BLASTX nr result

ID: Cheilocostus21_contig00042386 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00042386
         (522 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009392758.1| PREDICTED: squamosa promoter-binding-like pr...    79   8e-14
ref|XP_018679621.1| PREDICTED: squamosa promoter-binding-like pr...    79   9e-14
ref|XP_009396218.1| PREDICTED: squamosa promoter-binding-like pr...    63   2e-08
ref|XP_018680668.1| PREDICTED: squamosa promoter-binding-like pr...    63   2e-08
ref|XP_009418579.1| PREDICTED: squamosa promoter-binding-like pr...    59   4e-07
ref|XP_009395453.1| PREDICTED: squamosa promoter-binding-like pr...    56   5e-06

>ref|XP_009392758.1| PREDICTED: squamosa promoter-binding-like protein 12 isoform X2
           [Musa acuminata subsp. malaccensis]
 ref|XP_009392759.1| PREDICTED: squamosa promoter-binding-like protein 12 isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 437

 Score = 78.6 bits (192), Expect = 8e-14
 Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
 Frame = +2

Query: 2   SDSSWGSLNPRQSSSMIDLVDANSVSLARPMMPAMN-SSHWMHXXXXXXXXXILPFIMHR 178
           S +SWGS +P Q+SS+++ VDA+  S A+PM+P +N SSHW+H         +LPF MHR
Sbjct: 352 STNSWGSPDPGQTSSIVEFVDASHTSTAQPMVPTINSSSHWIHGQPLAQQPQLLPFTMHR 411

Query: 179 SSNEPQDFQLQKDHPYRN 232
           S N+PQ+  LQ + PYR+
Sbjct: 412 SGNQPQELLLQ-NTPYRD 428


>ref|XP_018679621.1| PREDICTED: squamosa promoter-binding-like protein 12 isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 469

 Score = 78.6 bits (192), Expect = 9e-14
 Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
 Frame = +2

Query: 2   SDSSWGSLNPRQSSSMIDLVDANSVSLARPMMPAMN-SSHWMHXXXXXXXXXILPFIMHR 178
           S +SWGS +P Q+SS+++ VDA+  S A+PM+P +N SSHW+H         +LPF MHR
Sbjct: 384 STNSWGSPDPGQTSSIVEFVDASHTSTAQPMVPTINSSSHWIHGQPLAQQPQLLPFTMHR 443

Query: 179 SSNEPQDFQLQKDHPYRN 232
           S N+PQ+  LQ + PYR+
Sbjct: 444 SGNQPQELLLQ-NTPYRD 460


>ref|XP_009396218.1| PREDICTED: squamosa promoter-binding-like protein 3 isoform X2
           [Musa acuminata subsp. malaccensis]
          Length = 423

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/86 (41%), Positives = 48/86 (55%)
 Frame = +2

Query: 2   SDSSWGSLNPRQSSSMIDLVDANSVSLARPMMPAMNSSHWMHXXXXXXXXXILPFIMHRS 181
           S SSW S +PRQ+  + + VDANS            S+HW++         +LPFIM R 
Sbjct: 351 STSSWASPDPRQTPPVTEFVDANS------------SNHWIYGQPLAQQAQLLPFIMRRY 398

Query: 182 SNEPQDFQLQKDHPYRNVPCGRSRIY 259
            N+PQ+FQLQK  PYR+     S+IY
Sbjct: 399 DNQPQEFQLQK-IPYRDAIFDPSQIY 423


>ref|XP_018680668.1| PREDICTED: squamosa promoter-binding-like protein 12 isoform X1
           [Musa acuminata subsp. malaccensis]
          Length = 425

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/86 (41%), Positives = 48/86 (55%)
 Frame = +2

Query: 2   SDSSWGSLNPRQSSSMIDLVDANSVSLARPMMPAMNSSHWMHXXXXXXXXXILPFIMHRS 181
           S SSW S +PRQ+  + + VDANS            S+HW++         +LPFIM R 
Sbjct: 353 STSSWASPDPRQTPPVTEFVDANS------------SNHWIYGQPLAQQAQLLPFIMRRY 400

Query: 182 SNEPQDFQLQKDHPYRNVPCGRSRIY 259
            N+PQ+FQLQK  PYR+     S+IY
Sbjct: 401 DNQPQEFQLQK-IPYRDAIFDPSQIY 425


>ref|XP_009418579.1| PREDICTED: squamosa promoter-binding-like protein 12 [Musa
           acuminata subsp. malaccensis]
 ref|XP_009418580.1| PREDICTED: squamosa promoter-binding-like protein 12 [Musa
           acuminata subsp. malaccensis]
 ref|XP_009418581.1| PREDICTED: squamosa promoter-binding-like protein 12 [Musa
           acuminata subsp. malaccensis]
          Length = 440

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = +2

Query: 2   SDSSWGSLNPRQSSSMIDLVDANSVSLARPMMPAMNSS-HWMHXXXXXXXXXILPFIMHR 178
           S ++WGS +P Q SS+++ +D N  S A PMMP +NSS  +           +LPF MHR
Sbjct: 358 STNAWGSPDPGQPSSIVEFLDTNHHSTAEPMMPTLNSSGQFFPGQSLAQQAQLLPFTMHR 417

Query: 179 SSNEPQDFQLQ 211
             + PQ  QLQ
Sbjct: 418 DDSHPQGVQLQ 428


>ref|XP_009395453.1| PREDICTED: squamosa promoter-binding-like protein 12 [Musa
           acuminata subsp. malaccensis]
          Length = 471

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
 Frame = +2

Query: 2   SDSSWGSLNPR-QSSSMIDLVDANSVSLARPMMPAMN-SSHWMHXXXXXXXXXILPFIMH 175
           S SSWGS +PR    +   ++DA   S A+P +P  N S+HW++          L F MH
Sbjct: 385 STSSWGSPDPRGNGQTPFIIMDAKHASSAQPTVPVANPSNHWIYGEPVSQQAQPLLFSMH 444

Query: 176 RSSNEPQDFQLQKDHPYRNVPCGRSRIY 259
           R+ N+ Q+FQL K  PYR+     ++IY
Sbjct: 445 RNGNQTQEFQLPK-APYRDTFFDPTQIY 471


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