BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00042375
         (572 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]                   159   4e-55
emb|CEH19729.1| polyprotein, partial [Grapevine roditis leaf dis...   157   9e-52
gb|ANK58545.1| polyprotein [Fig badnavirus 1]                         158   1e-51
ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discolor...   158   2e-51
emb|CEH19727.1| polyprotein, partial [Grapevine roditis leaf dis...   156   2e-51
gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration...   158   3e-51
gb|ANK58548.1| polyprotein [Fig badnavirus 1]                         158   6e-51
gb|ANK58539.1| polyprotein [Fig badnavirus 1]                         158   6e-51
gb|ANK58536.1| polyprotein [Fig badnavirus 1]                         158   6e-51
ref|NP_041734.1| polyprotein [Cacao swollen shoot virus] >gi|347...   150   6e-51
gb|ANK58542.1| polyprotein [Fig badnavirus 1]                         158   8e-51
emb|CEH19731.1| polyprotein, partial [Grapevine roditis leaf dis...   155   8e-51
gb|ATZ69467.1| ORF3 polyprotein [Cacao swollen shoot Ghana J virus]   150   1e-50
gb|ATZ69445.1| ORF3 polyprotein [Cacao swollen shoot Togo A virus]    149   1e-50
gb|ASG91840.1| polyprotein [Cacao swollen shoot virus]                151   1e-50
gb|ATZ69459.1| ORF3 polyprotein [Cacao swollen shoot CE virus]        148   1e-50
emb|CAD59232.1| polyprotein [Cacao swollen shoot virus]               150   2e-50
emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao s...   147   3e-50
gb|ATZ69449.1| ORF3 polyprotein [Cacao swollen shoot virus]           150   3e-50
emb|CAE81279.1| polyprotein [Cacao swollen shoot virus]               150   3e-50

>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
          Length = 1846

 Score =  159 bits (402), Expect(2) = 4e-55
 Identities = 75/117 (64%), Positives = 94/117 (80%)
 Frame = -3

Query: 354 EALRCXXXXXXXXXXXQAESFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDN 175
           EA+ C           Q +S+  L+R+G QFIH+G++QVRIQILHR DEGT ALV+FRDN
Sbjct: 108 EAILCVDGQQQDRLVIQPDSYEALRRSGFQFIHLGIMQVRIQILHRADEGTAALVVFRDN 167

Query: 174 RWQGDQSIFATMEVDLTTEN*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
           RWQGDQ+IFATME+DLT+   L+YVIPDT+ T+RDFY+NIQISI TRGYENW+NG++
Sbjct: 168 RWQGDQAIFATMEIDLTSGTQLVYVIPDTMMTLRDFYRNIQISILTRGYENWRNGEA 224



 Score = 83.6 bits (205), Expect(2) = 4e-55
 Identities = 42/78 (53%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
 Frame = -1

Query: 572 RRYRQGQRRLFTAR----RWAQRIFRGRYNQTLERQISPDEQLQLSLRNRLHLVPTEILY 405
           R YR+GQRR F AR    R A RI   R+NQTLE+ ++P+E LQ S++ R +LVP E+LY
Sbjct: 31  RDYRRGQRRRFVARQAARRIASRITGRRFNQTLEQVVNPEESLQQSMQERANLVPAEVLY 90

Query: 404 QSQRSDENHRVYLHQTEK 351
           +S+R D NHRVY H++E+
Sbjct: 91  RSRRDDINHRVYSHRSEE 108


>emb|CEH19729.1| polyprotein, partial [Grapevine roditis leaf
           discoloration-associated virus]
          Length = 234

 Score =  157 bits (396), Expect(2) = 9e-52
 Identities = 71/99 (71%), Positives = 89/99 (89%)
 Frame = -3

Query: 300 ESFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDNRWQGDQSIFATMEVDLTT 121
           +SF ELQR+G+QFIH+G++QVRIQILHR DEGT+ALV+FRDNRWQGDQSIFA  EVDLT 
Sbjct: 129 DSFQELQRSGMQFIHLGVLQVRIQILHRADEGTMALVVFRDNRWQGDQSIFAIAEVDLTR 188

Query: 120 EN*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
            + ++YVIPDT+ TI DFY+N+QISIQT GY++WQNG++
Sbjct: 189 GSQIVYVIPDTMMTIGDFYRNVQISIQTTGYDSWQNGEA 227



