66 (50%)
 Frame = +2

Query: 551 DCGSXXXXXXXXXXXXXISARLYPRDLFALALCCRSLHAAVIGSEKVWLAQCQXXXXXXX 730
           DCGS             +SA L P DL ALALCCR L AAV  SEK WLAQC+       
Sbjct: 10  DCGSRLFLALPDDVLALVSAYLRPLDLCALALCCRGLRAAVASSEKAWLAQCRRLGPPAH 69

Query: 731 XXXQWR 748
               WR
Sbjct: 70  ALPLWR 75


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