BLASTX nr result
ID: Cheilocostus21_contig00042325
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00042325
(464 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_018682727.1| PREDICTED: pentatricopeptide repeat-containi... 84 5e-16
ref|XP_010943720.2| PREDICTED: pentatricopeptide repeat-containi... 76 3e-13
ref|XP_008801246.2| PREDICTED: pentatricopeptide repeat-containi... 75 6e-13
gb|PHT80333.1| Pentatricopeptide repeat-containing protein [Caps... 67 4e-10
gb|PHT46596.1| Pentatricopeptide repeat-containing protein [Caps... 67 4e-10
ref|XP_006366808.1| PREDICTED: pentatricopeptide repeat-containi... 65 2e-09
ref|XP_015077221.1| PREDICTED: pentatricopeptide repeat-containi... 65 3e-09
gb|PHU16201.1| Pentatricopeptide repeat-containing protein [Caps... 65 3e-09
ref|XP_016566789.1| PREDICTED: pentatricopeptide repeat-containi... 65 4e-09
ref|XP_016577572.1| PREDICTED: pentatricopeptide repeat-containi... 65 4e-09
ref|XP_007158996.1| hypothetical protein PHAVU_002G199400g [Phas... 62 3e-08
ref|XP_015880494.1| PREDICTED: pentatricopeptide repeat-containi... 62 3e-08
gb|OIT39768.1| pentatricopeptide repeat-containing protein [Nico... 62 3e-08
ref|XP_009767912.1| PREDICTED: pentatricopeptide repeat-containi... 62 3e-08
ref|XP_015880493.1| PREDICTED: pentatricopeptide repeat-containi... 62 3e-08
ref|XP_019259555.1| PREDICTED: pentatricopeptide repeat-containi... 62 3e-08
ref|XP_016484075.1| PREDICTED: pentatricopeptide repeat-containi... 62 3e-08
ref|XP_009625829.1| PREDICTED: pentatricopeptide repeat-containi... 62 3e-08
ref|XP_023890955.1| LOW QUALITY PROTEIN: pentatricopeptide repea... 62 4e-08
ref|XP_021619344.1| pentatricopeptide repeat-containing protein ... 61 5e-08
>ref|XP_018682727.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Musa acuminata subsp. malaccensis]
ref|XP_018682728.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Musa acuminata subsp. malaccensis]
Length = 646
Score = 84.3 bits (207), Expect = 5e-16
Identities = 37/59 (62%), Positives = 47/59 (79%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIESRKVPGCSWI 286
++EIG YAAKC L++DP+D AA VMLSGVCAD+ +WD KA LR+ V S+KVPG SW+
Sbjct: 588 DLEIGMYAAKCTLELDPQDIAARVMLSGVCADIGLWDEKAGLREVVNQGSKKVPGSSWV 646
>ref|XP_010943720.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Elaeis guineensis]
ref|XP_019701629.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Elaeis guineensis]
Length = 654
Score = 76.3 bits (186), Expect = 3e-13
Identities = 36/59 (61%), Positives = 46/59 (77%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIESRKVPGCSWI 286
N+ IG AA+ IL+IDPED +AHVMLSGV A+ MWD +A +RD +K+ +KVPGCSWI
Sbjct: 596 NLGIGLNAARQILKIDPEDDSAHVMLSGVYANAGMWDERAGVRDFLKMGFKKVPGCSWI 654
>ref|XP_008801246.2| PREDICTED: pentatricopeptide repeat-containing protein At4g39530
[Phoenix dactylifera]
Length = 555
Score = 75.5 bits (184), Expect = 6e-13
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIESRKVPGCSWI 286
N+ IG YAA+ IL+IDPED +AHVMLSGV A MWD +A R +K+ +KVPGCSWI
Sbjct: 497 NLGIGLYAAEQILKIDPEDVSAHVMLSGVYAHAGMWDERAGARAVLKMGLKKVPGCSWI 555