 Score = 74.7 bits (182), Expect(2) = 9e-52
 Identities = 37/78 (47%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
 Frame = -1

Query: 572 RRYRQGQRRLFTA----RRWAQRIFRGRYNQTLERQISPDEQLQLSLRNRLHLVPTEILY 405
           R YR+ QRR F A    RR   RI   RYNQTLE+ ++P+E+L  S++ R +LVP E+LY
Sbjct: 35  RDYRRNQRRRFVAEQALRRTVGRIRGRRYNQTLEQTVNPEEELSQSMQERANLVPAEVLY 94

Query: 404 QSQRSDENHRVYLHQTEK 351
           +++R + NH+VY H++E+
Sbjct: 95  RTRRDNINHQVYNHRSEE 112


>gb|ANK58545.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  158 bits (400), Expect(2) = 1e-51
 Identities = 72/98 (73%), Positives = 88/98 (89%)
 Frame = -3

Query: 297 SFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDNRWQGDQSIFATMEVDLTTE 118
           SF ELQR+G+QFIH+G++QVR+QILHR DEGT+ALV+FRDNRWQGDQSIFA  EVDLT  
Sbjct: 129 SFQELQRSGMQFIHLGVLQVRLQILHRADEGTMALVVFRDNRWQGDQSIFAISEVDLTRG 188

Query: 117 N*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
           + ++YVIPDT+ TI DFY+N+QISIQT GYENWQNG++
Sbjct: 189 SQIVYVIPDTMMTIGDFYRNVQISIQTSGYENWQNGEA 226



 Score = 72.8 bits (177), Expect(2) = 1e-51
 Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
 Frame = -1

Query: 572 RRYRQGQRRLFTA----RRWAQRIFRGRYNQTLERQISPDEQLQLSLRNRLHLVPTEILY 405
           R YR+ QRR F A    RR   R+   RYNQTLE+ + P+ +L LS++ R +LVP E+LY
Sbjct: 34  RDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNLSMQERANLVPAEVLY 93

Query: 404 QSQRSDENHRVYLHQTEK 351
           +S+R + NH+VY H++E+
Sbjct: 94  RSRRDNINHQVYNHRSEE 111


>ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
 emb|CDN68224.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
          Length = 1830

 Score =  158 bits (399), Expect(2) = 2e-51
 Identities = 72/99 (72%), Positives = 89/99 (89%)
 Frame = -3

Query: 300 ESFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDNRWQGDQSIFATMEVDLTT 121
           +SF ELQR+G+QFIH+G++QVRIQILHR DEGT+ALV+FRDNRWQGDQSIFA  EVDLT 
Sbjct: 131 DSFQELQRSGMQFIHLGVLQVRIQILHRADEGTMALVVFRDNRWQGDQSIFAIAEVDLTR 190

Query: 120 EN*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
            + ++YVIPDT+ TI DFY+N+QISIQT GYE+WQNG++
Sbjct: 191 GSQIVYVIPDTMMTIGDFYRNVQISIQTTGYESWQNGEA 229



 Score = 72.8 bits (177), Expect(2) = 2e-51
 Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
 Frame = -1

Query: 572 RRYRQGQRRLFTA----RRWAQRIFRGRYNQTLERQISPDEQLQLSLRNRLHLVPTEILY 405
           R YR+ QRR F A    RR   +I   RYNQTLE+ I P+E+L  S++ R +LVP E+LY
Sbjct: 37  RDYRRNQRRRFIAEQALRRTIGKIRGRRYNQTLEQTIDPEEELSQSMQERANLVPAEVLY 96

Query: 404 QSQRSDENHRVYLHQTEK 351
           +++R + NH+VY H++E+
Sbjct: 97  RTRRDNINHQVYNHRSEE 114


>emb|CEH19727.1| polyprotein, partial [Grapevine roditis leaf
           discoloration-associated virus]
          Length = 236

 Score =  156 bits (395), Expect(2) = 2e-51
 Identities = 70/99 (70%), Positives = 89/99 (89%)
 Frame = -3

