BLASTX nr result

ID: Cheilocostus21_contig00042381 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00042381
         (416 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009391441.1| PREDICTED: protein trichome birefringence-li...    72   9e-12
ref|XP_009417662.1| PREDICTED: protein trichome birefringence-li...    64   6e-09

>ref|XP_009391441.1| PREDICTED: protein trichome birefringence-like [Musa acuminata
           subsp. malaccensis]
          Length = 715

 Score = 71.6 bits (174), Expect = 9e-12
 Identities = 57/140 (40%), Positives = 68/140 (48%), Gaps = 11/140 (7%)
 Frame = +3

Query: 3   SAVVPSKRIDLPTKNQTKV--EDASKGEATPTAKNMSVVATPP-KNQSVTRVDSTKNGD- 170
           S V P+K  DLPTKNQTKV   D SK +A   AKN++V   PP KN++ T V S  NGD 
Sbjct: 217 SVVDPTKTRDLPTKNQTKVGDRDDSKKDAVLAAKNLTVTGAPPKKNETTTAVGSAVNGDL 276

Query: 171 ---NQ----VASKGTQTPTXXXXXXXXXXXXXXTQKNGAAETNKSSGVRSXXXXXXXXXX 329
              NQ    VASK  Q                 T K+GAA  N+SS              
Sbjct: 277 PSKNQIDKGVASKVNQV-----------LNSTATPKSGAAAKNQSSSGVPSITKSTGTTT 325

Query: 330 XXXXXXGAPTLSASFLKGNG 389
                 GAP+LS+S +KGNG
Sbjct: 326 AKSEEKGAPSLSSSLVKGNG 345


>ref|XP_009417662.1| PREDICTED: protein trichome birefringence-like [Musa acuminata
           subsp. malaccensis]
          Length = 719

 Score = 63.5 bits (153), Expect = 6e-09
 Identities = 57/149 (38%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
 Frame = +3

Query: 3   SAVVPSKRIDLPTKNQTKVEDASKGEATPTAKNMSVVATPPK-NQSVTRVDSTKNG---- 167
           S V P K  D P+KNQTKVED SK +A   AKN++V   P K N++ T V S K+G    
Sbjct: 219 SGVGPPKSGDSPSKNQTKVEDGSKKDAILAAKNLTVTGAPLKNNETATGVGSLKHGHLPV 278

Query: 168 DNQ----VASKGTQTPTXXXXXXXXXXXXXXTQKNGAAETNKSSGVRSXXXXXXXXXXXX 335
            NQ    VASK    P                 KNGAA  N+SS                
Sbjct: 279 KNQTGKGVASKANPVP------PNGKESGTNAPKNGAAANNQSSSA-LPSVTKSTGATPK 331

Query: 336 XXXXGAPTLSASFLKGNGSAV--SGGGNK 416
               GA  LS S +K NGS+V  SGG  +
Sbjct: 332 KDKEGASGLSDSLVKRNGSSVPTSGGDGR 360


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