>gb|PHT80333.1| Pentatricopeptide repeat-containing protein [Capsicum annuum]
Length = 871
Score = 67.4 bits (163), Expect = 4e-10
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIES-RKVPGCSWI 286
N+E+ AAKC+LQ+DPED ++H++LS + AD MW AE+R ++ RK PGCSWI
Sbjct: 745 NVEVAEKAAKCLLQLDPEDSSSHILLSNIYADAGMWKEVAEMRKVMRYGGLRKEPGCSWI 804
>gb|PHT46596.1| Pentatricopeptide repeat-containing protein [Capsicum baccatum]
Length = 897
Score = 67.4 bits (163), Expect = 4e-10
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIES-RKVPGCSWI 286
N+E+ AAKC+LQ+DPED ++H++LS + AD MW AE+R ++ RK PGCSWI
Sbjct: 771 NVEVAEKAAKCLLQLDPEDSSSHILLSNIYADAGMWKEVAEMRKVMRYGGLRKEPGCSWI 830
>ref|XP_006366808.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02330
[Solanum tuberosum]
Length = 894
Score = 65.5 bits (158), Expect = 2e-09
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIES-RKVPGCSWI 286
N+E+ AAKC+L++DPED ++H++LS + AD MW AE+R ++ +K PGCSWI
Sbjct: 768 NVEVAEKAAKCLLELDPEDSSSHILLSNIYADAGMWKEVAEMRKAMRYGGLKKEPGCSWI 827
>ref|XP_015077221.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02330
[Solanum pennellii]
Length = 857
Score = 65.1 bits (157), Expect = 3e-09
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIES-RKVPGCSWI 286
N+E+ AAKC+L++DPED ++H++LS + AD MW AE+R ++ +K PGCSWI
Sbjct: 743 NVEVAEKAAKCLLELDPEDSSSHILLSNIYADAGMWKEVAEMRKVMRYGGLKKEPGCSWI 802
>gb|PHU16201.1| Pentatricopeptide repeat-containing protein [Capsicum chinense]
Length = 871
Score = 65.1 bits (157), Expect = 3e-09
Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIES-RKVPGCSWI 286
N+E+ AAKC+LQ+DPED +++++LS + AD MW AE+R ++ RK PGCSWI
Sbjct: 745 NVEVAEKAAKCLLQLDPEDSSSYILLSNIYADAGMWKEVAEMRKVMRYGGLRKEPGCSWI 804
>ref|XP_016566789.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Capsicum annuum]
Length = 620
Score = 64.7 bits (156), Expect = 4e-09
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIES-RKVPGCSWI 286
N+ + AAKC+LQ+DPED ++H++LS + AD MW AE+R ++ RK PGCSWI
Sbjct: 494 NVMVAEKAAKCLLQLDPEDSSSHILLSNIYADAGMWKEVAEMRKVMRYGGLRKEPGCSWI 553
>ref|XP_016577572.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02330
[Capsicum annuum]
Length = 871
Score = 64.7 bits (156), Expect = 4e-09
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIES-RKVPGCSWI 286
N+ + AAKC+LQ+DPED ++H++LS + AD MW AE+R ++ RK PGCSWI
Sbjct: 745 NVMVAEKAAKCLLQLDPEDSSSHILLSNIYADAGMWKEVAEMRKVMRYGGLRKEPGCSWI 804
>ref|XP_007158996.1| hypothetical protein PHAVU_002G199400g [Phaseolus vulgaris]
gb|ESW30990.1| hypothetical protein PHAVU_002G199400g [Phaseolus vulgaris]
Length = 637
Score = 62.0 bits (149), Expect = 3e-08
Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIES-RKVPGCSWI 286
N+++ YAAK IL++DP+D A+V+LS + A+ W+ AE+R +KI RK PGCSWI
Sbjct: 449 NVDLATYAAKKILKLDPQDTGAYVLLSNIYANSKRWNEVAEVRRAMKIRGIRKEPGCSWI 508
>ref|XP_015880494.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02330
isoform X2 [Ziziphus jujuba]
Length = 744
Score = 62.0 bits (149), Expect = 3e-08
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIES-RKVPGCSWI 286