Query: 300 ESFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDNRWQGDQSIFATMEVDLTT 121
           +SF ELQR+G+QFIH+G++QVRIQILHR DEGT+ALV+FRDNRWQGDQSIFA  EVDLT 
Sbjct: 131 DSFQELQRSGMQFIHLGVLQVRIQILHRADEGTMALVVFRDNRWQGDQSIFAIAEVDLTR 190

Query: 120 EN*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
            + ++YVIPDT+ T+ DFY+N+QISIQT GY++WQNG++
Sbjct: 191 GSQIVYVIPDTMMTVGDFYRNVQISIQTTGYDSWQNGEA 229



 Score = 74.3 bits (181), Expect(2) = 2e-51
 Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
 Frame = -1

Query: 572 RRYRQGQRRLFTA----RRWAQRIFRGRYNQTLERQISPDEQLQLSLRNRLHLVPTEILY 405
           R YR+ QRR F A    RR   RI   RYNQTLE+ I P+E+L  S++ R +LVP E+LY
Sbjct: 37  RDYRRNQRRRFVAEQALRRTIGRIRGRRYNQTLEQTIDPEEELSQSMQERANLVPAEVLY 96

Query: 404 QSQRSDENHRVYLHQTEK 351
           +++R + NH+VY H++E+
Sbjct: 97  RTRRDNINHQVYNHRSEE 114


>gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
          Length = 1789

 Score =  158 bits (399), Expect(2) = 3e-51
 Identities = 72/99 (72%), Positives = 89/99 (89%)
 Frame = -3

Query: 300 ESFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDNRWQGDQSIFATMEVDLTT 121
           +SF ELQR+G+QFIH+G++QVRIQILHR DEGT+ALV+FRDNRWQGDQSIFA  EVDLT 
Sbjct: 129 DSFQELQRSGMQFIHLGVLQVRIQILHRADEGTMALVVFRDNRWQGDQSIFAIAEVDLTR 188

Query: 120 EN*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
            + ++YVIPDT+ TI DFY+N+QISIQT GYE+WQNG++
Sbjct: 189 GSQIVYVIPDTMMTIGDFYRNVQISIQTTGYESWQNGEA 227



 Score = 72.0 bits (175), Expect(2) = 3e-51
 Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
 Frame = -1

Query: 572 RRYRQGQRRLFTA----RRWAQRIFRGRYNQTLERQISPDEQLQLSLRNRLHLVPTEILY 405
           R YR+ QRR F A    RR   +I   RYNQTLE+ + P+E+L  S++ R +LVP E+LY
Sbjct: 35  RDYRRSQRRRFVAEQALRRTIGKIRGRRYNQTLEQIVDPEEELSQSMQERANLVPAEVLY 94

Query: 404 QSQRSDENHRVYLHQTEK 351
           +++R + NH+VY H++E+
Sbjct: 95  RTRRDNINHQVYNHRSEE 112


>gb|ANK58548.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  158 bits (400), Expect(2) = 6e-51
 Identities = 72/98 (73%), Positives = 88/98 (89%)
 Frame = -3

Query: 297 SFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDNRWQGDQSIFATMEVDLTTE 118
           SF ELQR+G+QFIH+G++QVR+QILHR DEGT+ALV+FRDNRWQGDQSIFA  EVDLT  
Sbjct: 129 SFQELQRSGMQFIHLGVLQVRLQILHRADEGTMALVVFRDNRWQGDQSIFAISEVDLTRG 188

Query: 117 N*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
           + ++YVIPDT+ TI DFY+N+QISIQT GYENWQNG++
Sbjct: 189 SQIVYVIPDTMMTIGDFYRNVQISIQTSGYENWQNGEA 226



 Score = 70.5 bits (171), Expect(2) = 6e-51
 Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
 Frame = -1

Query: 572 RRYRQGQRRLFTA----RRWAQRIFRGRYNQTLERQISPDEQLQLSLRNRLHLVPTEILY 405
           R YR+ QRR F A    RR   R+   RYNQTLE+ + P+ +L  S++ R +LVP E+LY
Sbjct: 34  RDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLY 93

Query: 404 QSQRSDENHRVYLHQTEK 351
           +S+R + NH+VY H++E+
Sbjct: 94  RSRRDNINHQVYNHRSEE 111


>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  158 bits (400), Expect(2) = 6e-51
 Identities = 72/98 (73%), Positives = 88/98 (89%)
 Frame = -3

Query: 297 SFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDNRWQGDQSIFATMEVDLTTE 118
           SF ELQR+G+QFIH+G++QVR+QILHR DEGT+ALV+FRDNRWQGDQSIFA  EVDLT  
Sbjct: 129 SFQELQRSGMQFIHLGVLQVRLQILHRADEGTMALVVFRDNRWQGDQSIFAISEVDLTRG 188

Query: 117 N*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
           + ++YVIPDT+ TI DFY+N+QISIQT GYENWQNG++
Sbjct: 189 SQIVYVIPDTMMTIGDFYRNVQISIQTSGYENWQNGEA 226



 Score = 70.5 bits (171), Expect(2) = 6e-51
 Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
 Frame = -1

Query: 572 RRYRQGQRRLFTA----RRWAQRIFRGRYNQTLERQISPDEQLQLSLRNRLHLVPTEILY 405
           R YR+ QRR F A    RR   R+   RYNQTLE+ + P+ +L  S++ R +LVP E+LY
Sbjct: 34  RDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLY 93

Query: 404 QSQRSDENHRVYLHQTEK 351
           +S+R + NH+VY H++E+
Sbjct: 94  RSRRDNINHQVYNHRSEE 111


>gb|ANK58536.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  158 bits (400), Expect(2) = 6e-51
 Identities = 72/98 (73%), Positives = 88/98 (89%)
 Frame = -3

Query: 297 SFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDNRWQGDQSIFATMEVDLTTE 118
           SF ELQR+G+QFIH+G++QVR+QILHR DEGT+ALV+FRDNRWQGDQSIFA  EVDLT  
Sbjct: 129 SFQELQRSGMQFIHLGVLQVRLQILHRTDEGTMALVVFRDNRWQGDQSIFAISEVDLTRG 188

Query: 117 N*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
           + ++YVIPDT+ TI DFY+N+QISIQT GYENWQNG++
Sbjct: 189 SQIVYVIPDTMMTIGDFYRNVQISIQTSGYENWQNGEA 226



 Score = 70.5 bits (171), Expect(2) = 6e-51
 Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
 Frame = -1

Query: 572 RRYRQGQRRLFTA----RRWAQRIFRGRYNQTLERQISPDEQLQLSLRNRLHLVPTEILY 405
           R YR+ QRR F A    RR   R+   RYNQTLE+ + P+ +L  S++ R +LVP E+LY
Sbjct: 34  RDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLY 93

Query: 404 QSQRSDENHRVYLHQTEK 351
           +S+R + NH+VY H++E+
Sbjct: 94  RSRRDNINHQVYNHRSEE 111


>ref|NP_041734.1| polyprotein [Cacao swollen shoot virus]
 gb|AAA03171.1| polyprotein [Cacao swollen shoot virus]
          Length = 1834

 Score =  150 bits (379), Expect(2) = 6e-51
 Identities = 71/117 (60%), Positives = 91/117 (77%)
 Frame = -3

Query: 354 EALRCXXXXXXXXXXXQAESFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDN 175
           E++ C           Q ES  +LQR G+ FIHIG++QVRIQILHR++EGT+ALV+FRDN
Sbjct: 109 ESVLCVGGSQVDRAFIQPESLEQLQRTGMSFIHIGILQVRIQILHRQEEGTMALVVFRDN 168

Query: 174 RWQGDQSIFATMEVDLTTEN*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
           RW GDQSIFA ME+DLT  + L++VIPDT+ TI DF +N+Q+SI TRGYENWQNG++
Sbjct: 169 RWSGDQSIFAQMEIDLTKGSQLVFVIPDTMMTIGDFARNVQLSILTRGYENWQNGEA 225



 Score = 78.6 bits (192), Expect(2) = 6e-51
 Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
 Frame = -1

Query: 572 RRYRQGQRRLFTARRWAQRIFRG----RYNQTLERQISPDEQLQLSLRNRLHLVPTEILY 405
           R YR+GQRR+F  RR A+R+ R     RY +TLE++I P   L+LS++ R  LVP E+LY
Sbjct: 32  RDYRRGQRRIFNLRRRARRLRRSMMGSRYQETLEQEIDPQTTLRLSMQERARLVPAEVLY 91