++E+ AA ILQ+DPED AA+V+LS + AD MW+ +++R+ ++ RK PGCSWI
Sbjct: 622 DVEVAEKAASSILQLDPEDSAAYVLLSNIYADSGMWNEMSKIRETMRSNKLRKEPGCSWI 681
>gb|OIT39768.1| pentatricopeptide repeat-containing protein [Nicotiana attenuata]
Length = 821
Score = 62.0 bits (149), Expect = 3e-08
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIES-RKVPGCSWI 286
N+E+ AAK +LQ+DPED ++H++LS + AD MW AE+R ++ +K PGCSWI
Sbjct: 695 NVEVAEKAAKFLLQLDPEDSSSHILLSNIYADAGMWKEVAEMRKVMRYGGLKKEPGCSWI 754
>ref|XP_009767912.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02330
[Nicotiana sylvestris]
Length = 842
Score = 62.0 bits (149), Expect = 3e-08
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIES-RKVPGCSWI 286
N+E+ AAK +LQ+DPED ++H++LS + AD MW AE+R ++ +K PGCSWI
Sbjct: 716 NVEVAEKAAKFLLQLDPEDSSSHILLSNIYADAGMWKEVAEMRKVMRYGGLKKEPGCSWI 775
>ref|XP_015880493.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02330
isoform X1 [Ziziphus jujuba]
Length = 852
Score = 62.0 bits (149), Expect = 3e-08
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIES-RKVPGCSWI 286
++E+ AA ILQ+DPED AA+V+LS + AD MW+ +++R+ ++ RK PGCSWI
Sbjct: 730 DVEVAEKAASSILQLDPEDSAAYVLLSNIYADSGMWNEMSKIRETMRSNKLRKEPGCSWI 789
>ref|XP_019259555.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02330
[Nicotiana attenuata]
Length = 870
Score = 62.0 bits (149), Expect = 3e-08
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIES-RKVPGCSWI 286
N+E+ AAK +LQ+DPED ++H++LS + AD MW AE+R ++ +K PGCSWI
Sbjct: 744 NVEVAEKAAKFLLQLDPEDSSSHILLSNIYADAGMWKEVAEMRKVMRYGGLKKEPGCSWI 803
>ref|XP_016484075.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Nicotiana tabacum]
Length = 873
Score = 62.0 bits (149), Expect = 3e-08
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIES-RKVPGCSWI 286
N+E+ AAK +LQ+DPED ++H++LS + AD MW AE+R ++ +K PGCSWI
Sbjct: 744 NVEVAEKAAKFLLQLDPEDSSSHILLSNIYADAGMWKEVAEMRKVMRYGGLKKEPGCSWI 803
>ref|XP_009625829.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02330
[Nicotiana tomentosiformis]
Length = 873
Score = 62.0 bits (149), Expect = 3e-08
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIES-RKVPGCSWI 286
N+E+ AAK +LQ+DPED ++H++LS + AD MW AE+R ++ +K PGCSWI
Sbjct: 744 NVEVAEKAAKFLLQLDPEDSSSHILLSNIYADAGMWKEVAEMRKVMRYGGLKKEPGCSWI 803
>ref|XP_023890955.1| LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein
At2g03880, mitochondrial [Quercus suber]
Length = 644
Score = 61.6 bits (148), Expect = 4e-08
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIES-RKVPGCSWI 286
N+++ +AAK IL++DPED +++LS + A+ WD AE+R +K + RK PGCSWI
Sbjct: 456 NVDLAIFAAKQILKLDPEDAGTYILLSNIYANSQRWDEVAEVRRTMKAKGVRKEPGCSWI 515
>ref|XP_021619344.1| pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Manihot esculenta]
Length = 296
Score = 60.8 bits (146), Expect = 5e-08
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = -3
Query: 462 NIEIGFYAAKCILQIDPEDFAAHVMLSGVCADMSMWDAKAELRDNVKIES-RKVPGCSWI 286
NI++G +AAK IL+ DP D AAH++LS + A WD AE+R N+K + K GCSWI
Sbjct: 124 NIDLGKHAAKMILEQDPNDPAAHILLSNLYASTGQWDEVAEIRKNMKERNLTKEAGCSWI 183