Query: 404 QSQRSDENHRVYLHQTEK 351
           +S+R   +HRVY H++E+
Sbjct: 92  RSRRDTVHHRVYTHRSEE 109


>gb|ANK58542.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  158 bits (400), Expect(2) = 8e-51
 Identities = 72/98 (73%), Positives = 88/98 (89%)
 Frame = -3

Query: 297 SFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDNRWQGDQSIFATMEVDLTTE 118
           SF ELQR+G+QFIH+G++QVR+QILHR DEGT+ALV+FRDNRWQGDQSIFA  EVDLT  
Sbjct: 129 SFQELQRSGMQFIHLGVLQVRLQILHRADEGTMALVVFRDNRWQGDQSIFAISEVDLTRG 188

Query: 117 N*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
           + ++YVIPDT+ TI DFY+N+QISIQT GYENWQNG++
Sbjct: 189 SQIVYVIPDTMMTIGDFYRNVQISIQTSGYENWQNGEA 226



 Score = 70.1 bits (170), Expect(2) = 8e-51
 Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
 Frame = -1

Query: 572 RRYRQGQRRLFTA----RRWAQRIFRGRYNQTLERQISPDEQLQLSLRNRLHLVPTEILY 405
           R YR+ QRR F A    RR   R+   RYNQTLE+ + P+ +L  S++ R +LVP E+LY
Sbjct: 34  RDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERANLVPAEVLY 93

Query: 404 QSQRSDENHRVYLHQTEK 351
           +S+R + NH++Y H++E+
Sbjct: 94  RSRRDNINHQIYNHRSEE 111


>emb|CEH19731.1| polyprotein, partial [Grapevine roditis leaf
           discoloration-associated virus]
          Length = 235

 Score =  155 bits (392), Expect(2) = 8e-51
 Identities = 71/99 (71%), Positives = 88/99 (88%)
 Frame = -3

Query: 300 ESFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDNRWQGDQSIFATMEVDLTT 121
           +SF EL+R+G+QFIH+G++QVRIQILHR DEGT+ALV+FRDNRWQGDQSIFA  EVDLT 
Sbjct: 131 DSFQELRRSGMQFIHLGVLQVRIQILHRADEGTMALVVFRDNRWQGDQSIFAIAEVDLTR 190

Query: 120 EN*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
            + ++YVIPDT+ TI DFY N+QISIQT GYE+WQNG++
Sbjct: 191 GSQIVYVIPDTMMTIGDFYNNVQISIQTIGYESWQNGEA 229



 Score = 73.2 bits (178), Expect(2) = 8e-51
 Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
 Frame = -1

Query: 572 RRYRQGQRRLFTA----RRWAQRIFRGRYNQTLERQISPDEQLQLSLRNRLHLVPTEILY 405
           R YR+ QRR F A    RR   +I   RYNQTLE+ I P+E+L  S++ R +LVP E+LY
Sbjct: 37  RDYRRNQRRRFVAEQALRRTIGKIRGRRYNQTLEQTIDPEEELSQSMQERANLVPAEVLY 96

Query: 404 QSQRSDENHRVYLHQTEK 351
           +++R + NH+VY H++E+
Sbjct: 97  RTRRDNINHQVYNHRSEE 114


>gb|ATZ69467.1| ORF3 polyprotein [Cacao swollen shoot Ghana J virus]
          Length = 1868

 Score =  150 bits (378), Expect(2) = 1e-50
 Identities = 71/117 (60%), Positives = 90/117 (76%)
 Frame = -3

Query: 354 EALRCXXXXXXXXXXXQAESFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDN 175
           E++ C           Q ES  ELQR G  FIH+G++QVRIQILHR++EGT+AL++FRDN
Sbjct: 120 ESILCTEGTQVDRTFIQPESLAELQRAGFAFIHVGILQVRIQILHRQEEGTMALIVFRDN 179

Query: 174 RWQGDQSIFATMEVDLTTEN*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
           RW G+QSIFA ME+DLT  + L+YVIPDT+ TI DF +N+QISI TRGYENWQNG++
Sbjct: 180 RWTGEQSIFAQMEIDLTKGSQLVYVIPDTMMTIGDFARNVQISIITRGYENWQNGEA 236



 Score = 78.2 bits (191), Expect(2) = 1e-50
 Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 12/86 (13%)
 Frame = -1

Query: 572 RRYRQGQRRLFTARRWAQRIFR------------GRYNQTLERQISPDEQLQLSLRNRLH 429
           R YR+GQRR F  RR A+R+ R            GRY  TLE++I P   L+LS++ R  
Sbjct: 35  RSYRRGQRRAFNLRRRARRLRRSLSLGSSSHVPGGRYQDTLEQEIDPQATLRLSMQERAR 94

Query: 428 LVPTEILYQSQRSDENHRVYLHQTEK 351
           LVP E+LY+S+R   NHRVY H++E+
Sbjct: 95  LVPAEVLYRSRRDTVNHRVYTHRSEE 120


>gb|ATZ69445.1| ORF3 polyprotein [Cacao swollen shoot Togo A virus]
          Length = 1862

 Score =  149 bits (377), Expect(2) = 1e-50
 Identities = 68/99 (68%), Positives = 86/99 (86%)
 Frame = -3

Query: 300 ESFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDNRWQGDQSIFATMEVDLTT 121
           ES  +LQR G+ FIHIG++QVRIQILHR++EGT+ALV+FRDNRW GDQSIFA ME+DLT 
Sbjct: 125 ESLEQLQRTGMSFIHIGILQVRIQILHRQEEGTMALVVFRDNRWTGDQSIFAQMEIDLTK 184

Query: 120 EN*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
            + L++VIPDT+ TI DF +N+Q+SI TRGYENWQNG++
Sbjct: 185 GSQLVFVIPDTMMTIGDFARNVQLSILTRGYENWQNGEA 223



 Score = 78.6 bits (192), Expect(2) = 1e-50
 Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
 Frame = -1

Query: 572 RRYRQGQRRLFTARRWAQRIFRG----RYNQTLERQISPDEQLQLSLRNRLHLVPTEILY 405
           R YR+GQRR+F  RR A+R+ R     RY +TLE++I P   L+LS++ R  LVP E+LY
Sbjct: 31  RDYRRGQRRIFNLRRRARRLRRSMTGSRYQETLEQEIDPQTTLRLSMQERARLVPAEVLY 90

Query: 404 QSQRSDENHRVYLHQTEK 351
           +S+R   +HRVY H++E+
Sbjct: 91  RSRRDTVHHRVYTHRSEE 108


>gb|ASG91840.1| polyprotein [Cacao swollen shoot virus]
          Length = 1879

 Score =  151 bits (381), Expect(2) = 1e-50
 Identities = 71/117 (60%), Positives = 91/117 (77%)
 Frame = -3

Query: 354 EALRCXXXXXXXXXXXQAESFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDN 175
           E++ C           Q ES+ +LQR G  FIH+G++QVRIQILHR++EGT+AL++FRDN
Sbjct: 120 ESILCTEGSQIDRAFIQPESYDQLQRAGFSFIHVGILQVRIQILHRQEEGTMALIVFRDN 179

Query: 174 RWQGDQSIFATMEVDLTTEN*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
           RW GDQSIFA ME+DLT  + L+YVIPDT+ TI DF +N+QISI TRGYENWQNG++
Sbjct: 180 RWTGDQSIFAQMEIDLTKGSQLVYVIPDTMMTIGDFARNVQISILTRGYENWQNGEA 236



 Score = 76.6 bits (187), Expect(2) = 1e-50
 Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 11/85 (12%)
 Frame = -1

Query: 572 RRYRQGQRRLFTARRWAQRIFR-----------GRYNQTLERQISPDEQLQLSLRNRLHL 426
           R YRQGQRR+   RR A+R+ R           GRY +TLE++I P   L+LS++ R  L
Sbjct: 36  RDYRQGQRRMHNLRRRARRLRRSLSQGASSSHGGRYQETLEQEIDPQTTLRLSMQERARL 95

Query: 425 VPTEILYQSQRSDENHRVYLHQTEK 351
           VP E+LY+S+    NHRVY H++E+
Sbjct: 96  VPAEVLYRSRSDTVNHRVYTHRSEE 120


>gb|ATZ69459.1| ORF3 polyprotein [Cacao swollen shoot CE virus]
          Length = 1855

 Score =  148 bits (374), Expect(2) = 1e-50
 Identities = 70/117 (59%), Positives = 90/117 (76%)
 Frame = -3

Query: 354 EALRCXXXXXXXXXXXQAESFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDN 175
           E++ C           Q ES  +L+R G  F+HIG++QVRIQILHR++EGT+AL++FRDN
Sbjct: 114 ESILCTEGNQIDRTFIQPESLEQLKRAGFAFVHIGILQVRIQILHRQEEGTMALIVFRDN 173

Query: 174 RWQGDQSIFATMEVDLTTEN*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
           RW GDQSIFA MEVDLT  + L+Y+IPDT+ TI DF +N+QISI TRGYENWQNG++
Sbjct: 174 RWTGDQSIFAQMEVDLTKGSQLVYIIPDTMMTIGDFARNVQISILTRGYENWQNGEA 230



 Score = 79.3 bits (194), Expect(2) = 1e-50
 Identities = 39/80 (48%), Positives = 55/80 (68%), Gaps = 6/80 (7%)
 Frame = -1

Query: 572 RRYRQGQRRLFTARRWAQRIFR------GRYNQTLERQISPDEQLQLSLRNRLHLVPTEI 411
           R YRQGQRR+   RR A+R+ R      GR+ +TLE++I P   L+LS++ R  LVP E+
Sbjct: 35  RDYRQGQRRMHNLRRRARRLQRSLSAGPGRFQETLEQEIDPQTTLRLSMQERARLVPAEV 94

Query: 410 LYQSQRSDENHRVYLHQTEK 351
           LY+S+R   NHRVY H++E+
Sbjct: 95  LYRSRRDTVNHRVYTHRSEE 114


>emb|CAD59232.1| polyprotein [Cacao swollen shoot virus]
          Length = 1839

 Score =  150 bits (379), Expect(2) = 2e-50
 Identities = 71/117 (60%), Positives = 91/117 (77%)
 Frame = -3

Query: 354 EALRCXXXXXXXXXXXQAESFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDN 175
           E++ C           Q ES  +LQR G+ FIHIG++QVRIQILHR++EGT+ALV+FRDN
Sbjct: 109 ESVLCVGGSQVDRAFIQPESLEQLQRTGMSFIHIGILQVRIQILHRQEEGTMALVVFRDN 168

Query: 174 RWQGDQSIFATMEVDLTTEN*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
           RW GDQSIFA ME+DLT  + L++VIPDT+ TI DF +N+Q+SI TRGYENWQNG++
Sbjct: 169 RWSGDQSIFAQMEIDLTKGSQLVFVIPDTMMTIGDFARNVQLSILTRGYENWQNGEA 225



 Score = 77.0 bits (188), Expect(2) = 2e-50
 Identities = 37/78 (47%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
 Frame = -1

Query: 572 RRYRQGQRRLFTARRWAQRIFRG----RYNQTLERQISPDEQLQLSLRNRLHLVPTEILY 405
           R YR+GQRR+F  +R A+R+ R     RY +TLE++I P   L+LS++ R  LVP E+LY
Sbjct: 32  RDYRRGQRRIFNLQRRARRLRRSMMGSRYQETLEQEIDPQTTLRLSMQERARLVPAEVLY 91

Query: 404 QSQRSDENHRVYLHQTEK 351
           +S+R   +HRVY H++E+
Sbjct: 92  RSRRDTVHHRVYTHRSEE 109


>emb|CAG70342.1| CP, RT, RNaseH and protease polyprotein [Cacao swollen shoot Togo A
           virus]
          Length = 1868

 Score =  147 bits (372), Expect(2) = 3e-50
 Identities = 69/117 (58%), Positives = 91/117 (77%)
 Frame = -3

Query: 354 EALRCXXXXXXXXXXXQAESFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDN 175
           E++ C           Q ES  +LQR G+ FIHIG++QVRIQILHR++EGT+ALV+FRDN
Sbjct: 108 ESVLCIGNNQVDRAFIQPESLEQLQRTGMSFIHIGILQVRIQILHRQEEGTMALVVFRDN 167

Query: 174 RWQGDQSIFATMEVDLTTEN*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
           RW GDQSIFA ME+DLT  + L++V+PDT+ TI DF +N+Q+SI TRGYE+WQNG++
Sbjct: 168 RWTGDQSIFAQMEIDLTKGSQLVFVVPDTMMTIGDFARNVQLSILTRGYESWQNGEA 224



 Score = 79.0 bits (193), Expect(2) = 3e-50
 Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
 Frame = -1

Query: 572 RRYRQGQRRLFTARRWAQRIFRG----RYNQTLERQISPDEQLQLSLRNRLHLVPTEILY 405
           R YR+GQRR+F  RR A+R+ R     RY +TLE++I P   L+LS++ R  LVP E+LY
Sbjct: 31  RDYRRGQRRIFNLRRQARRLRRSVTGSRYQETLEQEIDPQTTLRLSMQERARLVPAEVLY 90

Query: 404 QSQRSDENHRVYLHQTEK 351
           +S+R   +HRVY H++E+
Sbjct: 91  RSRRDTVHHRVYTHRSEE 108


>gb|ATZ69449.1| ORF3 polyprotein [Cacao swollen shoot virus]
          Length = 1841

 Score =  150 bits (379), Expect(2) = 3e-50
 Identities = 71/117 (60%), Positives = 91/117 (77%)
 Frame = -3

Query: 354 EALRCXXXXXXXXXXXQAESFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDN 175
           E++ C           Q ES  +LQR G+ FIHIG++QVRIQILHR++EGT+ALV+FRDN
Sbjct: 109 ESVLCVGGNQVDRAFIQPESLEQLQRTGMSFIHIGILQVRIQILHRQEEGTMALVVFRDN 168

Query: 174 RWQGDQSIFATMEVDLTTEN*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
           RW GDQSIFA ME+DLT  + L++VIPDT+ TI DF +N+Q+SI TRGYENWQNG++
Sbjct: 169 RWSGDQSIFAQMEIDLTKGSQLVFVIPDTMMTIGDFARNVQLSILTRGYENWQNGEA 225



 Score = 76.3 bits (186), Expect(2) = 3e-50
 Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
 Frame = -1

Query: 572 RRYRQGQRRLFTARRWAQRIFRG----RYNQTLERQISPDEQLQLSLRNRLHLVPTEILY 405
           R YR+ QRR+F  RR A+R+ R     RY +TLE++I P   L+LS++ R  LVP E+LY
Sbjct: 32  RDYRRSQRRIFNLRRRARRLRRSMTGSRYQETLEQEIDPQTTLRLSMQERARLVPAEVLY 91

Query: 404 QSQRSDENHRVYLHQTEK 351
           +S+R   +HRVY H++E+
Sbjct: 92  RSRRDTVHHRVYTHRSEE 109


>emb|CAE81279.1| polyprotein [Cacao swollen shoot virus]
          Length = 1816

 Score =  150 bits (379), Expect(2) = 3e-50
 Identities = 71/117 (60%), Positives = 91/117 (77%)
 Frame = -3

Query: 354 EALRCXXXXXXXXXXXQAESFLELQRNGLQFIHIGLIQVRIQILHRRDEGTLALVIFRDN 175
           E++ C           Q ES  +LQR G+ FIHIG++QVRIQILHR++EGT+ALV+FRDN
Sbjct: 109 ESVLCVGGNQVDRAFIQPESLEQLQRTGMSFIHIGILQVRIQILHRQEEGTMALVVFRDN 168

Query: 174 RWQGDQSIFATMEVDLTTEN*LIYVIPDTITTIRDFYQNIQISIQTRGYENWQNGDS 4
           RW GDQSIFA ME+DLT  + L++VIPDT+ TI DF +N+Q+SI TRGYENWQNG++
Sbjct: 169 RWSGDQSIFAQMEIDLTKGSQLVFVIPDTMMTIGDFARNVQLSILTRGYENWQNGEA 225



 Score = 76.3 bits (186), Expect(2) = 3e-50
 Identities = 37/78 (47%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
 Frame = -1

Query: 572 RRYRQGQRRLFTARRWAQRIFRG----RYNQTLERQISPDEQLQLSLRNRLHLVPTEILY 405
           R YR+ QRR+F  RR A+R+ R     RY +TLE++I P   L+LS++ R  LVP E+LY
Sbjct: 32  RDYRRSQRRIFNLRRRARRLRRSMMGSRYQETLEQEIDPQTTLRLSMQERARLVPAEVLY 91

Query: 404 QSQRSDENHRVYLHQTEK 351
           +S+R   +HRVY H++E+
Sbjct: 92  RSRRDTVHHRVYTHRSEE 109